RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SERPINA11Q86U17 422 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 OR8J3Q8NGG0 315 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 GTPBP3Q969Y2 492 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 PSD2Q9BQI7 771 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 TRIM2Q9C040 744 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 GRIP2Q9C0E4 1043 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 SLCO5A1Q9H2Y9 848 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 KLHL9Q9P2J3 617 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 ING1Q9UK53 422 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 ANK3Q12955 4377 aaKnown RBP15.52■□□□□ 0.07
SHKBP1-203ENST00000594298 TLN2Q9Y4G6 2542 aa15.52■□□□□ 0.07
SHKBP1-203ENST00000594298 ROS1P08922 2347 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 USF3Q68DE3 2245 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 DPRXA6NFQ7 191 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 SNX3O60493 162 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 BCAS1O75363 584 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 DRD4P21917 467 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 PRKAR1BP31321 381 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 CDKN1AP38936 164 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 SLC1A3P43003 542 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 OR3A2P47893 321 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 POLR2HP52434 150 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 BSPH1Q075Z2 132 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 INTS11Q5TA45 600 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 NANOGP8Q6NSW7 305 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 BHLHA15Q7RTS1 189 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 SSX8Q7RTT4 187 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 ATG4DQ86TL0 474 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 MTDHQ86UE4 582 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 MAPK1IP1LQ8NDC0 245 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 KBTBD8Q8NFY9 601 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 NEUROG1Q92886 237 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 ECSITQ9BQ95 431 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 CCDC106Q9BWC9 280 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 KAT8Q9H7Z6 458 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 EVA1AQ9H8M9 152 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 NANOGQ9H9S0 305 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 RLIMQ9NVW2 624 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 ARMCX1Q9P291 453 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 CHRNA9Q9UGM1 479 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 SLC13A4Q9UKG4 626 aa15.51■□□□□ 0.07
SHKBP1-203ENST00000594298 TLX2O43763 284 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 IGHV4-39P01824 125 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 TFPIP10646 304 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 GYS2P54840 703 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 ADRM1Q16186 407 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 WBP2NLQ6ICG8 309 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 DHRS4L2Q6PKH6 230 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 DTX2Q86UW9 622 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 C10orf111Q8N326 155 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 CLIP4Q8N3C7 705 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 OR10A6Q8NH74 314 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 ZNF524Q96C55 264 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 OR5B2Q96R09 309 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 TRAF4Q9BUZ4 470 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 BARX1Q9HBU1 254 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 CTPS2Q9NRF8 586 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 AP3M1Q9Y2T2 418 aa15.5■□□□□ 0.07
SHKBP1-203ENST00000594298 FBN1P35555 2871 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 AP3D1O14617 1153 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 CD5LO43866 347 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 CYTIPO60759 359 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 CD8AP01732 235 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 TP53P04637 393 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 GKN3PP0CG01 181 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 COX4I1P13073 169 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 ACVR1BP36896 505 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 CSNK2A1P68400 391 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 PLAURQ03405 335 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 SELPLGQ14242 412 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 SYT14P1Q58G82 188 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 NET1Q7Z628 596 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 PATL1Q86TB9 770 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 PTOV1Q86YD1 416 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 ARMC8Q8IUR7 673 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 DDIT4LQ96D03 193 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 CMTM5Q96DZ9 223 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 REPIN1Q9BWE0 567 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 EFCAB1Q9HAE3 211 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 HDGFL3Q9Y3E1 203 aa15.49■□□□□ 0.07
SHKBP1-203ENST00000594298 TMED7-TICAM2A0A0A6YYA0 188 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 IGHV3-15A0A0B4J1V0 119 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 A0A1W2PNR3 127 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ZNF724A8MTY0 619 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 SMAD9O15198 467 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ZNF208O43345 1280 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ADAM11O75078 769 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 COX5AP20674 150 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 CXCR1P25024 350 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 TACR3P29371 465 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ACAA2P42765 397 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 FAPQ12884 760 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 PPA1Q15181 289 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 TIMM23BQ5SRD1 257 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ERICH5Q6P6B1 374 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 TMPPEQ6ZT21 453 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ARPINQ7Z6K5 226 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 P2RY8Q86VZ1 359 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ADGRG3Q86Y34 549 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 CADM2Q8N3J6 435 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms