RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PTPRBP23467 1997 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 CDRT15L2A8MXV6 281 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 ZNF208O43345 1280 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 GABARAPO95166 117 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 CCL3P10147 92 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 CEACAM1P13688 526 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 CD36P16671 472 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.42■□□□□ 0.22
VIM-201ENST00000224237 C1DQ13901 141 aaKnown RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 C1QL3Q5VWW1 255 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 JMJD6Q6NYC1 403 aaPredicted RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 SLC16A12Q6ZSM3 486 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 SIRT6Q8N6T7 355 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 FAM98AQ8NCA5 519 aaKnown RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 SDR9C7Q8NEX9 313 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 OR4K13Q8NH42 304 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 DDIT4LQ96D03 193 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 OR5M11Q96RB7 305 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 HCAR1Q9BXC0 346 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 KLHL1Q9NR64 748 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 IL17BQ9UHF5 180 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 FBXL2Q9UKC9 423 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 LSM2Q9Y333 95 aaKnown RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 CPAMD8Q8IZJ3 1885 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 IMPA2O14732 288 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 APOL3O95236 402 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 ATE1O95260 518 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 HSMCR30P0CW71 290 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 ATP6V1E1P36543 226 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 TGFBR2P37173 567 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 LIPAP38571 399 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 CTXN1P60606 82 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 ERVK-25P63136 954 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 INPP5JQ15735 1006 aaPredicted RBP16.41■□□□□ 0.22
VIM-201ENST00000224237 SGCBQ16585 318 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 KLHL12Q53G59 568 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 ARMCX4Q5H9R4 360 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 ACER2Q5QJU3 275 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 FAM122BQ7Z309 247 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 PLCZ1Q86YW0 608 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 CYB561A3Q8NBI2 242 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 OR5J2Q8NH18 312 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 C1GALT1C1Q96EU7 318 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 MGLLQ99685 303 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 NPAS1Q99742 590 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 OR11A1Q9GZK7 315 aa16.41■□□□□ 0.22
VIM-201ENST00000224237 ANKRD33BA6NCL7 494 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 SLC2A5P22732 501 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 SDHAP31040 664 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 RPS7P62081 194 aaKnown RBP16.4■□□□□ 0.22
VIM-201ENST00000224237 SPHARQ15513 63 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 TGIF1Q15583 401 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 B3GNTL1Q67FW5 361 aaPredicted RBP16.4■□□□□ 0.22
VIM-201ENST00000224237 DTX1Q86Y01 620 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 PSD4Q8NDX1 1056 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 OR4F15Q8NGB8 312 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 SLC25A36Q96CQ1 311 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 NTNG2Q96CW9 530 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 OR51V1Q9H2C8 321 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 TNFRSF10DQ9UBN6 386 aa16.4■□□□□ 0.22
VIM-201ENST00000224237 TMEM129A0AVI4 362 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 IGHA1P01876 353 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 ADH6P28332 368 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 EIF1P41567 113 aaKnown RBP16.39■□□□□ 0.22
VIM-201ENST00000224237 ETV1P50549 477 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 MFSD13AQ14CX5 517 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 CTF1Q16619 201 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 EMC4Q5J8M3 183 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 ZNF468Q5VIY5 522 aaPredicted RBP16.39■□□□□ 0.22
VIM-201ENST00000224237 SHFQ7M4L6 423 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 GPALPP1Q8IXQ4 340 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 OR51G2Q8NGK0 314 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 KISS1RQ969F8 398 aaPredicted RBP16.39■□□□□ 0.22
VIM-201ENST00000224237 THOC3Q96J01 351 aaKnown RBP16.39■□□□□ 0.22
VIM-201ENST00000224237 TEAD3Q99594 435 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 JAM3Q9BX67 310 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 ASPNQ9BXN1 380 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 SERINC1Q9NRX5 453 aa16.39■□□□□ 0.22
VIM-201ENST00000224237 SPIN1Q9Y657 262 aaPredicted RBP16.39■□□□□ 0.22
VIM-201ENST00000224237 A0A087WZY1 265 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 TEX13CA0A0J9YWL9 993 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 CCDC182A6NF36 153 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 SNPHO15079 494 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 SNX4O95219 450 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 TXNDC12O95881 172 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 F13BP05160 661 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 GRPRP30550 384 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 SLC16A1P53985 500 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 DCAF10Q5QP82 559 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 SLC6A19Q695T7 634 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 C3orf33Q6P1S2 294 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 PAQR6Q6TCH4 344 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 POC1BQ8TC44 478 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 PSMF1Q92530 271 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 KIAA1143Q96AT1 154 aaPredicted RBP16.39■□□□□ 0.21
VIM-201ENST00000224237 ZBTB8AQ96BR9 441 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 RASD2Q96D21 266 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 DNAJA3Q96EY1 480 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 PROK2Q9HC23 129 aa16.39■□□□□ 0.21
VIM-201ENST00000224237 HAO2Q9NYQ3 351 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms