RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 PCCAP05165 728 aaPredicted RBP23.42■■□□□ 1.34
CLN6-210ENST00000635747 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
CLN6-210ENST00000635747 LARGE2Q8N3Y3 721 aa23.42■■□□□ 1.34
CLN6-210ENST00000635747 PI4KAP1Q8N8J0 262 aa23.42■■□□□ 1.34
CLN6-210ENST00000635747 EIF6P56537 245 aaKnown RBP23.41■■□□□ 1.34
CLN6-210ENST00000635747 DPP8Q6V1X1 898 aaPredicted RBP23.41■■□□□ 1.34
CLN6-210ENST00000635747 RTFDC1Q9BY42 306 aaPredicted RBP23.41■■□□□ 1.34
CLN6-210ENST00000635747 VAMP4O75379 141 aa23.4■■□□□ 1.34
CLN6-210ENST00000635747 EXOSC9Q06265 439 aaKnown RBP23.4■■□□□ 1.34
CLN6-210ENST00000635747 MPNDQ8N594 471 aa23.4■■□□□ 1.34
CLN6-210ENST00000635747 GPC2Q8N158 579 aa23.39■■□□□ 1.33
CLN6-210ENST00000635747 ZNF541Q9H0D2 1346 aa23.38■■□□□ 1.33
CLN6-210ENST00000635747 PPIP5K2O43314 1243 aa23.38■■□□□ 1.33
CLN6-210ENST00000635747 PDE8AO60658 829 aa23.38■■□□□ 1.33
CLN6-210ENST00000635747 NIM1KQ8IY84 436 aa23.38■■□□□ 1.33
CLN6-210ENST00000635747 FLIIQ13045 1269 aa23.37■■□□□ 1.33
CLN6-210ENST00000635747 CCDC152Q4G0S7 254 aa23.37■■□□□ 1.33
CLN6-210ENST00000635747 LAMB2P55268 1798 aa23.37■■□□□ 1.33
CLN6-210ENST00000635747 FKBP5Q13451 457 aaPredicted RBP23.36■■□□□ 1.33
CLN6-210ENST00000635747 G2E3Q7L622 706 aa23.36■■□□□ 1.33
CLN6-210ENST00000635747 CDHR2Q9BYE9 1310 aa23.35■■□□□ 1.33
CLN6-210ENST00000635747 IGKV5-2P06315 115 aa23.35■■□□□ 1.33
CLN6-210ENST00000635747 RPS8P62241 208 aaKnown RBP23.35■■□□□ 1.33
CLN6-210ENST00000635747 CELF1Q92879 486 aaKnown RBP23.35■■□□□ 1.33
CLN6-210ENST00000635747 TAF1DQ9H5J8 278 aaPredicted RBP23.35■■□□□ 1.33
CLN6-210ENST00000635747 SPINK5Q9NQ38 1064 aaPredicted RBP23.35■■□□□ 1.33
CLN6-210ENST00000635747 HACL1Q9UJ83 578 aa23.35■■□□□ 1.33
CLN6-210ENST00000635747 DDX60Q8IY21 1712 aaKnown RBP23.35■■□□□ 1.33
CLN6-210ENST00000635747 AOC3Q16853 763 aa23.34■■□□□ 1.33
CLN6-210ENST00000635747 NEURL1BA8MQ27 555 aa23.33■■□□□ 1.33
CLN6-210ENST00000635747 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.33
CLN6-210ENST00000635747 CHADLQ6NUI6 762 aa23.33■■□□□ 1.33
CLN6-210ENST00000635747 SLC51AQ86UW1 340 aa23.33■■□□□ 1.33
CLN6-210ENST00000635747 DNAAF4Q8WXU2 420 aa23.33■■□□□ 1.33
CLN6-210ENST00000635747 ZNF521Q96K83 1311 aa23.33■■□□□ 1.32
CLN6-210ENST00000635747 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
CLN6-210ENST00000635747 PNMA8AQ86V59 439 aaPredicted RBP23.32■■□□□ 1.32
CLN6-210ENST00000635747 LDHDQ86WU2 507 aa23.32■■□□□ 1.32
CLN6-210ENST00000635747 ZNRF3Q9ULT6 936 aa23.32■■□□□ 1.32
CLN6-210ENST00000635747 GJA3Q9Y6H8 435 aa23.32■■□□□ 1.32
CLN6-210ENST00000635747 SCN4AP35499 1836 aa23.31■■□□□ 1.32
CLN6-210ENST00000635747 CWF19L2Q2TBE0 894 aaKnown RBP23.31■■□□□ 1.32
CLN6-210ENST00000635747 NSFL1CQ9UNZ2 370 aaKnown RBP23.31■■□□□ 1.32
CLN6-210ENST00000635747 LMOD1P29536 600 aaPredicted RBP23.3■■□□□ 1.32
CLN6-210ENST00000635747 EPHX2P34913 555 aa23.3■■□□□ 1.32
CLN6-210ENST00000635747 LINS1Q8NG48 757 aa23.3■■□□□ 1.32
CLN6-210ENST00000635747 JARID2Q92833 1246 aaPredicted RBP23.3■■□□□ 1.32
CLN6-210ENST00000635747 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
CLN6-210ENST00000635747 H7C1W4 665 aa23.29■■□□□ 1.32
CLN6-210ENST00000635747 CTSWP56202 376 aa23.29■■□□□ 1.32
CLN6-210ENST00000635747 GCKRQ14397 625 aa23.29■■□□□ 1.32
CLN6-210ENST00000635747 WASHC4Q2M389 1173 aa23.29■■□□□ 1.32
CLN6-210ENST00000635747 EYA3Q99504 573 aa23.29■■□□□ 1.32
CLN6-210ENST00000635747 SEC31BQ9NQW1 1179 aa23.29■■□□□ 1.32
CLN6-210ENST00000635747 COL4A5P29400 1685 aa23.28■■□□□ 1.32
CLN6-210ENST00000635747 E9PSI1 815 aa23.28■■□□□ 1.32
CLN6-210ENST00000635747 ANKRD18AQ8IVF6 992 aa23.28■■□□□ 1.32
CLN6-210ENST00000635747 DNAJC5GQ8N7S2 189 aa23.28■■□□□ 1.32
CLN6-210ENST00000635747 CDC5LQ99459 802 aaKnown RBP23.28■■□□□ 1.32
CLN6-210ENST00000635747 C6orf229H3BNL8 230 aa23.27■■□□□ 1.32
CLN6-210ENST00000635747 TNIP1Q15025 636 aa23.27■■□□□ 1.32
CLN6-210ENST00000635747 EAPPQ56P03 285 aaPredicted RBP23.27■■□□□ 1.32
CLN6-210ENST00000635747 PODXL2Q9NZ53 605 aa23.27■■□□□ 1.32
CLN6-210ENST00000635747 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
CLN6-210ENST00000635747 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
CLN6-210ENST00000635747 GPSM2P81274 684 aa23.26■■□□□ 1.31
CLN6-210ENST00000635747 CXCL9Q07325 125 aa23.26■■□□□ 1.31
CLN6-210ENST00000635747 CIAPIN1Q6FI81 312 aa23.26■■□□□ 1.31
CLN6-210ENST00000635747 UBE3BQ7Z3V4 1068 aa23.26■■□□□ 1.31
CLN6-210ENST00000635747 TTLL11Q8NHH1 800 aa23.26■■□□□ 1.31
CLN6-210ENST00000635747 CLEC11AQ9Y240 323 aa23.26■■□□□ 1.31
CLN6-210ENST00000635747 LRRC37AA6NMS7 1700 aa23.25■■□□□ 1.31
CLN6-210ENST00000635747 CCDC85AQ96PX6 553 aaPredicted RBP23.25■■□□□ 1.31
CLN6-210ENST00000635747 PLA2G12BQ9BX93 195 aa23.25■■□□□ 1.31
CLN6-210ENST00000635747 ANKIB1Q9P2G1 1089 aa23.25■■□□□ 1.31
CLN6-210ENST00000635747 POLLQ9UGP5 575 aa23.25■■□□□ 1.31
CLN6-210ENST00000635747 TAF1P21675 1872 aa23.25■■□□□ 1.31
CLN6-210ENST00000635747 SCNN1DP51172 638 aa23.24■■□□□ 1.31
CLN6-210ENST00000635747 TBC1D16Q8TBP0 767 aa23.24■■□□□ 1.31
CLN6-210ENST00000635747 RTL9Q8NET4 1388 aa23.24■■□□□ 1.31
CLN6-210ENST00000635747 USP50Q70EL3 339 aaPredicted RBP23.23■■□□□ 1.31
CLN6-210ENST00000635747 ZC3H12CQ9C0D7 883 aaKnown RBP23.23■■□□□ 1.31
CLN6-210ENST00000635747 GGA1Q9UJY5 639 aa23.23■■□□□ 1.31
CLN6-210ENST00000635747 KLRG1Q96E93 195 aa23.22■■□□□ 1.31
CLN6-210ENST00000635747 BSDC1Q9NW68 430 aaPredicted RBP23.22■■□□□ 1.31
CLN6-210ENST00000635747 RIMBP2O15034 1052 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 RAD17O75943 681 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 EPS15P42566 896 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 CASP7P55210 303 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 HTRA3P83110 453 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 SLFN5Q08AF3 891 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 BEND3Q5T5X7 828 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 GREM2Q9H772 168 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 GPRC5DQ9NZD1 345 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 DUOX1Q9NRD9 1551 aa23.21■■□□□ 1.31
CLN6-210ENST00000635747 XDHP47989 1333 aa23.2■■□□□ 1.3
CLN6-210ENST00000635747 F6X3S4 739 aa23.2■■□□□ 1.3
CLN6-210ENST00000635747 UFL1O94874 794 aa23.2■■□□□ 1.3
CLN6-210ENST00000635747 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
CLN6-210ENST00000635747 ADARB2Q9NS39 739 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms