RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 EDARQ9UNE0 448 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 FLVCR1Q9Y5Y0 555 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 DCHS2Q6V1P9 2916 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 IGKV1D-42A0A075B6H8 117 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 NQO1P15559 274 aaKnown RBP17■□□□□ 0.31
SYNE4-202ENST00000340477 SELENOWP63302 87 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 ITGADQ13349 1161 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 KRT72Q14CN4 511 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 SFRP5Q5T4F7 317 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 FBXW9Q5XUX1 488 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 ANKRD34AQ69YU3 496 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 ZC3HAV1Q7Z2W4 902 aaKnown RBP17■□□□□ 0.31
SYNE4-202ENST00000340477 P3H2Q8IVL5 708 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 PGAM4Q8N0Y7 254 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 TAAR8Q969N4 342 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 TMEM45BQ96B21 275 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 ARL8BQ9NVJ2 186 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 FAM53CQ9NYF3 392 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 RPS6KA6Q9UK32 745 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 B3GALT5Q9Y2C3 310 aa17■□□□□ 0.31
SYNE4-202ENST00000340477 FREM1Q5H8C1 2179 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 FTCDNL1E5RQL4 147 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 M0R082 166 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 AKAP8O43823 692 aaKnown RBP16.99■□□□□ 0.31
SYNE4-202ENST00000340477 OR5F1O95221 314 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 MT-ATP6P00846 226 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 IFNW1P05000 195 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 ZNF43P17038 809 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 TNFRSF1BP20333 461 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 GRPRP30550 384 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 C1DQ13901 141 aaKnown RBP16.99■□□□□ 0.31
SYNE4-202ENST00000340477 POU4F3Q15319 338 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 SAMD4BQ5PRF9 694 aaKnown RBP16.99■□□□□ 0.31
SYNE4-202ENST00000340477 H1FNTQ75WM6 255 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-202ENST00000340477 BHLHA15Q7RTS1 189 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-202ENST00000340477 AAED1Q7RTV5 226 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 ABHD12BQ7Z5M8 362 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-202ENST00000340477 SCAIQ8N9R8 606 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 OR4D11Q8NGI4 311 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 ZNF417Q8TAU3 575 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 GEMIN6Q8WXD5 167 aaKnown RBP16.99■□□□□ 0.31
SYNE4-202ENST00000340477 SLC41A3Q96GZ6 507 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 ZNF587Q96SQ5 575 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-202ENST00000340477 ASB6Q9NWX5 421 aa16.99■□□□□ 0.31
SYNE4-202ENST00000340477 ANKRD17O75179 2603 aaKnown RBP16.98■□□□□ 0.31
SYNE4-202ENST00000340477 OR6C65A6NJZ3 312 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 KRT33AO76009 404 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 SERPINA1P01009 418 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 PTNP21246 168 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 CRYGSP22914 178 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 OR1E2P47887 323 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 IFI44LQ53G44 452 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 FKBP9P1Q75LS8 142 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 SSX8Q7RTT4 187 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 CDH24Q86UP0 819 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 LSRQ86X29 649 aaPredicted RBP16.98■□□□□ 0.31
SYNE4-202ENST00000340477 ADPRHL1Q8NDY3 354 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 S100PBPQ96BU1 408 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 SLC19A3Q9BZV2 496 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 NGBQ9NPG2 151 aa16.98■□□□□ 0.31
SYNE4-202ENST00000340477 GMPR2Q9P2T1 348 aaKnown RBP16.98■□□□□ 0.31
SYNE4-202ENST00000340477 CIB4A0PJX0 185 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 LYZL6O75951 148 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 OR6A2O95222 327 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 IGHV3-9P01782 118 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 THRBP10828 461 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 GGT1P19440 569 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 CBLP22681 906 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 PMS2P3Q13401 168 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 CBLL1Q75N03 491 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 WFDC8Q8IUA0 241 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 FITM2Q8N6M3 262 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 POMGNT2Q8NAT1 580 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 HSD17B8Q92506 261 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 PRRC1Q96M27 445 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 OXGR1Q96P68 337 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 TAS2R16Q9NYV7 291 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 MALT1Q9UDY8 824 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 MAGEL2Q9UJ55 1249 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 SAMD4AQ9UPU9 718 aaKnown RBP16.97■□□□□ 0.31
SYNE4-202ENST00000340477 TEX15Q9BXT5 2789 aa16.97■□□□□ 0.31
SYNE4-202ENST00000340477 FAM221AA4D161 298 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 KPNA4O00629 521 aaPredicted RBP16.96■□□□□ 0.31
SYNE4-202ENST00000340477 FZD7O75084 574 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 BGLAPP02818 100 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 HIST1H2ABP04908 130 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 NCK1P16333 377 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 COX5AP20674 150 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 HOXC12P31275 282 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 DNAJA1P31689 397 aaKnown RBP16.96■□□□□ 0.31
SYNE4-202ENST00000340477 RBM34P42696 430 aaKnown RBP16.96■□□□□ 0.31
SYNE4-202ENST00000340477 P2RY4P51582 365 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 KRTAP10-9P60411 292 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 SLC25A3Q00325 362 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 TGFBR3Q03167 851 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 FAPQ12884 760 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 STK11Q15831 433 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 BEX5Q5H9J7 111 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 ALKBH2Q6NS38 261 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 LINC00114Q6XXX2 140 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms