RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ZNF622Q969S3 477 aaKnown RBP eCLIP24.89■■□□□ 1.58
PDLIM2-221ENST00000622702 TNRC6CQ9HCJ0 1690 aaKnown RBP24.89■■□□□ 1.58
PDLIM2-221ENST00000622702 GRIN3BO60391 1043 aa24.89■■□□□ 1.57
PDLIM2-221ENST00000622702 HSP90B1P14625 803 aaKnown RBP24.89■■□□□ 1.57
PDLIM2-221ENST00000622702 PLA2G12BQ9BX93 195 aa24.89■■□□□ 1.57
PDLIM2-221ENST00000622702 KLRG2A4D1S0 409 aaPredicted RBP24.88■■□□□ 1.57
PDLIM2-221ENST00000622702 IRS4O14654 1257 aaPredicted RBP24.88■■□□□ 1.57
PDLIM2-221ENST00000622702 GNAI2P04899 355 aa24.88■■□□□ 1.57
PDLIM2-221ENST00000622702 SRGNP10124 158 aa24.88■■□□□ 1.57
PDLIM2-221ENST00000622702 RIC1Q4ADV7 1423 aa24.87■■□□□ 1.57
PDLIM2-221ENST00000622702 KAZALD1Q96I82 304 aa24.87■■□□□ 1.57
PDLIM2-221ENST00000622702 SUCLG2Q96I99 432 aa24.87■■□□□ 1.57
PDLIM2-221ENST00000622702 TTLL6Q8N841 843 aa24.86■■□□□ 1.57
PDLIM2-221ENST00000622702 MASTLQ96GX5 879 aa24.86■■□□□ 1.57
PDLIM2-221ENST00000622702 LRRFIP2Q9Y608 721 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-221ENST00000622702 STYK1Q6J9G0 422 aa24.85■■□□□ 1.57
PDLIM2-221ENST00000622702 LAMB2P55268 1798 aa24.85■■□□□ 1.57
PDLIM2-221ENST00000622702 ARFGEF1Q9Y6D6 1849 aa24.84■■□□□ 1.57
PDLIM2-221ENST00000622702 PDE8AO60658 829 aa24.84■■□□□ 1.57
PDLIM2-221ENST00000622702 HCLS1P14317 486 aaPredicted RBP24.84■■□□□ 1.57
PDLIM2-221ENST00000622702 NPR1P16066 1061 aa24.84■■□□□ 1.57
PDLIM2-221ENST00000622702 NLRP3Q96P20 1036 aa24.84■■□□□ 1.57
PDLIM2-221ENST00000622702 DDX60Q8IY21 1712 aaKnown RBP24.83■■□□□ 1.57
PDLIM2-221ENST00000622702 CACNA1SQ13698 1873 aa24.83■■□□□ 1.57
PDLIM2-221ENST00000622702 FOXO4P98177 505 aa24.83■■□□□ 1.56
PDLIM2-221ENST00000622702 RABL6Q3YEC7 729 aaPredicted RBP24.83■■□□□ 1.56
PDLIM2-221ENST00000622702 CRY2Q49AN0 593 aa24.83■■□□□ 1.56
PDLIM2-221ENST00000622702 EPHA10Q5JZY3 1008 aa24.83■■□□□ 1.56
PDLIM2-221ENST00000622702 C3orf67Q6ZVT6 689 aa24.83■■□□□ 1.56
PDLIM2-221ENST00000622702 CNKSR1Q969H4 720 aa24.83■■□□□ 1.56
PDLIM2-221ENST00000622702 C1orf115Q9H7X2 142 aa24.83■■□□□ 1.56
PDLIM2-221ENST00000622702 BICC1Q9H694 974 aaKnown RBP24.82■■□□□ 1.56
PDLIM2-221ENST00000622702 CTSWP56202 376 aa24.81■■□□□ 1.56
PDLIM2-221ENST00000622702 ANKRD44Q8N8A2 993 aa24.81■■□□□ 1.56
PDLIM2-221ENST00000622702 RPGRQ92834 1020 aaKnown RBP24.81■■□□□ 1.56
PDLIM2-221ENST00000622702 CSF1RP07333 972 aa24.8■■□□□ 1.56
PDLIM2-221ENST00000622702 MTX1Q13505 466 aa24.8■■□□□ 1.56
PDLIM2-221ENST00000622702 ERICH6BQ5W0A0 696 aa24.8■■□□□ 1.56
PDLIM2-221ENST00000622702 SF3B3Q15393 1217 aaKnown RBP24.79■■□□□ 1.56
PDLIM2-221ENST00000622702 PRPF40BQ6NWY9 871 aaKnown RBP24.79■■□□□ 1.56
PDLIM2-221ENST00000622702 ARHGAP27Q6ZUM4 889 aa24.79■■□□□ 1.56
PDLIM2-221ENST00000622702 MYH3P11055 1940 aa24.79■■□□□ 1.56
PDLIM2-221ENST00000622702 SLX4Q8IY92 1834 aa24.79■■□□□ 1.56
PDLIM2-221ENST00000622702 ALDH1B1P30837 517 aa24.78■■□□□ 1.56
PDLIM2-221ENST00000622702 CEP85Q6P2H3 762 aa24.78■■□□□ 1.56
PDLIM2-221ENST00000622702 LMBR1LQ6UX01 489 aa24.78■■□□□ 1.56
PDLIM2-221ENST00000622702 RPAP2Q8IXW5 612 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-221ENST00000622702 TTLL11Q8NHH1 800 aa24.78■■□□□ 1.56
PDLIM2-221ENST00000622702 ZNF219Q9P2Y4 722 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-221ENST00000622702 CHD4Q14839 1912 aa24.78■■□□□ 1.56
PDLIM2-221ENST00000622702 HOXA10P31260 410 aaPredicted RBP24.77■■□□□ 1.56
PDLIM2-221ENST00000622702 RBM17Q96I25 401 aaKnown RBP24.77■■□□□ 1.56
PDLIM2-221ENST00000622702 PCDHB15Q9Y5E8 787 aa24.77■■□□□ 1.56
PDLIM2-221ENST00000622702 RTL9Q8NET4 1388 aa24.76■■□□□ 1.55
PDLIM2-221ENST00000622702 C21orf2O43822 256 aa24.76■■□□□ 1.55
PDLIM2-221ENST00000622702 ATP8B2P98198 1209 aa24.76■■□□□ 1.55
PDLIM2-221ENST00000622702 CCDC152Q4G0S7 254 aa24.76■■□□□ 1.55
PDLIM2-221ENST00000622702 CRAMP1Q96RY5 1269 aa24.74■■□□□ 1.55
PDLIM2-221ENST00000622702 SIRT2Q8IXJ6 389 aa24.73■■□□□ 1.55
PDLIM2-221ENST00000622702 GREM2Q9H772 168 aa24.73■■□□□ 1.55
PDLIM2-221ENST00000622702 PNMA6EA0A0J9YXQ4 647 aa24.72■■□□□ 1.55
PDLIM2-221ENST00000622702 SRGAP3O43295 1099 aa24.72■■□□□ 1.55
PDLIM2-221ENST00000622702 FAM161AQ3B820 660 aa24.72■■□□□ 1.55
PDLIM2-221ENST00000622702 SSH3Q8TE77 659 aa24.72■■□□□ 1.55
PDLIM2-221ENST00000622702 POLA2Q14181 598 aa24.71■■□□□ 1.55
PDLIM2-221ENST00000622702 DDX46Q7L014 1031 aaKnown RBP24.71■■□□□ 1.55
PDLIM2-221ENST00000622702 C7orf43Q8WVR3 580 aa24.71■■□□□ 1.55
PDLIM2-221ENST00000622702 CCDC85AQ96PX6 553 aaPredicted RBP24.71■■□□□ 1.55
PDLIM2-221ENST00000622702 CHMP3Q9Y3E7 222 aa24.71■■□□□ 1.55
PDLIM2-221ENST00000622702 HMMRO75330 724 aa24.7■■□□□ 1.55
PDLIM2-221ENST00000622702 ITGA6P23229 1130 aa24.7■■□□□ 1.54
PDLIM2-221ENST00000622702 RFX5P48382 616 aaPredicted RBP24.7■■□□□ 1.54
PDLIM2-221ENST00000622702 IFIT5Q13325 482 aaKnown RBP24.7■■□□□ 1.54
PDLIM2-221ENST00000622702 CCDC57Q2TAC2 916 aa24.7■■□□□ 1.54
PDLIM2-221ENST00000622702 TAF1P21675 1872 aa24.69■■□□□ 1.54
PDLIM2-221ENST00000622702 YY1P25490 414 aa24.69■■□□□ 1.54
PDLIM2-221ENST00000622702 SOGA3Q5TF21 947 aa24.69■■□□□ 1.54
PDLIM2-221ENST00000622702 OLFM4Q6UX06 510 aa24.69■■□□□ 1.54
PDLIM2-221ENST00000622702 ANKRD18BA2A2Z9 1011 aa24.68■■□□□ 1.54
PDLIM2-221ENST00000622702 PPEF1O14829 653 aaPredicted RBP24.68■■□□□ 1.54
PDLIM2-221ENST00000622702 HDAC1Q13547 482 aaPredicted RBP24.68■■□□□ 1.54
PDLIM2-221ENST00000622702 RASSF7Q02833 373 aa24.67■■□□□ 1.54
PDLIM2-221ENST00000622702 SEC31BQ9NQW1 1179 aa24.67■■□□□ 1.54
PDLIM2-221ENST00000622702 FER1L6Q2WGJ9 1857 aa24.67■■□□□ 1.54
PDLIM2-221ENST00000622702 NFKBIEO00221 500 aa24.66■■□□□ 1.54
PDLIM2-221ENST00000622702 PTPN12Q05209 780 aaKnown RBP24.66■■□□□ 1.54
PDLIM2-221ENST00000622702 GRAPQ13588 217 aa24.66■■□□□ 1.54
PDLIM2-221ENST00000622702 CCDC93Q567U6 631 aa24.66■■□□□ 1.54
PDLIM2-221ENST00000622702 GRAPLQ8TC17 118 aaPredicted RBP24.66■■□□□ 1.54
PDLIM2-221ENST00000622702 CDC5LQ99459 802 aaKnown RBP24.66■■□□□ 1.54
PDLIM2-221ENST00000622702 COPRSQ9NQ92 184 aa24.66■■□□□ 1.54
PDLIM2-221ENST00000622702 BBOX1O75936 387 aa24.65■■□□□ 1.54
PDLIM2-221ENST00000622702 SBF1O95248 1867 aa24.64■■□□□ 1.54
PDLIM2-221ENST00000622702 SLC51AQ86UW1 340 aa24.64■■□□□ 1.53
PDLIM2-221ENST00000622702 CELF1Q92879 486 aaKnown RBP24.64■■□□□ 1.53
PDLIM2-221ENST00000622702 RWDD1Q9H446 243 aaPredicted RBP24.64■■□□□ 1.53
PDLIM2-221ENST00000622702 PPP4R2Q9NY27 417 aa24.64■■□□□ 1.53
PDLIM2-221ENST00000622702 TAF7LQ5H9L4 462 aa24.63■■□□□ 1.53
PDLIM2-221ENST00000622702 CC2D2BQ6DHV5 1058 aa24.63■■□□□ 1.53
PDLIM2-221ENST00000622702 RTKN2Q8IZC4 609 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms