RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 IP6K3Q96PC2 410 aa20.53■□□□□ 0.88
CDX1-201ENST00000231656 ERMAPQ96PL5 475 aaPredicted RBP20.53■□□□□ 0.88
CDX1-201ENST00000231656 SECISBP2Q96T21 854 aaKnown RBP20.53■□□□□ 0.88
CDX1-201ENST00000231656 SLC22A31A6NKX4 558 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 C17orf51A8MQB3 221 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 HCRTR2O43614 444 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 NDUFB5O43674 189 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 IFNGP01579 166 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 SERPINA7P05543 415 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 TSPAN19P0C672 248 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 BMP4P12644 408 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 ATP6V1E1P36543 226 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 CHAF1BQ13112 559 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 EFR3AQ14156 821 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 TBC1D25Q3MII6 688 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 IGFN1Q86VF2 1251 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 KLHL36Q8N4N3 616 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 TEAD3Q99594 435 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 TBL1XR1Q9BZK7 514 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 WDR12Q9GZL7 423 aaKnown RBP20.52■□□□□ 0.88
CDX1-201ENST00000231656 EXOSC4Q9NPD3 245 aaKnown RBP20.52■□□□□ 0.88
CDX1-201ENST00000231656 SF3B6Q9Y3B4 125 aaKnown RBP20.52■□□□□ 0.88
CDX1-201ENST00000231656 ZFHX4Q86UP3 3567 aa20.52■□□□□ 0.88
CDX1-201ENST00000231656 ADAM10O14672 748 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 LALBAP00709 142 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 SPINK2P20155 84 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 PAICSP22234 425 aaKnown RBP20.51■□□□□ 0.87
CDX1-201ENST00000231656 TACR3P29371 465 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 TMED10P49755 219 aaKnown RBP20.51■□□□□ 0.87
CDX1-201ENST00000231656 EGR4Q05215 589 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 DBPQ10586 325 aaPredicted RBP20.51■□□□□ 0.87
CDX1-201ENST00000231656 ZNF74Q16587 644 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 KLHL12Q53G59 568 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 DPY19L2P2Q6ZN68 376 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 RPS19BP1Q86WX3 136 aaKnown RBP20.51■□□□□ 0.87
CDX1-201ENST00000231656 ARMC10Q8N2F6 343 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 CYB561A3Q8NBI2 242 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 ZNF563Q8TA94 476 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 CDCP1Q9H5V8 836 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 YARS2Q9Y2Z4 477 aaKnown RBP20.51■□□□□ 0.87
CDX1-201ENST00000231656 PCNX3Q9H6A9 2034 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 FBXO45P0C2W1 286 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 CLUP10909 449 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 EVI2BP34910 448 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 ACSM1Q08AH1 577 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 SRSF6Q13247 344 aaKnown RBP20.51■□□□□ 0.87
CDX1-201ENST00000231656 ZNF791Q3KP31 576 aaPredicted RBP20.51■□□□□ 0.87
CDX1-201ENST00000231656 GXYLT1Q4G148 440 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 DCAF10Q5QP82 559 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 H3F3CQ6NXT2 135 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 TMEM99Q8N816 258 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 UFD1Q92890 307 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 SCNM1Q9BWG6 230 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 OR51V1Q9H2C8 321 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 KLHL21Q9UJP4 597 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 SSR3Q9UNL2 185 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 WASF3Q9UPY6 502 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 IER3IP1Q9Y5U9 82 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 MED13Q9UHV7 2174 aa20.51■□□□□ 0.87
CDX1-201ENST00000231656 HIST1H1CP16403 213 aaKnown RBP20.5■□□□□ 0.87
CDX1-201ENST00000231656 MLF1P58340 268 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 C16orf87Q6PH81 154 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 ZNF322Q6U7Q0 402 aaPredicted RBP20.5■□□□□ 0.87
CDX1-201ENST00000231656 BTLAQ7Z6A9 289 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 ACBD7Q8N6N7 88 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 OR52E2Q8NGJ4 325 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 OR5W2Q8NH69 310 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 HGDQ93099 445 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 GPX7Q96SL4 187 aaPredicted RBP20.5■□□□□ 0.87
CDX1-201ENST00000231656 ASPNQ9BXN1 380 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 NRIP3Q9NQ35 241 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 HAO2Q9NYQ3 351 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 B3GNT3Q9Y2A9 372 aa20.5■□□□□ 0.87
CDX1-201ENST00000231656 C12orf71A8MTZ7 269 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 ZNF670-ZNF695F2Z2N8 137 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 RPS25P62851 125 aaKnown RBP20.49■□□□□ 0.87
CDX1-201ENST00000231656 CLN3Q13286 438 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 TOMM34Q15785 309 aaPredicted RBP20.49■□□□□ 0.87
CDX1-201ENST00000231656 NUP54Q7Z3B4 507 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 MOSPD2Q8NHP6 518 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 SPRYD4Q8WW59 207 aaPredicted RBP20.49■□□□□ 0.87
CDX1-201ENST00000231656 TMCO6Q96DC7 493 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 SPACA9Q96E40 222 aaPredicted RBP20.49■□□□□ 0.87
CDX1-201ENST00000231656 MOGAT1Q96PD6 335 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 TIMP4Q99727 224 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 HIF3AQ9Y2N7 669 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 ADAM18Q9Y3Q7 739 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 ARPC3O15145 178 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 SCO2O43819 266 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 RPL4P36578 427 aaKnown RBP20.49■□□□□ 0.87
CDX1-201ENST00000231656 PRPS1P60891 318 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 RPS7P62081 194 aaKnown RBP20.49■□□□□ 0.87
CDX1-201ENST00000231656 LTBQ06643 244 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 NTRK2Q16620 822 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 ATP1A1-AS1Q5TC04 95 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 SDR9C7Q8NEX9 313 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 OR4K13Q8NH42 304 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 FNDC8Q8TC99 324 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 PSMF1Q92530 271 aa20.49■□□□□ 0.87
CDX1-201ENST00000231656 TTC9Q92623 222 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms