RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 NSFL1CQ9UNZ2 370 aaKnown RBP13.65□□□□□ -0.22
ATRX-214ENST00000624166 TUBBP07437 444 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 BABAM1Q9NWV8 329 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 POLR3DP05423 398 aaPredicted RBP13.64□□□□□ -0.23
ATRX-214ENST00000624166 IFIT1P09914 478 aaKnown RBP13.64□□□□□ -0.23
ATRX-214ENST00000624166 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 TTC21AQ8NDW8 1320 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 CALRP27797 417 aaKnown RBP13.64□□□□□ -0.23
ATRX-214ENST00000624166 PDE4CQ08493 712 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 CCDC181Q5TID7 509 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 FBXO31Q5XUX0 539 aaPredicted RBP13.64□□□□□ -0.23
ATRX-214ENST00000624166 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
ATRX-214ENST00000624166 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 MCMDC2Q4G0Z9 681 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 CEP112Q8N8E3 955 aa13.64□□□□□ -0.23
ATRX-214ENST00000624166 LLPHQ9BRT6 129 aaKnown RBP13.64□□□□□ -0.23
ATRX-214ENST00000624166 ZNF853P0CG23 659 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 LMOD1P29536 600 aaPredicted RBP13.63□□□□□ -0.23
ATRX-214ENST00000624166 KANK3Q6NY19 840 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 FAM173BQ6P4H8 233 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 MRFAP1L1Q96HT8 127 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 NACAP1Q9BZK3 213 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 RASSF4Q9H2L5 321 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 SPTLC2O15270 562 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 LUC7LQ9NQ29 371 aaKnown RBP13.63□□□□□ -0.23
ATRX-214ENST00000624166 GOLGA6L10A6NI86 522 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 CCDC57Q2TAC2 916 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 CCDC191Q8NCU4 936 aa13.63□□□□□ -0.23
ATRX-214ENST00000624166 LRMPQ12912 555 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 KIAA1328Q86T90 577 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 CHPF2Q9P2E5 772 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 ELP1O95163 1332 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 SLC27A2O14975 620 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 TATP17735 454 aaPredicted RBP13.62□□□□□ -0.23
ATRX-214ENST00000624166 CDC37L1Q7L3B6 337 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 KCNH5Q8NCM2 988 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 ANKRD24Q8TF21 1146 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 UNC13BO14795 1591 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 RRP12Q5JTH9 1297 aaKnown RBP13.62□□□□□ -0.23
ATRX-214ENST00000624166 TDRD7Q8NHU6 1098 aaKnown RBP13.62□□□□□ -0.23
ATRX-214ENST00000624166 ZNF215Q9UL58 517 aaPredicted RBP13.62□□□□□ -0.23
ATRX-214ENST00000624166 PREX2Q70Z35 1606 aa13.62□□□□□ -0.23
ATRX-214ENST00000624166 ZNF213O14771 459 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 LIG1P18858 919 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 EVCP57679 992 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 KSR2Q6VAB6 950 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 MYD88Q99836 296 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 SPTLC3Q9NUV7 552 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.61□□□□□ -0.23
ATRX-214ENST00000624166 FLT4P35916 1363 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 GRM8O00222 908 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 DHX32Q7L7V1 743 aaKnown RBP13.61□□□□□ -0.23
ATRX-214ENST00000624166 CEP89Q96ST8 783 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 CAPN2P17655 700 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 MCM6Q14566 821 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 ISM2Q6H9L7 571 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 BRAPQ7Z569 592 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 TTC6Q86TZ1 520 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 SSH3Q8TE77 659 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 CCDC175P0C221 793 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 CDC25BP30305 580 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 TMX1Q9H3N1 280 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 ZDHHC9Q9Y397 364 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
ATRX-214ENST00000624166 CCDC196A0A1B0GTZ2 297 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 CTAGE15A4D2H0 777 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 CTAGE8P0CG41 777 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 CTAGE6Q86UF2 777 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 LRRC8AQ8IWT6 810 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 CTAGE4Q8IX94 777 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 LINS1Q8NG48 757 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 ZSWIM4Q9H7M6 989 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 YEATS4O95619 227 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 ME3Q16798 604 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 KLHL10Q6JEL2 608 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 MYO6Q9UM54 1294 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
ATRX-214ENST00000624166 MRVI1Q9Y6F6 885 aa13.6□□□□□ -0.23
ATRX-214ENST00000624166 GOLIM4O00461 696 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 FOXO3O43524 673 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 MYL5Q02045 173 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 NAA16Q6N069 864 aaPredicted RBP13.59□□□□□ -0.23
ATRX-214ENST00000624166 AMOTL1Q8IY63 956 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 NCOA7Q8NI08 942 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 CPLX3Q8WVH0 158 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 REREQ9P2R6 1566 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
ATRX-214ENST00000624166 SLC26A8Q96RN1 970 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 EIF5P55010 431 aaKnown RBP13.59□□□□□ -0.23
ATRX-214ENST00000624166 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
ATRX-214ENST00000624166 PA2G4Q9UQ80 394 aaKnown RBP13.59□□□□□ -0.23
ATRX-214ENST00000624166 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■□□ 17.8
ATRX-214ENST00000624166 MYO5CQ9NQX4 1742 aa13.59□□□□□ -0.23
ATRX-214ENST00000624166 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms