RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ERGIC2Q96RQ1 377 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 CD180Q99467 661 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 VAT1Q99536 393 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 NDUFAF3Q9BU61 184 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 DCSTAMPQ9H295 470 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 FZD8Q9H461 694 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 Q9H521 79 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 PLEKHA2Q9HB19 425 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 HHATLQ9HCP6 504 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 POLE4Q9NR33 117 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 CYSLTR2Q9NS75 346 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 BEX4Q9NWD9 120 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 SIDT1Q9NXL6 827 aaKnown RBP4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 GPR83Q9NYM4 423 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 DHCR7Q9UBM7 475 aaKnown RBP4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 FBXL17Q9UF56 701 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC25A13Q9UJS0 675 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 NPIPA1Q9UND3 350 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 FBXO7Q9Y3I1 522 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 HEMK1Q9Y5R4 338 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 KPTNQ9Y664 436 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 PCM1Q15154 2024 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 TAF1P21675 1872 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 NAV1Q8NEY1 1877 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 RGPD3A6NKT7 1758 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 RGPD4Q7Z3J3 1758 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 WDR90Q96KV7 1748 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 A0A0D9SFI3 127 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CENPVL1A0A0U1RR11 272 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 A0A1B0GTI1 187 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 A0A1W2PQF6 199 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 HYKKA2RU49 373 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TBC1D3BA6NDS4 549 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 G3V3Y1 287 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 H3BSA7 217 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 M0QYT0 321 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 KLF11O14901 512 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SIVA1O15304 175 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SELENOFO60613 162 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 LRP3O75074 770 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 GLSO94925 669 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TTC4O95801 387 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 GLP2RO95838 553 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 ACTL6AO96019 429 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 FGGP02679 453 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 MMP1P03956 469 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 ALDOAP04075 364 aaKnown RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 JUNP05412 331 aaKnown RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TSPAN19P0C672 248 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 IL7P13232 177 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 IL2RBP14784 551 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 HIST1H1BP16401 226 aaKnown RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 NPR2P20594 1047 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 EFNA1P20827 205 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 PCMT1P22061 227 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CBLP22681 906 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 UQCRC2P22695 453 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CA4P22748 312 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 IL12AP29459 219 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TIA1P31483 386 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SSTR5P35346 364 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 ADRA1AP35348 466 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 IFNGR2P38484 337 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 AKR1C3P42330 323 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 WASP42768 502 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CDH11P55287 796 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 RAB2AP61019 212 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM3AP98173 230 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 ROM1Q03395 351 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TWF1Q12792 350 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 MAPK11Q15759 364 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 GUCA2BQ16661 112 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CYP1B1Q16678 543 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 C6orf52Q5T4I8 152 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TBC1D3GQ6DHY5 549 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 ATRAIDQ6UW56 229 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 IZUMO2Q6UXV1 221 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 BAIAP2L2Q6UXY1 529 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 QSOX2Q6ZRP7 698 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 C11orf57Q6ZUT1 292 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM179Q6ZVK1 233 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 ARPINQ7Z6K5 226 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CMTM4Q8IZR5 234 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 GABRG1Q8N1C3 465 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CERS5Q8N5B7 392 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 FBXO36Q8NEA4 188 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR6M1Q8NGM8 313 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 COQ8AQ8NI60 647 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM239Q8WW34 195 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TCTEX1D2Q8WW35 142 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SUSD6Q92537 303 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 KAT5Q92993 513 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 PIGTQ969N2 578 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CTHRC1Q96CG8 243 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TM4SF19Q96DZ7 209 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 COQ2Q96H96 371 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SFRP2Q96HF1 295 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 KLHL32Q96NJ5 620 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms