RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 PAQR6Q6TCH4 344 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 GPAT4Q86UL3 456 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 ZNF611Q8N823 705 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 OR9K2Q8NGE7 335 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 SLC25A36Q96CQ1 311 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 KTI12Q96EK9 354 aaPredicted RBP9.34□□□□□ -0.91
NELFE-213ENST00000494956 NAA11Q9BSU3 229 aaPredicted RBP9.34□□□□□ -0.91
NELFE-213ENST00000494956 PTDSS2Q9BVG9 487 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 RAD21L1Q9H4I0 556 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 VIPAS39Q9H9C1 493 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 ARGLU1Q9NWB6 273 aaPredicted RBP9.34□□□□□ -0.91
NELFE-213ENST00000494956 ASB6Q9NWX5 421 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 THUMPD1Q9NXG2 353 aaKnown RBP9.34□□□□□ -0.91
NELFE-213ENST00000494956 IFT52Q9Y366 437 aa9.34□□□□□ -0.91
NELFE-213ENST00000494956 HEATR1Q9H583 2144 aaKnown RBP9.34□□□□□ -0.91
NELFE-213ENST00000494956 A0A1W2PP18 115 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 OR5H1A6NKK0 313 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 AQP7P3A6NL99 342 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 A8MVM7 634 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 PDLIM1O00151 329 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 GPR171O14626 319 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 DNPH1O43598 174 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 TPST2O60704 377 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 EIF1BO60739 113 aaKnown RBP9.33□□□□□ -0.92
NELFE-213ENST00000494956 NPIPB7O75200 414 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 NDUFS7O75251 213 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 GPIP06744 558 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 INHBBP09529 407 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 ETS2P15036 469 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 GPX2P18283 190 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 FKBP2P26885 142 aaKnown RBP9.33□□□□□ -0.92
NELFE-213ENST00000494956 SELENOPP49908 381 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 DMTNQ08495 405 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 GABRA6Q16445 453 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 PGGHGQ32M88 737 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 ZNF672Q499Z4 452 aaPredicted RBP9.33□□□□□ -0.92
NELFE-213ENST00000494956 TIMM23BQ5SRD1 257 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
NELFE-213ENST00000494956 REEP3Q6NUK4 255 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 AAED1Q7RTV5 226 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 DHDDSQ86SQ9 333 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 PTOV1Q86YD1 416 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 LRRC75A-AS1Q8N1F1 130 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 WDR31Q8NA23 367 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 SMYD1Q8NB12 490 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 TMEM171Q8WVE6 324 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 FBXW5Q969U6 566 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 C18orf12Q96KH6 178 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 TAPBPLQ9BX59 468 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 TRIM2Q9C040 744 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 PIF1Q9H611 641 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 ESRP2Q9H6T0 727 aaKnown RBP9.33□□□□□ -0.92
NELFE-213ENST00000494956 CACYBPQ9HB71 228 aaKnown RBP9.33□□□□□ -0.92
NELFE-213ENST00000494956 ZNF446Q9NWS9 450 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 UPB1Q9UBR1 384 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 MALT1Q9UDY8 824 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 MAGED1Q9Y5V3 778 aaPredicted RBP9.33□□□□□ -0.92
NELFE-213ENST00000494956 SLC25A15Q9Y619 301 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 MTORP42345 2549 aa9.33□□□□□ -0.92
NELFE-213ENST00000494956 SETD2Q9BYW2 2564 aaPredicted RBP9.32□□□□□ -0.92
NELFE-213ENST00000494956 IGKV1D-42A0A075B6H8 117 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 A0A1B0GWA3 101 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 ELOA3DA6NLF2 546 aaPredicted RBP9.32□□□□□ -0.92
NELFE-213ENST00000494956 FTCDNL1E5RQL4 147 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 M0R1B8 84 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 M0R3H8 397 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 FBP2O00757 339 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 ABCD4O14678 606 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 ARHGEF9O43307 516 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 AHSA1O95433 338 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 CNOT4O95628 575 aaKnown RBP9.32□□□□□ -0.92
NELFE-213ENST00000494956 CD8AP01732 235 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 DANCRP0C864 163 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 PNMTP11086 282 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 HOXB4P17483 251 aaPredicted RBP9.32□□□□□ -0.92
NELFE-213ENST00000494956 PRKAR1BP31321 381 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 ATP5J2P56134 94 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 ELOA3BQ3SY89 546 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 PRAMEF8Q5VWM4 474 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 PRAMEF7Q5VXH5 474 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 TMEM225Q6GV28 225 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 CGB2Q6NT52 195 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 DHRS4L2Q6PKH6 230 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 B3GLCTQ6Y288 498 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 LINGO2Q7L985 606 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 EPHX4Q8IUS5 362 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 ELOA3Q8NG57 546 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 RNF217Q8TC41 542 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 SMAP2Q8WU79 429 aaPredicted RBP9.32□□□□□ -0.92
NELFE-213ENST00000494956 TAAR8Q969N4 342 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 MUCL1Q96DR8 90 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 CGREF1Q99674 301 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 TMEM120AQ9BXJ8 343 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 GSX2Q9BZM3 304 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 TAS2R16Q9NYV7 291 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 LEF1Q9UJU2 399 aaPredicted RBP9.32□□□□□ -0.92
NELFE-213ENST00000494956 USP22Q9UPT9 525 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 SLC9A8Q9Y2E8 581 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 NDUFAF1Q9Y375 327 aa9.32□□□□□ -0.92
NELFE-213ENST00000494956 EVPLLA8MZ36 301 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms