RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SMC1BQ8NDV3 1235 aa23.07■■□□□ 1.28
SCAMP4-213ENST00000621748 TMX4Q9H1E5 349 aaPredicted RBP23.07■■□□□ 1.28
SCAMP4-213ENST00000621748 APLP1P51693 650 aa23.06■■□□□ 1.28
SCAMP4-213ENST00000621748 JDP2Q8WYK2 163 aa23.06■■□□□ 1.28
SCAMP4-213ENST00000621748 JARID2Q92833 1246 aaPredicted RBP23.06■■□□□ 1.28
SCAMP4-213ENST00000621748 CWC25Q9NXE8 425 aaPredicted RBP23.06■■□□□ 1.28
SCAMP4-213ENST00000621748 LARGE2Q8N3Y3 721 aa23.05■■□□□ 1.28
SCAMP4-213ENST00000621748 CELF1Q92879 486 aaKnown RBP23.05■■□□□ 1.28
SCAMP4-213ENST00000621748 L3MBTL3Q96JM7 780 aaPredicted RBP23.05■■□□□ 1.28
SCAMP4-213ENST00000621748 CACNA1FO60840 1977 aa23.05■■□□□ 1.28
SCAMP4-213ENST00000621748 COL4A1P02462 1669 aa23.04■■□□□ 1.28
SCAMP4-213ENST00000621748 PCCAP05165 728 aaPredicted RBP23.04■■□□□ 1.28
SCAMP4-213ENST00000621748 IGKV5-2P06315 115 aa23.04■■□□□ 1.28
SCAMP4-213ENST00000621748 RTFDC1Q9BY42 306 aaPredicted RBP23.04■■□□□ 1.28
SCAMP4-213ENST00000621748 DPP8Q6V1X1 898 aaPredicted RBP23.03■■□□□ 1.28
SCAMP4-213ENST00000621748 MPNDQ8N594 471 aa23.03■■□□□ 1.28
SCAMP4-213ENST00000621748 SCN4AP35499 1836 aa23.03■■□□□ 1.28
SCAMP4-213ENST00000621748 PPIP5K2O43314 1243 aa23.02■■□□□ 1.28
SCAMP4-213ENST00000621748 POTEIP0CG38 1075 aa23.02■■□□□ 1.28
SCAMP4-213ENST00000621748 POTEJP0CG39 1038 aa23.02■■□□□ 1.28
SCAMP4-213ENST00000621748 FLIIQ13045 1269 aa23.02■■□□□ 1.28
SCAMP4-213ENST00000621748 AOC3Q16853 763 aa23.02■■□□□ 1.28
SCAMP4-213ENST00000621748 TMC4Q7Z404 712 aa23.01■■□□□ 1.27
SCAMP4-213ENST00000621748 GPC2Q8N158 579 aa23.01■■□□□ 1.27
SCAMP4-213ENST00000621748 VPS33BQ9H267 617 aa23.01■■□□□ 1.27
SCAMP4-213ENST00000621748 TAF1DQ9H5J8 278 aaPredicted RBP23.01■■□□□ 1.27
SCAMP4-213ENST00000621748 MYH16Q9H6N6 1097 aa23.01■■□□□ 1.27
SCAMP4-213ENST00000621748 ZNF521Q96K83 1311 aa23.01■■□□□ 1.27
SCAMP4-213ENST00000621748 IQCA1LA6NCM1 817 aa23■■□□□ 1.27
SCAMP4-213ENST00000621748 PDE8AO60658 829 aa23■■□□□ 1.27
SCAMP4-213ENST00000621748 EIF6P56537 245 aaKnown RBP23■■□□□ 1.27
SCAMP4-213ENST00000621748 HTRA3P83110 453 aa23■■□□□ 1.27
SCAMP4-213ENST00000621748 CWF19L2Q2TBE0 894 aaKnown RBP23■■□□□ 1.27
SCAMP4-213ENST00000621748 NIM1KQ8IY84 436 aa23■■□□□ 1.27
SCAMP4-213ENST00000621748 SUPT20HQ8NEM7 779 aa23■■□□□ 1.27
SCAMP4-213ENST00000621748 LRRC37AA6NMS7 1700 aa22.99■■□□□ 1.27
SCAMP4-213ENST00000621748 NEURL1BA8MQ27 555 aa22.99■■□□□ 1.27
SCAMP4-213ENST00000621748 HSP90B1P14625 803 aaKnown RBP22.99■■□□□ 1.27
SCAMP4-213ENST00000621748 NEXNQ0ZGT2 675 aa22.99■■□□□ 1.27
SCAMP4-213ENST00000621748 SEC31BQ9NQW1 1179 aa22.99■■□□□ 1.27
SCAMP4-213ENST00000621748 RPS8P62241 208 aaKnown RBP22.98■■□□□ 1.27
SCAMP4-213ENST00000621748 DNAJC5GQ8N7S2 189 aa22.98■■□□□ 1.27
SCAMP4-213ENST00000621748 HACL1Q9UJ83 578 aa22.98■■□□□ 1.27
SCAMP4-213ENST00000621748 GJA3Q9Y6H8 435 aa22.98■■□□□ 1.27
SCAMP4-213ENST00000621748 DUOX1Q9NRD9 1551 aa22.97■■□□□ 1.27
SCAMP4-213ENST00000621748 FKBP5Q13451 457 aaPredicted RBP22.97■■□□□ 1.27
SCAMP4-213ENST00000621748 CHADLQ6NUI6 762 aa22.97■■□□□ 1.27
SCAMP4-213ENST00000621748 CCDC85AQ96PX6 553 aaPredicted RBP22.97■■□□□ 1.27
SCAMP4-213ENST00000621748 CDHR2Q9BYE9 1310 aa22.97■■□□□ 1.27
SCAMP4-213ENST00000621748 KIAA2012Q0VF49 1180 aa22.96■■□□□ 1.27
SCAMP4-213ENST00000621748 CCDC152Q4G0S7 254 aa22.96■■□□□ 1.27
SCAMP4-213ENST00000621748 ZNRF3Q9ULT6 936 aa22.96■■□□□ 1.27
SCAMP4-213ENST00000621748 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
SCAMP4-213ENST00000621748 CCER2I3L3R5 266 aa22.95■■□□□ 1.26
SCAMP4-213ENST00000621748 EPHX2P34913 555 aa22.95■■□□□ 1.26
SCAMP4-213ENST00000621748 GPSM2P81274 684 aa22.95■■□□□ 1.26
SCAMP4-213ENST00000621748 MIER1Q8N108 512 aa22.95■■□□□ 1.26
SCAMP4-213ENST00000621748 DNAAF4Q8WXU2 420 aa22.95■■□□□ 1.26
SCAMP4-213ENST00000621748 H7C1W4 665 aa22.94■■□□□ 1.26
SCAMP4-213ENST00000621748 EAPPQ56P03 285 aaPredicted RBP22.94■■□□□ 1.26
SCAMP4-213ENST00000621748 MYH3P11055 1940 aa22.93■■□□□ 1.26
SCAMP4-213ENST00000621748 SCNN1DP51172 638 aa22.93■■□□□ 1.26
SCAMP4-213ENST00000621748 CXCL9Q07325 125 aa22.93■■□□□ 1.26
SCAMP4-213ENST00000621748 GCKRQ14397 625 aa22.93■■□□□ 1.26
SCAMP4-213ENST00000621748 UBE3BQ7Z3V4 1068 aa22.93■■□□□ 1.26
SCAMP4-213ENST00000621748 LDHDQ86WU2 507 aa22.93■■□□□ 1.26
SCAMP4-213ENST00000621748 POLLQ9UGP5 575 aa22.93■■□□□ 1.26
SCAMP4-213ENST00000621748 LTBP1Q14766 1721 aa22.93■■□□□ 1.26
SCAMP4-213ENST00000621748 CTSWP56202 376 aa22.92■■□□□ 1.26
SCAMP4-213ENST00000621748 TTLL11Q8NHH1 800 aa22.92■■□□□ 1.26
SCAMP4-213ENST00000621748 F6X3S4 739 aa22.91■■□□□ 1.26
SCAMP4-213ENST00000621748 C6orf229H3BNL8 230 aa22.91■■□□□ 1.26
SCAMP4-213ENST00000621748 EPS15P42566 896 aa22.91■■□□□ 1.26
SCAMP4-213ENST00000621748 WASHC4Q2M389 1173 aa22.91■■□□□ 1.26
SCAMP4-213ENST00000621748 LINS1Q8NG48 757 aa22.91■■□□□ 1.26
SCAMP4-213ENST00000621748 CASP7P55210 303 aa22.9■■□□□ 1.26
SCAMP4-213ENST00000621748 PNMA8AQ86V59 439 aaPredicted RBP22.9■■□□□ 1.26
SCAMP4-213ENST00000621748 TBC1D16Q8TBP0 767 aa22.9■■□□□ 1.26
SCAMP4-213ENST00000621748 ADAMTSL1Q8N6G6 1762 aa22.9■■□□□ 1.26
SCAMP4-213ENST00000621748 YDJCA8MPS7 323 aa22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 RIMBP2O15034 1052 aa22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 RAD17O75943 681 aa22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 LMOD1P29536 600 aaPredicted RBP22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 ANKRD18AQ8IVF6 992 aa22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 GPR101Q96P66 508 aaPredicted RBP22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 GREM2Q9H772 168 aa22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 PODXL2Q9NZ53 605 aa22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 CLEC11AQ9Y240 323 aa22.89■■□□□ 1.25
SCAMP4-213ENST00000621748 BEND3Q5T5X7 828 aa22.88■■□□□ 1.25
SCAMP4-213ENST00000621748 CIAPIN1Q6FI81 312 aa22.88■■□□□ 1.25
SCAMP4-213ENST00000621748 E9PSI1 815 aa22.87■■□□□ 1.25
SCAMP4-213ENST00000621748 ITGBL1O95965 494 aaPredicted RBP22.87■■□□□ 1.25
SCAMP4-213ENST00000621748 SLFN5Q08AF3 891 aa22.87■■□□□ 1.25
SCAMP4-213ENST00000621748 KLRG1Q96E93 195 aa22.87■■□□□ 1.25
SCAMP4-213ENST00000621748 PLA2G12BQ9BX93 195 aa22.87■■□□□ 1.25
SCAMP4-213ENST00000621748 DBNDD1Q9H9R9 158 aa22.87■■□□□ 1.25
SCAMP4-213ENST00000621748 ANKIB1Q9P2G1 1089 aa22.87■■□□□ 1.25
SCAMP4-213ENST00000621748 GPRC5DQ9NZD1 345 aa22.86■■□□□ 1.25
SCAMP4-213ENST00000621748 RTL9Q8NET4 1388 aa22.86■■□□□ 1.25
SCAMP4-213ENST00000621748 PASKQ96RG2 1323 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms