RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PRPS1P60891 318 aa15.56■□□□□ 0.08
HDDC3-201ENST00000330334 CDK6Q00534 326 aa15.56■□□□□ 0.08
HDDC3-201ENST00000330334 EGR4Q05215 589 aa15.56■□□□□ 0.08
HDDC3-201ENST00000330334 SQLEQ14534 574 aa15.56■□□□□ 0.08
HDDC3-201ENST00000330334 SLC22A25Q6T423 547 aa15.56■□□□□ 0.08
HDDC3-201ENST00000330334 GPAT4Q86UL3 456 aa15.56■□□□□ 0.08
HDDC3-201ENST00000330334 PIAS4Q8N2W9 510 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-201ENST00000330334 BHLHE22Q8NFJ8 381 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-201ENST00000330334 DNAJA4Q8WW22 397 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-201ENST00000330334 DYDC1Q8WWB3 177 aa15.56■□□□□ 0.08
HDDC3-201ENST00000330334 ZNF317Q96PQ6 595 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-201ENST00000330334 RSPO3Q9BXY4 272 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-201ENST00000330334 EVPLLA8MZ36 301 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 NR5A2O00482 541 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 OR2T1O43869 369 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 WNT11O96014 354 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 IGHV4-39P01824 125 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 PNMTP11086 282 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 CDKN1AP38936 164 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 NRF1Q16656 503 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 AGKQ53H12 422 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 ZNF544Q6NX49 715 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 DLEU7Q6UYE1 221 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 NET1Q7Z628 596 aaPredicted RBP15.55■□□□□ 0.08
HDDC3-201ENST00000330334 EPHX4Q8IUS5 362 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 ANKK1Q8NFD2 765 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 PTDSS2Q9BVG9 487 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 EVA1AQ9H8M9 152 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 VIPAS39Q9H9C1 493 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 CBLN4Q9NTU7 201 aa15.55■□□□□ 0.08
HDDC3-201ENST00000330334 INTS9Q9NV88 658 aaKnown RBP15.55■□□□□ 0.08
HDDC3-201ENST00000330334 LOC102725191A0A1B0GVB3 256 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 A0A1W2PR80 420 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 PRORSD1PA6NEY8 169 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 ELOA3DA6NLF2 546 aaPredicted RBP15.54■□□□□ 0.08
HDDC3-201ENST00000330334 SLC6A2P23975 617 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 HOXC5Q00444 222 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 ADRM1Q16186 407 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 ELOA3BQ3SY89 546 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 FAM91A1Q658Y4 838 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 C11orf71Q6IPW1 123 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 HDXQ7Z353 690 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 C10orf111Q8N326 155 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 ELOA3Q8NG57 546 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 NFKBIDQ8NI38 313 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 CKAP2Q8WWK9 683 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 MAGEB18Q96M61 343 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 ZNF607Q96SK3 696 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 LINC00470Q9BZP3 86 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 FKRPQ9H9S5 495 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 RPS6KB2Q9UBS0 482 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 POU2F3Q9UKI9 436 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 B3GALT5Q9Y2C3 310 aa15.54■□□□□ 0.08
HDDC3-201ENST00000330334 M0R1B8 84 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 SERPINB7O75635 380 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 KRT33AO76009 404 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 HOXB1P14653 301 aaPredicted RBP15.53■□□□□ 0.08
HDDC3-201ENST00000330334 VEZF1Q14119 521 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 FAM69AQ5T7M9 428 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 C9orf135Q5VTT2 229 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 ULK3Q6PHR2 472 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 FBXL14Q8N1E6 418 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 MUC15Q8N387 334 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 DPP10Q8N608 796 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 OR6S1Q8NH40 331 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 MAGEE2Q8TD90 523 aaPredicted RBP15.53■□□□□ 0.08
HDDC3-201ENST00000330334 TSPEARQ8WU66 669 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 SLC38A4Q969I6 547 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 KTI12Q96EK9 354 aaPredicted RBP15.53■□□□□ 0.08
HDDC3-201ENST00000330334 ADAD1Q96M93 576 aaKnown RBP15.53■□□□□ 0.08
HDDC3-201ENST00000330334 HS6ST2Q96MM7 605 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 OXGR1Q96P68 337 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 REG4Q9BYZ8 158 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 IKZF5Q9H5V7 419 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 MOV10Q9HCE1 1003 aaKnown RBP15.53■□□□□ 0.08
HDDC3-201ENST00000330334 RCE1Q9Y256 329 aa15.53■□□□□ 0.08
HDDC3-201ENST00000330334 A0A1B0GWA3 101 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 ZNF587BE7ETH6 402 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 RPL36A-HNRNPH2H7BZ11 118 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 ZNF432O94892 652 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 ZNF43P17038 809 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 HTR2AP28223 471 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 ACVR1BP36896 505 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 RPS5P46782 204 aaKnown RBP15.52■□□□□ 0.08
HDDC3-201ENST00000330334 SELENOPP49908 381 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 SH3BGRP55822 239 aaPredicted RBP15.52■□□□□ 0.08
HDDC3-201ENST00000330334 SLC25A3Q00325 362 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 SPOCK1Q08629 439 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 SCARB2Q14108 478 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 MFSD13AQ14CX5 517 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 C3orf36Q3SXR2 165 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 RUNDC3AQ59EK9 446 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 KLHL24Q6TFL4 600 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 COMTD1Q86VU5 262 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 LSRQ86X29 649 aaPredicted RBP15.52■□□□□ 0.08
HDDC3-201ENST00000330334 FAM169BQ8N8A8 192 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 HIPK4Q8NE63 616 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 TAAR8Q969N4 342 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 SLC25A36Q96CQ1 311 aa15.52■□□□□ 0.08
HDDC3-201ENST00000330334 SLC47A1Q96FL8 570 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms