RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 NEDD8Q15843 81 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 FAM69AQ5T7M9 428 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 AADACL4Q5VUY2 407 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 XAF1Q6GPH4 301 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 MDGA2Q7Z553 956 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 BCDIN3DQ7Z5W3 292 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 OR1J4Q8NGS1 313 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 FNDC8Q8TC99 324 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 RFKQ969G6 155 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 PTDSS2Q9BVG9 487 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 SERINC1Q9NRX5 453 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 ANKRD10Q9NXR5 420 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 BLOC1S5-TXNDC5H3BN57 136 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 CDK2AP1O14519 115 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 IDH3BO43837 385 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 AHSA1O95433 338 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 SLC2A10O95528 541 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 TSPAN19P0C672 248 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 DBTP11182 482 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 ADH6P28332 368 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 TTKP33981 857 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 RPL4P36578 427 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 RRADP55042 308 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 MVKQ03426 396 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 PMS2P3Q13401 168 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 SLC35F1Q5T1Q4 408 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 C1QL3Q5VWW1 255 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 ARHGAP11AQ6P4F7 1023 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 MAMDC2Q7Z304 686 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 GPR141Q7Z602 305 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 TMIGD2Q96BF3 282 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 ZBTB8AQ96BR9 441 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 DDIT4LQ96D03 193 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 ERMAPQ96PL5 475 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 GPX7Q96SL4 187 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 NPAS1Q99742 590 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 WDR70Q9NW82 654 aa15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 H2AFY2Q9P0M6 372 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-224ENST00000600718 RIIAD1A6NNX1 92 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 M0R3G1 203 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 DLL1O00548 723 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 ARPC3O15145 178 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 IFNGP01579 166 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 STSP08842 583 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 NOS3P29474 1203 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 UQCRC1P31930 480 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 CASRP41180 1078 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 AQP2P41181 271 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 OC90Q02509 493 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF91Q05481 1191 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 NXNL2Q5VZ03 156 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 TIGD3Q6B0B8 471 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 NANOGNBQ7Z5D8 188 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 VASH2Q86V25 355 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 POC1BQ8TC44 478 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 POTEKPQ9BYX7 375 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 SLC6A5Q9Y345 797 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 MCIDASD6RGH6 385 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 TRIM3O75382 744 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 CBR3O75828 277 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 FKBP2P26885 142 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 DSCR4P56555 118 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 TMED1Q13445 227 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 RSPO4Q2I0M5 234 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 KLHL22Q53GT1 634 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF362Q5T0B9 420 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 CXXC5Q7LFL8 322 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF227Q86WZ6 799 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 CPOQ8IVL8 374 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 PSD4Q8NDX1 1056 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 MOSPD2Q8NHP6 518 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 UTP23Q9BRU9 249 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 OR11A1Q9GZK7 315 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 NRIP3Q9NQ35 241 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 HINT3Q9NQE9 182 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 MRPS18AQ9NVS2 196 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 KLHL21Q9UJP4 597 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 IER3IP1Q9Y5U9 82 aa15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 SPIN1Q9Y657 262 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-224ENST00000600718 IRGMA1A4Y4 181 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 TRABD2BA6NFA1 517 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 APEHP13798 732 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 C21orf33P30042 268 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 CD96P40200 585 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 SOX8P57073 446 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 MFSD13AQ14CX5 517 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 ALG10Q5BKT4 473 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 IGFN1Q86VF2 1251 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 GID4Q8IVV7 300 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 LRRC75AQ8NAA5 344 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 ABTB1Q969K4 478 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 MUL1Q969V5 352 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 SLC25A36Q96CQ1 311 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 NXPE2Q96DL1 559 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 CDCA4Q9BXL8 241 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 ACOT13Q9NPJ3 140 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 FAIMQ9NVQ4 179 aa15.95■□□□□ 0.14
SHKBP1-224ENST00000600718 LRFN1Q9P244 771 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms