RNA–Protein interactions for RNA: ENST00000630804.2

SPTAN1-222, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-222	ENST00000630804	DNAJC21	Q5F1R6	531 aa	Known RBP	9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CCDC170	Q8IYT3	715 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	PPFIBP2	Q8ND30	876 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ZSWIM4	Q9H7M6	989 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	OPA1	O60313	960 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	BAG4	O95429	457 aa	Known RBP	9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	SETDB1	Q15047	1291 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	GEN1	Q17RS7	908 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	MPRIP	Q6WCQ1	1025 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	BACH2	Q9BYV9	841 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	NAPB	Q9H115	298 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	PHF8	Q9UPP1	1060 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CALML4	Q96GE6	196 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	NSD3	Q9BZ95	1437 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ALDH3A1	P30838	453 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	GBP6	Q6ZN66	633 aa		9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ZNF444	Q8N0Y2	327 aa	Predicted RBP	9.38	□□□□□ -0.91
SPTAN1-222	ENST00000630804	RNF41	Q9H4P4	317 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	MCM6	Q14566	821 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CTAGE6	Q86UF2	777 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CCDC89	Q8N998	374 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CDC5L	Q99459	802 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	MPHOSPH6	Q99547	160 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ARAP1	Q96P48	1450 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	LACTB	P83111	547 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CCDC12	Q8WUD4	166 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	9.37	□□□□□ -0.91	4e-6	■■■□□ 17.1
SPTAN1-222	ENST00000630804	ABCC11	Q96J66	1382 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	MCM4	P33991	863 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	TMPO	P42166	694 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	TMC6	Q7Z403	805 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CPLX4	Q7Z7G2	160 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	VPS52	Q8N1B4	723 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CCDC114	Q96M63	670 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804		A0A087WZG4	1122 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	EBAG9	O00559	213 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CIB2	O75838	187 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	KRT222	Q8N1A0	295 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	C8orf76	Q96K31	380 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	SELENOS	Q9BQE4	189 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	SCAND2P	Q9GZW5	306 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	MINDY4B	A8MYZ0	360 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CRCP	O75575	148 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ATP11A	P98196	1134 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CTCFL	Q8NI51	663 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	DACT3	Q96B18	629 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	PAXBP1	Q9Y5B6	917 aa		9.37	□□□□□ -0.91
SPTAN1-222	ENST00000630804	DUSP27	Q5VZP5	1158 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	BICD1	Q96G01	975 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	RABGAP1	Q9Y3P9	1069 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	LDHC	P07864	332 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	HMGB1	P09429	215 aa	Known RBP	9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CCDC129	Q6ZRS4	1044 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CACNA2D3	Q8IZS8	1091 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	KRT13	P13646	458 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	TRMT1L	Q7Z2T5	733 aa	Known RBP	9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	TCP11L1	Q9NUJ3	509 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	SAMM50	Q9Y512	469 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	FOXO3	O43524	673 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	PRPH	P41219	470 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	SEC62	Q99442	399 aa	Known RBP	9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	AMOTL2	Q9Y2J4	779 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	TOM1	O60784	492 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	GAS8	O95995	478 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	TRMT112	Q9UI30	125 aa	Known RBP	9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	GNG11	P61952	73 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	PLEKHH1	Q9ULM0	1364 aa		9.36	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ATP2A2	P16615	1042 aa	Known RBP	9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ERCC6L	Q2NKX8	1250 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	DDX27	Q96GQ7	796 aa	Known RBP	9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	RAB3IP	Q96QF0	476 aa	Predicted RBP	9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	MMRN2	Q9H8L6	949 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	TTC21B	Q7Z4L5	1316 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	GOLIM4	O00461	696 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	BCAR3	O75815	825 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	BAG3	O95817	575 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804		A0A1B0GUA9	196 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	RFX1	P22670	979 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	PCK1	P35558	622 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	DBF4	Q9UBU7	674 aa	Predicted RBP	9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	MSH6	P52701	1360 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	PPP1R42	Q7Z4L9	355 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CDCA7L	Q96GN5	454 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	HAUS7	Q99871	368 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	FAM169A	Q9Y6X4	670 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ARHGEF11	O15085	1522 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CCDC171	Q6TFL3	1326 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CCDC194	A0A1B0GVG4	234 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CAPN2	P17655	700 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	MAP7	Q14244	749 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	NCAPG	Q9BPX3	1015 aa		9.35	□□□□□ -0.91
SPTAN1-222	ENST00000630804	RNF168	Q8IYW5	571 aa	Predicted RBP	9.34	□□□□□ -0.91
SPTAN1-222	ENST00000630804	PPP1R12C	Q9BZL4	782 aa		9.34	□□□□□ -0.91
SPTAN1-222	ENST00000630804	ZEB2	O60315	1214 aa		9.34	□□□□□ -0.91
SPTAN1-222	ENST00000630804	FERMT3	Q86UX7	667 aa		9.34	□□□□□ -0.91
SPTAN1-222	ENST00000630804	JAKMIP2	Q96AA8	810 aa		9.34	□□□□□ -0.91
SPTAN1-222	ENST00000630804	SPAG5	Q96R06	1193 aa		9.34	□□□□□ -0.91
SPTAN1-222	ENST00000630804	RNF216	Q9NWF9	866 aa	Predicted RBP	9.34	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms