RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 METTL22Q9BUU2 404 aaPredicted RBP22.1■■□□□ 1.13
HMGN3-203ENST00000620514 COL4A1P02462 1669 aa22.1■■□□□ 1.13
HMGN3-203ENST00000620514 SCN4AP35499 1836 aa22.09■■□□□ 1.13
HMGN3-203ENST00000620514 DDX58O95786 925 aaKnown RBP22.09■■□□□ 1.13
HMGN3-203ENST00000620514 EIF6P56537 245 aaKnown RBP22.09■■□□□ 1.13
HMGN3-203ENST00000620514 DPP8Q6V1X1 898 aaPredicted RBP22.09■■□□□ 1.13
HMGN3-203ENST00000620514 G2E3Q7L622 706 aa22.09■■□□□ 1.13
HMGN3-203ENST00000620514 MPNDQ8N594 471 aa22.09■■□□□ 1.13
HMGN3-203ENST00000620514 CELF1Q92879 486 aaKnown RBP22.09■■□□□ 1.13
HMGN3-203ENST00000620514 STK31Q9BXU1 1019 aa22.09■■□□□ 1.13
HMGN3-203ENST00000620514 RTFDC1Q9BY42 306 aaPredicted RBP22.09■■□□□ 1.13
HMGN3-203ENST00000620514 MAP3K2Q9Y2U5 619 aa22.09■■□□□ 1.13
HMGN3-203ENST00000620514 CHADLQ6NUI6 762 aa22.08■■□□□ 1.13
HMGN3-203ENST00000620514 WDR63Q8IWG1 891 aa22.08■■□□□ 1.13
HMGN3-203ENST00000620514 NIM1KQ8IY84 436 aa22.08■■□□□ 1.13
HMGN3-203ENST00000620514 GPC2Q8N158 579 aa22.08■■□□□ 1.13
HMGN3-203ENST00000620514 CCDC191Q8NCU4 936 aa22.08■■□□□ 1.13
HMGN3-203ENST00000620514 HACL1Q9UJ83 578 aa22.08■■□□□ 1.13
HMGN3-203ENST00000620514 GJA3Q9Y6H8 435 aa22.08■■□□□ 1.13
HMGN3-203ENST00000620514 PI4KAP2A4QPH2 592 aa22.07■■□□□ 1.12
HMGN3-203ENST00000620514 KSR2Q6VAB6 950 aa22.07■■□□□ 1.12
HMGN3-203ENST00000620514 PI4KAP1Q8N8J0 262 aa22.07■■□□□ 1.12
HMGN3-203ENST00000620514 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
HMGN3-203ENST00000620514 CWC25Q9NXE8 425 aaPredicted RBP22.07■■□□□ 1.12
HMGN3-203ENST00000620514 SLC4A2P04920 1241 aa22.06■■□□□ 1.12
HMGN3-203ENST00000620514 PCCAP05165 728 aaPredicted RBP22.06■■□□□ 1.12
HMGN3-203ENST00000620514 EAPPQ56P03 285 aaPredicted RBP22.06■■□□□ 1.12
HMGN3-203ENST00000620514 SUPT20HQ8NEM7 779 aa22.06■■□□□ 1.12
HMGN3-203ENST00000620514 IGKV5-2P06315 115 aa22.05■■□□□ 1.12
HMGN3-203ENST00000620514 EPHX2P34913 555 aa22.05■■□□□ 1.12
HMGN3-203ENST00000620514 TMC4Q7Z404 712 aa22.05■■□□□ 1.12
HMGN3-203ENST00000620514 LDHDQ86WU2 507 aa22.05■■□□□ 1.12
HMGN3-203ENST00000620514 DUOX1Q9NRD9 1551 aa22.04■■□□□ 1.12
HMGN3-203ENST00000620514 LRRC37AA6NMS7 1700 aa22.04■■□□□ 1.12
HMGN3-203ENST00000620514 EXOSC9Q06265 439 aaKnown RBP22.04■■□□□ 1.12
HMGN3-203ENST00000620514 VPS33BQ9H267 617 aa22.04■■□□□ 1.12
HMGN3-203ENST00000620514 SEC31BQ9NQW1 1179 aa22.04■■□□□ 1.12
HMGN3-203ENST00000620514 VAMP4O75379 141 aa22.03■■□□□ 1.12
HMGN3-203ENST00000620514 KIAA2012Q0VF49 1180 aa22.03■■□□□ 1.12
HMGN3-203ENST00000620514 KLRG1Q96E93 195 aa22.03■■□□□ 1.12
HMGN3-203ENST00000620514 CCDC85AQ96PX6 553 aaPredicted RBP22.03■■□□□ 1.12
HMGN3-203ENST00000620514 LTBP1Q14766 1721 aa22.03■■□□□ 1.12
HMGN3-203ENST00000620514 SCNN1DP51172 638 aa22.02■■□□□ 1.12
HMGN3-203ENST00000620514 CWF19L2Q2TBE0 894 aaKnown RBP22.02■■□□□ 1.12
HMGN3-203ENST00000620514 ZNRF3Q9ULT6 936 aa22.02■■□□□ 1.12
HMGN3-203ENST00000620514 CLEC11AQ9Y240 323 aa22.02■■□□□ 1.12
HMGN3-203ENST00000620514 PDE8AO60658 829 aa22.01■■□□□ 1.11
HMGN3-203ENST00000620514 EPS15P42566 896 aa22.01■■□□□ 1.11
HMGN3-203ENST00000620514 RPS8P62241 208 aaKnown RBP22.01■■□□□ 1.11
HMGN3-203ENST00000620514 GPSM2P81274 684 aa22.01■■□□□ 1.11
HMGN3-203ENST00000620514 CXCL9Q07325 125 aa22.01■■□□□ 1.11
HMGN3-203ENST00000620514 FLIIQ13045 1269 aa22.01■■□□□ 1.11
HMGN3-203ENST00000620514 NSFL1CQ9UNZ2 370 aaKnown RBP22.01■■□□□ 1.11
HMGN3-203ENST00000620514 ADAMTSL1Q8N6G6 1762 aa22.01■■□□□ 1.11
HMGN3-203ENST00000620514 HSP90B1P14625 803 aaKnown RBP22■■□□□ 1.11
HMGN3-203ENST00000620514 NEXNQ0ZGT2 675 aa22■■□□□ 1.11
HMGN3-203ENST00000620514 CDHR2Q9BYE9 1310 aa22■■□□□ 1.11
HMGN3-203ENST00000620514 NEURL1BA8MQ27 555 aa21.99■■□□□ 1.11
HMGN3-203ENST00000620514 LMOD1P29536 600 aaPredicted RBP21.99■■□□□ 1.11
HMGN3-203ENST00000620514 CCDC152Q4G0S7 254 aa21.99■■□□□ 1.11
HMGN3-203ENST00000620514 PNMA8AQ86V59 439 aaPredicted RBP21.99■■□□□ 1.11
HMGN3-203ENST00000620514 POLLQ9UGP5 575 aa21.99■■□□□ 1.11
HMGN3-203ENST00000620514 FKBP5Q13451 457 aaPredicted RBP21.98■■□□□ 1.11
HMGN3-203ENST00000620514 PASKQ96RG2 1323 aa21.98■■□□□ 1.11
HMGN3-203ENST00000620514 YDJCA8MPS7 323 aa21.97■■□□□ 1.11
HMGN3-203ENST00000620514 C6orf229H3BNL8 230 aa21.97■■□□□ 1.11
HMGN3-203ENST00000620514 RAD17O75943 681 aa21.97■■□□□ 1.11
HMGN3-203ENST00000620514 ITGBL1O95965 494 aaPredicted RBP21.97■■□□□ 1.11
HMGN3-203ENST00000620514 MAP1SQ66K74 1059 aaPredicted RBP21.97■■□□□ 1.11
HMGN3-203ENST00000620514 GPR101Q96P66 508 aaPredicted RBP21.97■■□□□ 1.11
HMGN3-203ENST00000620514 RIMBP2O15034 1052 aa21.96■■□□□ 1.11
HMGN3-203ENST00000620514 WASHC4Q2M389 1173 aa21.96■■□□□ 1.11
HMGN3-203ENST00000620514 CIAPIN1Q6FI81 312 aa21.96■■□□□ 1.11
HMGN3-203ENST00000620514 JMYQ8N9B5 988 aa21.96■■□□□ 1.11
HMGN3-203ENST00000620514 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
HMGN3-203ENST00000620514 H7C1W4 665 aa21.95■■□□□ 1.1
HMGN3-203ENST00000620514 GMPSP49915 693 aaPredicted RBP21.95■■□□□ 1.1
HMGN3-203ENST00000620514 CTSWP56202 376 aa21.95■■□□□ 1.1
HMGN3-203ENST00000620514 UBE3BQ7Z3V4 1068 aa21.95■■□□□ 1.1
HMGN3-203ENST00000620514 TBC1D16Q8TBP0 767 aa21.95■■□□□ 1.1
HMGN3-203ENST00000620514 DNAAF4Q8WXU2 420 aa21.95■■□□□ 1.1
HMGN3-203ENST00000620514 DBNDD1Q9H9R9 158 aa21.95■■□□□ 1.1
HMGN3-203ENST00000620514 ZNF521Q96K83 1311 aa21.95■■□□□ 1.1
HMGN3-203ENST00000620514 GCKRQ14397 625 aa21.94■■□□□ 1.1
HMGN3-203ENST00000620514 CNTROBQ8N137 903 aa21.94■■□□□ 1.1
HMGN3-203ENST00000620514 TTLL11Q8NHH1 800 aa21.94■■□□□ 1.1
HMGN3-203ENST00000620514 CREBZFQ9NS37 354 aa21.94■■□□□ 1.1
HMGN3-203ENST00000620514 GPRC5DQ9NZD1 345 aa21.94■■□□□ 1.1
HMGN3-203ENST00000620514 ANKRD18AQ8IVF6 992 aa21.93■■□□□ 1.1
HMGN3-203ENST00000620514 CACNA1FO60840 1977 aa21.92■■□□□ 1.1
HMGN3-203ENST00000620514 F6X3S4 739 aa21.92■■□□□ 1.1
HMGN3-203ENST00000620514 TNIP1Q15025 636 aa21.92■■□□□ 1.1
HMGN3-203ENST00000620514 DOK7Q18PE1 504 aa21.92■■□□□ 1.1
HMGN3-203ENST00000620514 EYA3Q99504 573 aa21.92■■□□□ 1.1
HMGN3-203ENST00000620514 GREM2Q9H772 168 aa21.92■■□□□ 1.1
HMGN3-203ENST00000620514 PODXL2Q9NZ53 605 aa21.92■■□□□ 1.1
HMGN3-203ENST00000620514 UFL1O94874 794 aa21.91■■□□□ 1.1
HMGN3-203ENST00000620514 CASP7P55210 303 aa21.91■■□□□ 1.1
HMGN3-203ENST00000620514 USP50Q70EL3 339 aaPredicted RBP21.91■■□□□ 1.1
HMGN3-203ENST00000620514 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms