RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 CBX7O95931 251 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 IFNGP01579 166 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 TSFMP43897 325 aaKnown RBP18.2■□□□□ 0.5
CRLF3-201ENST00000324238 SFRP5Q5T4F7 317 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 FAM199XQ6PEV8 388 aaPredicted RBP18.2■□□□□ 0.5
CRLF3-201ENST00000324238 C1orf216Q8TAB5 229 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 HERVK_113Q902F9 699 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 DHRS9Q9BPW9 319 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 ULBP3Q9BZM4 244 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 SCML1Q9UN30 329 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 WDFY3Q8IZQ1 3526 aa18.2■□□□□ 0.5
CRLF3-201ENST00000324238 MUC22E2RYF6 1773 aaPredicted RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 RPS10-NUDT3A0A1W2PQS6 291 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 FMO6PO60774 539 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 MAT1AQ00266 395 aaKnown RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 PSG6Q00889 435 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 NUDT18Q6ZVK8 323 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 SMIM4Q8WVI0 70 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 RGP1Q92546 391 aaPredicted RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 RERGQ96A58 199 aaPredicted RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 SRA1Q9HD15 236 aaKnown RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 NRIP3Q9NQ35 241 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 NANSQ9NR45 359 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 INPP5EQ9NRR6 644 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 HCN3Q9P1Z3 774 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 MGAT4CQ9UBM8 478 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 CHRNA9Q9UGM1 479 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 H0YC42 278 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 CYR61O00622 381 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 SMAD9O15198 467 aaKnown RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 PLRG1O43660 514 aaKnown RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 ARL6IP5O75915 188 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 FBXO45P0C2W1 286 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 SMIM10L1P0DMW3 83 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 NTSR1P30989 418 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 CCR4P51679 360 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 PITPNAQ00169 270 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 HSF2Q03933 536 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 TCTE1Q5JU00 501 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 YOD1Q5VVQ6 348 aaPredicted RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 OR4C3Q8NH37 302 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 OR56B4Q8NH76 319 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 TM4SF19Q96DZ7 209 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 SMIM10Q96HG1 83 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 BMFQ96LC9 184 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 Q96M85 177 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 DUSP22Q9NRW4 184 aa18.19■□□□□ 0.5
CRLF3-201ENST00000324238 DNAJB12Q9NXW2 375 aaKnown RBP18.19■□□□□ 0.5
CRLF3-201ENST00000324238 A0A1W2PQF6 199 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 GPR89AB7ZAQ6 455 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 PEX14O75381 377 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 MAS1P04201 325 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 GPR89BP0CG08 455 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 LCN1P31025 176 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 DLX2Q07687 328 aaPredicted RBP18.18■□□□□ 0.5
CRLF3-201ENST00000324238 GPR139Q6DWJ6 353 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 PARGQ86W56 976 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 SYNPRQ8TBG9 265 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 GAS2L1Q99501 681 aaPredicted RBP18.18■□□□□ 0.5
CRLF3-201ENST00000324238 HRASLS2Q9NWW9 162 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 KLHDC2Q9Y2U9 406 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 TMEM72A0PK05 275 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 C5orf67F2Z3F1 127 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 OGG1O15527 345 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 F13BP05160 661 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 STX4Q12846 297 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 LINC00303Q3SY05 128 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 FAM198BQ6UWH4 519 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 OR10AC1Q8NH08 325 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 ELMOD3Q96FG2 381 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 KLHDC3Q9BQ90 382 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 ABRACLQ9P1F3 81 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 PCDHGA5Q9Y5G8 931 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 FRYLO94915 3013 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 ATP1B1P05026 303 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 ARHGAP11AQ6P4F7 1023 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 POMZP3Q6PJE2 187 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 ABHD13Q7L211 337 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 CDH24Q86UP0 819 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 OR1F2PQ96R84 312 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 ZFYVE21Q9BQ24 234 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 RDH8Q9NYR8 311 aa18.18■□□□□ 0.5
CRLF3-201ENST00000324238 TRAV1-2A0A0B4J238 106 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 LINC00862A6NCI5 91 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 IFITM5A6NNB3 132 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 C17orf51A8MQB3 221 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 M0R233 179 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 SPI1P17947 270 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 PSMB1P20618 241 aaKnown RBP18.17■□□□□ 0.5
CRLF3-201ENST00000324238 ACTC1P68032 377 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 ACTA1P68133 377 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 TRAM1Q15629 374 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 OR5M10Q6IEU7 315 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 NT5CQ8TCD5 201 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 ANKRD9Q96BM1 317 aaPredicted RBP18.17■□□□□ 0.5
CRLF3-201ENST00000324238 NOX3Q9HBY0 568 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 FAM60AQ9NP50 221 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 OR7A10O76100 309 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 NDUFB2O95178 105 aa18.17■□□□□ 0.5
CRLF3-201ENST00000324238 AQP2P41181 271 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms