RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 SLC51AQ86UW1 340 aa10.47□□□□□ -0.73
MECP2-220ENST00000631210 RTL9Q8NET4 1388 aa10.47□□□□□ -0.73
MECP2-220ENST00000631210 LRP5O75197 1615 aa10.47□□□□□ -0.73
MECP2-220ENST00000631210 SRGNP10124 158 aa10.46□□□□□ -0.73
MECP2-220ENST00000631210 POLD1P28340 1107 aa10.46□□□□□ -0.73
MECP2-220ENST00000631210 POLA2Q14181 598 aa10.46□□□□□ -0.73
MECP2-220ENST00000631210 LMBR1LQ6UX01 489 aa10.46□□□□□ -0.73
MECP2-220ENST00000631210 GREM2Q9H772 168 aa10.46□□□□□ -0.73
MECP2-220ENST00000631210 SEC31BQ9NQW1 1179 aa10.46□□□□□ -0.73
MECP2-220ENST00000631210 BRCA1P38398 1863 aaKnown RBP10.46□□□□□ -0.74
MECP2-220ENST00000631210 CHRNA5P30532 468 aa10.45□□□□□ -0.74
MECP2-220ENST00000631210 HOXA10P31260 410 aaPredicted RBP10.45□□□□□ -0.74
MECP2-220ENST00000631210 ST5P78524 1137 aa10.45□□□□□ -0.74
MECP2-220ENST00000631210 ATP8B2P98198 1209 aa10.45□□□□□ -0.74
MECP2-220ENST00000631210 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
MECP2-220ENST00000631210 PTPN12Q05209 780 aaKnown RBP10.44□□□□□ -0.74
MECP2-220ENST00000631210 SSH3Q8TE77 659 aa10.44□□□□□ -0.74
MECP2-220ENST00000631210 NLRP3Q96P20 1036 aa10.44□□□□□ -0.74
MECP2-220ENST00000631210 CCDC85AQ96PX6 553 aaPredicted RBP10.44□□□□□ -0.74
MECP2-220ENST00000631210 CD2APQ9Y5K6 639 aa10.44□□□□□ -0.74
MECP2-220ENST00000631210 SNED1Q8TER0 1413 aa10.43□□□□□ -0.74
MECP2-220ENST00000631210 SLX4Q8IY92 1834 aa10.43□□□□□ -0.74
MECP2-220ENST00000631210 DPEP1P16444 411 aa10.43□□□□□ -0.74
MECP2-220ENST00000631210 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
MECP2-220ENST00000631210 PDE6BP35913 854 aa10.43□□□□□ -0.74
MECP2-220ENST00000631210 AAMPQ13685 434 aa10.43□□□□□ -0.74
MECP2-220ENST00000631210 RPAP2Q8IXW5 612 aaPredicted RBP10.43□□□□□ -0.74
MECP2-220ENST00000631210 NLGN2Q8NFZ4 835 aa10.43□□□□□ -0.74
MECP2-220ENST00000631210 KLHDC4Q8TBB5 520 aa10.43□□□□□ -0.74
MECP2-220ENST00000631210 CELF1Q92879 486 aaKnown RBP10.43□□□□□ -0.74
MECP2-220ENST00000631210 ZNF594Q96JF6 807 aaPredicted RBP10.43□□□□□ -0.74
MECP2-220ENST00000631210 GOLGB1Q14789 3259 aaKnown RBP10.43□□□□□ -0.74
MECP2-220ENST00000631210 SPEF2Q9C093 1822 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 A0A1B0GUL6 1792 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 LRRC37AA6NMS7 1700 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 A0A0G2JLW4 131 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 IGHDP01880 384 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 ITGA6P23229 1130 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 TGFB2P61812 414 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 CCDC152Q4G0S7 254 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 C2CD5Q86YS7 1000 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 C7orf43Q8WVR3 580 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 CRAMP1Q96RY5 1269 aa10.42□□□□□ -0.74
MECP2-220ENST00000631210 PUS3Q9BZE2 481 aaKnown RBP10.42□□□□□ -0.74
MECP2-220ENST00000631210 FHDC1Q9C0D6 1143 aaPredicted RBP10.42□□□□□ -0.74
MECP2-220ENST00000631210 CHMP4BQ9H444 224 aaKnown RBP10.42□□□□□ -0.74
MECP2-220ENST00000631210 PA2G4Q9UQ80 394 aaKnown RBP10.42□□□□□ -0.74
MECP2-220ENST00000631210 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.42□□□□□ -0.74
MECP2-220ENST00000631210 CACNA1SQ13698 1873 aa10.41□□□□□ -0.74
MECP2-220ENST00000631210 SRGAP3O43295 1099 aa10.41□□□□□ -0.74
MECP2-220ENST00000631210 HSP90B1P14625 803 aaKnown RBP10.41□□□□□ -0.74
MECP2-220ENST00000631210 NPR1P16066 1061 aa10.41□□□□□ -0.74
MECP2-220ENST00000631210 STYK1Q6J9G0 422 aa10.41□□□□□ -0.74
MECP2-220ENST00000631210 ATG9AQ7Z3C6 839 aa10.41□□□□□ -0.74
MECP2-220ENST00000631210 MASTLQ96GX5 879 aa10.41□□□□□ -0.74
MECP2-220ENST00000631210 COPRSQ9NQ92 184 aa10.41□□□□□ -0.74
MECP2-220ENST00000631210 NOP58Q9Y2X3 529 aaKnown RBP10.41□□□□□ -0.74
MECP2-220ENST00000631210 LTBP1Q14766 1721 aa10.41□□□□□ -0.74
MECP2-220ENST00000631210 H0YIN7 160 aa10.4□□□□□ -0.74
MECP2-220ENST00000631210 NPHP1O15259 732 aa10.4□□□□□ -0.74
MECP2-220ENST00000631210 HDAC1Q13547 482 aaPredicted RBP10.4□□□□□ -0.74
MECP2-220ENST00000631210 GRAPQ13588 217 aa10.4□□□□□ -0.74
MECP2-220ENST00000631210 LRRC24Q50LG9 513 aa10.4□□□□□ -0.74
MECP2-220ENST00000631210 GRAPLQ8TC17 118 aaPredicted RBP10.4□□□□□ -0.74
MECP2-220ENST00000631210 SYT17Q9BSW7 474 aa10.4□□□□□ -0.74
MECP2-220ENST00000631210 PDZRN3Q9UPQ7 1066 aa10.4□□□□□ -0.74
MECP2-220ENST00000631210 HDAC5Q9UQL6 1122 aa10.4□□□□□ -0.74
MECP2-220ENST00000631210 RIPOR2Q9Y4F9 1068 aa10.4□□□□□ -0.74
MECP2-220ENST00000631210 RPS8P62241 208 aaKnown RBP10.39□□□□□ -0.75
MECP2-220ENST00000631210 IFIT5Q13325 482 aaKnown RBP10.39□□□□□ -0.75
MECP2-220ENST00000631210 ERICH6BQ5W0A0 696 aa10.39□□□□□ -0.75
MECP2-220ENST00000631210 OLFM4Q6UX06 510 aa10.39□□□□□ -0.75
MECP2-220ENST00000631210 DDX46Q7L014 1031 aaKnown RBP10.39□□□□□ -0.75
MECP2-220ENST00000631210 DCTPP1Q9H773 170 aa10.39□□□□□ -0.75
MECP2-220ENST00000631210 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
MECP2-220ENST00000631210 DUOX1Q9NRD9 1551 aa10.39□□□□□ -0.75
MECP2-220ENST00000631210 KDM2BQ8NHM5 1336 aa10.38□□□□□ -0.75
MECP2-220ENST00000631210 ANKRD18BA2A2Z9 1011 aa10.38□□□□□ -0.75
MECP2-220ENST00000631210 WTIPA6NIX2 430 aaPredicted RBP10.38□□□□□ -0.75
MECP2-220ENST00000631210 EYA2O00167 538 aa10.38□□□□□ -0.75
MECP2-220ENST00000631210 SASH1O94885 1247 aa10.38□□□□□ -0.75
MECP2-220ENST00000631210 CCDC57Q2TAC2 916 aa10.38□□□□□ -0.75
MECP2-220ENST00000631210 PRPF40BQ6NWY9 871 aaKnown RBP10.38□□□□□ -0.75
MECP2-220ENST00000631210 VGLL2Q8N8G2 317 aa10.38□□□□□ -0.75
MECP2-220ENST00000631210 RPGRQ92834 1020 aaKnown RBP10.38□□□□□ -0.75
MECP2-220ENST00000631210 RBM17Q96I25 401 aaKnown RBP10.38□□□□□ -0.75
MECP2-220ENST00000631210 BSDC1Q9NW68 430 aaPredicted RBP10.38□□□□□ -0.75
MECP2-220ENST00000631210 MINPP1Q9UNW1 487 aa10.38□□□□□ -0.75
MECP2-220ENST00000631210 IRS2Q9Y4H2 1338 aa10.37□□□□□ -0.75
MECP2-220ENST00000631210 BBOX1O75936 387 aa10.37□□□□□ -0.75
MECP2-220ENST00000631210 CIAO1O76071 339 aa10.37□□□□□ -0.75
MECP2-220ENST00000631210 NEFLP07196 543 aa10.37□□□□□ -0.75
MECP2-220ENST00000631210 ALDH1B1P30837 517 aa10.37□□□□□ -0.75
MECP2-220ENST00000631210 SMC5Q8IY18 1101 aa10.37□□□□□ -0.75
MECP2-220ENST00000631210 ZNF622Q969S3 477 aaKnown RBP eCLIP10.37□□□□□ -0.756e-14■□□□□ 8.7
MECP2-220ENST00000631210 CDC5LQ99459 802 aaKnown RBP10.37□□□□□ -0.75
MECP2-220ENST00000631210 PPP1R1BQ9UD71 204 aaPredicted RBP10.37□□□□□ -0.75
MECP2-220ENST00000631210 EXOC6BQ9Y2D4 811 aa10.37□□□□□ -0.75
MECP2-220ENST00000631210 ARFGEF1Q9Y6D6 1849 aa10.37□□□□□ -0.75
MECP2-220ENST00000631210 SNAP23O00161 211 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms