RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 WDR33Q9C0J8 1336 aaKnown RBP23.71■■□□□ 1.39
CLN6-214ENST00000636314 PPEF1O14829 653 aaPredicted RBP23.71■■□□□ 1.39
CLN6-214ENST00000636314 HOXA10P31260 410 aaPredicted RBP23.71■■□□□ 1.39
CLN6-214ENST00000636314 SALL2Q9Y467 1007 aaPredicted RBP23.71■■□□□ 1.39
CLN6-214ENST00000636314 GOLGA2Q08379 1002 aa23.7■■□□□ 1.38
CLN6-214ENST00000636314 GRIPAP1Q4V328 841 aa23.7■■□□□ 1.38
CLN6-214ENST00000636314 CCDC30Q5VVM6 783 aa23.7■■□□□ 1.38
CLN6-214ENST00000636314 SLC51AQ86UW1 340 aa23.7■■□□□ 1.38
CLN6-214ENST00000636314 NLRP3Q96P20 1036 aa23.7■■□□□ 1.38
CLN6-214ENST00000636314 TRMT112Q9UI30 125 aaKnown RBP23.7■■□□□ 1.38
CLN6-214ENST00000636314 SH3TC1Q8TE82 1336 aa23.69■■□□□ 1.38
CLN6-214ENST00000636314 C3orf67Q6ZVT6 689 aa23.69■■□□□ 1.38
CLN6-214ENST00000636314 TSPYL6Q8N831 410 aa23.69■■□□□ 1.38
CLN6-214ENST00000636314 CRAMP1Q96RY5 1269 aa23.69■■□□□ 1.38
CLN6-214ENST00000636314 EPS15P42566 896 aa23.68■■□□□ 1.38
CLN6-214ENST00000636314 SCNN1DP51172 638 aa23.68■■□□□ 1.38
CLN6-214ENST00000636314 SLC10A5Q5PT55 438 aa23.68■■□□□ 1.38
CLN6-214ENST00000636314 PAXIP1Q6ZW49 1069 aaPredicted RBP23.68■■□□□ 1.38
CLN6-214ENST00000636314 NIM1KQ8IY84 436 aa23.68■■□□□ 1.38
CLN6-214ENST00000636314 PHAXQ9H814 394 aaKnown RBP23.68■■□□□ 1.38
CLN6-214ENST00000636314 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
CLN6-214ENST00000636314 HSPA8P11142 646 aaKnown RBP23.67■■□□□ 1.38
CLN6-214ENST00000636314 RIC3Q7Z5B4 369 aa23.67■■□□□ 1.38
CLN6-214ENST00000636314 TMX4Q9H1E5 349 aaPredicted RBP23.67■■□□□ 1.38
CLN6-214ENST00000636314 ATP5J2-PTCD1G3V325 749 aa23.66■■□□□ 1.38
CLN6-214ENST00000636314 PPIP5K2O43314 1243 aa23.66■■□□□ 1.38
CLN6-214ENST00000636314 MAP2K1Q02750 393 aaPredicted RBP23.66■■□□□ 1.38
CLN6-214ENST00000636314 FMR1Q06787 632 aaKnown RBP eCLIP23.66■■□□□ 1.38
CLN6-214ENST00000636314 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
CLN6-214ENST00000636314 ISCA1Q9BUE6 129 aa23.66■■□□□ 1.38
CLN6-214ENST00000636314 FANCIQ9NVI1 1328 aa23.65■■□□□ 1.38
CLN6-214ENST00000636314 HCLS1P14317 486 aaPredicted RBP23.65■■□□□ 1.38
CLN6-214ENST00000636314 GRM1Q13255 1194 aa23.65■■□□□ 1.38
CLN6-214ENST00000636314 TWISTNBQ3B726 338 aaPredicted RBP23.65■■□□□ 1.38
CLN6-214ENST00000636314 USP50Q70EL3 339 aaPredicted RBP23.65■■□□□ 1.38
CLN6-214ENST00000636314 ZNF428Q96B54 188 aa23.65■■□□□ 1.38
CLN6-214ENST00000636314 STK31Q9BXU1 1019 aa23.65■■□□□ 1.38
CLN6-214ENST00000636314 THSD7BQ9C0I4 1608 aa23.65■■□□□ 1.38
CLN6-214ENST00000636314 DDX58O95786 925 aaKnown RBP23.63■■□□□ 1.37
CLN6-214ENST00000636314 AOC3Q16853 763 aa23.63■■□□□ 1.37
CLN6-214ENST00000636314 TRAF5O00463 557 aa23.62■■□□□ 1.37
CLN6-214ENST00000636314 ECE1P42892 770 aa23.62■■□□□ 1.37
CLN6-214ENST00000636314 CAPNS2Q96L46 248 aa23.62■■□□□ 1.37
CLN6-214ENST00000636314 ABCC4O15439 1325 aa23.61■■□□□ 1.37
CLN6-214ENST00000636314 TRIM28Q13263 835 aaKnown RBP23.61■■□□□ 1.37
CLN6-214ENST00000636314 CYP4F22Q6NT55 531 aa23.61■■□□□ 1.37
CLN6-214ENST00000636314 MYD88Q99836 296 aa23.61■■□□□ 1.37
CLN6-214ENST00000636314 ATP6V0A2Q9Y487 856 aa23.61■■□□□ 1.37
CLN6-214ENST00000636314 TAF1P21675 1872 aa23.6■■□□□ 1.37
CLN6-214ENST00000636314 FAM89AQ96GI7 184 aa23.6■■□□□ 1.37
CLN6-214ENST00000636314 BEGAINQ9BUH8 593 aa23.6■■□□□ 1.37
CLN6-214ENST00000636314 ADARB2Q9NS39 739 aaKnown RBP23.6■■□□□ 1.37
CLN6-214ENST00000636314 CST9Q5W186 159 aa23.59■■□□□ 1.37
CLN6-214ENST00000636314 DDX46Q7L014 1031 aaKnown RBP23.59■■□□□ 1.37
CLN6-214ENST00000636314 SUPT20HQ8NEM7 779 aa23.59■■□□□ 1.37
CLN6-214ENST00000636314 GPRC5DQ9NZD1 345 aa23.59■■□□□ 1.37
CLN6-214ENST00000636314 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
CLN6-214ENST00000636314 RTL5Q5HYW3 569 aaPredicted RBP23.58■■□□□ 1.37
CLN6-214ENST00000636314 ABHD8Q96I13 439 aa23.58■■□□□ 1.37
CLN6-214ENST00000636314 GPR101Q96P66 508 aaPredicted RBP23.58■■□□□ 1.37
CLN6-214ENST00000636314 VPS33BQ9H267 617 aa23.58■■□□□ 1.37
CLN6-214ENST00000636314 CXCL9Q07325 125 aa23.57■■□□□ 1.36
CLN6-214ENST00000636314 DPP8Q6V1X1 898 aaPredicted RBP23.57■■□□□ 1.36
CLN6-214ENST00000636314 METTL22Q9BUU2 404 aaPredicted RBP23.57■■□□□ 1.36
CLN6-214ENST00000636314 MYH16Q9H6N6 1097 aa23.57■■□□□ 1.36
CLN6-214ENST00000636314 ZNRF3Q9ULT6 936 aa23.57■■□□□ 1.36
CLN6-214ENST00000636314 MAP3K2Q9Y2U5 619 aa23.57■■□□□ 1.36
CLN6-214ENST00000636314 TLL2Q9Y6L7 1015 aa23.57■■□□□ 1.36
CLN6-214ENST00000636314 GMPSP49915 693 aaPredicted RBP23.56■■□□□ 1.36
CLN6-214ENST00000636314 CCDC191Q8NCU4 936 aa23.56■■□□□ 1.36
CLN6-214ENST00000636314 IRS4O14654 1257 aaPredicted RBP23.55■■□□□ 1.36
CLN6-214ENST00000636314 BBOX1O75936 387 aa23.55■■□□□ 1.36
CLN6-214ENST00000636314 SLC4A2P04920 1241 aa23.55■■□□□ 1.36
CLN6-214ENST00000636314 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
CLN6-214ENST00000636314 GRAPQ13588 217 aa23.55■■□□□ 1.36
CLN6-214ENST00000636314 KSR2Q6VAB6 950 aa23.55■■□□□ 1.36
CLN6-214ENST00000636314 MPNDQ8N594 471 aa23.55■■□□□ 1.36
CLN6-214ENST00000636314 ZBTB38Q8NAP3 1195 aaPredicted RBP23.55■■□□□ 1.36
CLN6-214ENST00000636314 GRAPLQ8TC17 118 aaPredicted RBP23.55■■□□□ 1.36
CLN6-214ENST00000636314 CWC25Q9NXE8 425 aaPredicted RBP23.55■■□□□ 1.36
CLN6-214ENST00000636314 LRRC37AA6NMS7 1700 aa23.54■■□□□ 1.36
CLN6-214ENST00000636314 PI4KAP2A4QPH2 592 aa23.54■■□□□ 1.36
CLN6-214ENST00000636314 AOC2O75106 756 aa23.54■■□□□ 1.36
CLN6-214ENST00000636314 CIAPIN1Q6FI81 312 aa23.54■■□□□ 1.36
CLN6-214ENST00000636314 SP8Q8IXZ3 490 aa23.54■■□□□ 1.36
CLN6-214ENST00000636314 PI4KAP1Q8N8J0 262 aa23.54■■□□□ 1.36
CLN6-214ENST00000636314 BCL2L13Q9BXK5 485 aa23.54■■□□□ 1.36
CLN6-214ENST00000636314 RTFDC1Q9BY42 306 aaPredicted RBP23.54■■□□□ 1.36
CLN6-214ENST00000636314 SPINK5Q9NQ38 1064 aaPredicted RBP23.54■■□□□ 1.36
CLN6-214ENST00000636314 CELF2O95319 508 aaKnown RBP23.53■■□□□ 1.36
CLN6-214ENST00000636314 HSP90B1P14625 803 aaKnown RBP23.53■■□□□ 1.36
CLN6-214ENST00000636314 NEXNQ0ZGT2 675 aa23.53■■□□□ 1.36
CLN6-214ENST00000636314 SF3B3Q15393 1217 aaKnown RBP23.53■■□□□ 1.36
CLN6-214ENST00000636314 RAD17O75943 681 aa23.52■■□□□ 1.36
CLN6-214ENST00000636314 PCCAP05165 728 aaPredicted RBP23.52■■□□□ 1.36
CLN6-214ENST00000636314 G2E3Q7L622 706 aa23.52■■□□□ 1.36
CLN6-214ENST00000636314 GLIS2Q9BZE0 524 aaPredicted RBP23.52■■□□□ 1.36
CLN6-214ENST00000636314 TSKSQ9UJT2 592 aa23.52■■□□□ 1.36
CLN6-214ENST00000636314 VAMP4O75379 141 aa23.51■■□□□ 1.35
CLN6-214ENST00000636314 KIAA2012Q0VF49 1180 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms