RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 OTULINQ96BN8 352 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 COG8Q96MW5 612 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 FRMD6Q96NE9 622 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 FGF20Q9NP95 211 aaPredicted RBP16.45■□□□□ 0.22
VIM-201ENST00000224237 NRIP3Q9NQ35 241 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 KLHL21Q9UJP4 597 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 VDAC3Q9Y277 283 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 ARPC3O15145 178 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 BGLAPP02818 100 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 HIST1H2ABP04908 130 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 PAICSP22234 425 aaKnown RBP16.44■□□□□ 0.22
VIM-201ENST00000224237 GXYLT1Q4G148 440 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 ZNF362Q5T0B9 420 aaPredicted RBP16.44■□□□□ 0.22
VIM-201ENST00000224237 H3F3CQ6NXT2 135 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 ARSKQ6UWY0 536 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 HIST3H2AQ7L7L0 130 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 IGFN1Q86VF2 1251 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 PAQR8Q8TEZ7 354 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 HIST1H2ACQ93077 130 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 YIPF6Q96EC8 236 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 MND1Q9BWT6 205 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 ENPP5Q9UJA9 477 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 IER3IP1Q9Y5U9 82 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 CELSR3Q9NYQ7 3312 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 ZC3H12DA2A288 527 aaKnown RBP16.44■□□□□ 0.22
VIM-201ENST00000224237 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.44■□□□□ 0.22
VIM-201ENST00000224237 IDH3BO43837 385 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 WISP1O95388 367 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 TSPAN19P0C672 248 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 MYL12AP19105 171 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 UQCRC1P31930 480 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 AQP2P41181 271 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 MAP2K6P52564 334 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 ITGADQ13349 1161 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 TMED1Q13445 227 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 CRMP1Q14194 572 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 MED22Q15528 200 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 ALG10Q5BKT4 473 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 SLC25A53Q5H9E4 307 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 ARMC4Q5T2S8 1044 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 PRAMEF20Q5VT98 475 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 MRGPRX4Q96LA9 322 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 SH3GL3Q99963 347 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 BCL7BQ9BQE9 202 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 PTDSS2Q9BVG9 487 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 PTGES2Q9H7Z7 377 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 SH2D2AQ9NP31 389 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 SLC6A5Q9Y345 797 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 HRH3Q9Y5N1 445 aa16.44■□□□□ 0.22
VIM-201ENST00000224237 TRIM64BA6NI03 449 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 SLC22A31A6NKX4 558 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 TM4SF5O14894 197 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 MYL12BO14950 172 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 OR2T1O43869 369 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 AHSA1O95433 338 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 HIST1H1CP16403 213 aaKnown RBP16.43■□□□□ 0.22
VIM-201ENST00000224237 NOVA1P51513 510 aaKnown RBP16.43■□□□□ 0.22
VIM-201ENST00000224237 FOXF1Q12946 379 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 PLPPR5Q32ZL2 321 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 C1orf140Q5VVS0 124 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 MEPCEQ7L2J0 689 aaKnown RBP16.43■□□□□ 0.22
VIM-201ENST00000224237 MAMDC2Q7Z304 686 aaPredicted RBP16.43■□□□□ 0.22
VIM-201ENST00000224237 P2RY8Q86VZ1 359 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 IL22RA1Q8N6P7 574 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 FADS6Q8N9I5 356 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 SLC37A3Q8NCC5 494 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 PROKR2Q8NFJ6 384 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 OR2M3Q8NG83 312 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 OR52E2Q8NGJ4 325 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 MOSPD2Q8NHP6 518 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 SGCZQ96LD1 299 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 IP6K3Q96PC2 410 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 KATNB1Q9BVA0 655 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 RACGAP1Q9H0H5 632 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 ADAM18Q9Y3Q7 739 aa16.43■□□□□ 0.22
VIM-201ENST00000224237 PTPRZ1P23471 2315 aaPredicted RBP16.43■□□□□ 0.22
VIM-201ENST00000224237 FAM47E-STBD1D6RA91 191 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 PROB1E7EW31 1015 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 M0R082 166 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 CD14P08571 375 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 APEHP13798 732 aaKnown RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 RBMS1P29558 406 aaKnown RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 RPL18Q07020 188 aaKnown RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 ATP1A4Q13733 1029 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 SLC22A10Q63ZE4 541 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 NANOGP1Q8N7R0 232 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 WDSUB1Q8N9V3 476 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 LRRC75AQ8NAA5 344 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 OR4K17Q8NGC6 315 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 OR6S1Q8NH40 331 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 ADAMTS17Q8TE56 1095 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 PTP4A1Q93096 173 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 NKD1Q969G9 470 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 ANGPTL4Q9BY76 406 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 MED20Q9H944 212 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 GPN2Q9H9Y4 310 aaPredicted RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 CHCHD3Q9NX63 227 aaKnown RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 CLEC2DQ9UHP7 191 aa16.42■□□□□ 0.22
VIM-201ENST00000224237 EXOGQ9Y2C4 368 aaKnown RBP16.42■□□□□ 0.22
VIM-201ENST00000224237 EXOSC1Q9Y3B2 195 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms