RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 TRIM22Q8IYM9 498 aa23.76■■□□□ 1.39
PCSK6-217ENST00000618548 CCDC82Q8N4S0 544 aa23.76■■□□□ 1.39
PCSK6-217ENST00000618548 CDKL5O76039 1030 aa23.76■■□□□ 1.39
PCSK6-217ENST00000618548 SYKP43405 635 aa23.76■■□□□ 1.39
PCSK6-217ENST00000618548 APOBRQ0VD83 1088 aa23.76■■□□□ 1.39
PCSK6-217ENST00000618548 CCDC191Q8NCU4 936 aa23.76■■□□□ 1.39
PCSK6-217ENST00000618548 CACTINQ8WUQ7 758 aaKnown RBP23.76■■□□□ 1.39
PCSK6-217ENST00000618548 IFIT1P09914 478 aaKnown RBP23.75■■□□□ 1.39
PCSK6-217ENST00000618548 GBP3Q9H0R5 595 aa23.75■■□□□ 1.39
PCSK6-217ENST00000618548 NLRP1Q9C000 1473 aa23.75■■□□□ 1.39
PCSK6-217ENST00000618548 XBP1P17861 261 aa23.75■■□□□ 1.39
PCSK6-217ENST00000618548 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
PCSK6-217ENST00000618548 ADCK5Q3MIX3 580 aa23.75■■□□□ 1.39
PCSK6-217ENST00000618548 USP44Q9H0E7 712 aa23.75■■□□□ 1.39
PCSK6-217ENST00000618548 PTPDC1A2A3K4 754 aa23.74■■□□□ 1.39
PCSK6-217ENST00000618548 ZNF853P0CG23 659 aa23.74■■□□□ 1.39
PCSK6-217ENST00000618548 RPS6KB1P23443 525 aa23.74■■□□□ 1.39
PCSK6-217ENST00000618548 SART3Q15020 963 aaKnown RBP23.74■■□□□ 1.39
PCSK6-217ENST00000618548 EYA1Q99502 592 aa23.74■■□□□ 1.39
PCSK6-217ENST00000618548 HYPKQ9NX55 129 aa23.74■■□□□ 1.39
PCSK6-217ENST00000618548 AOX1Q06278 1338 aa23.74■■□□□ 1.39
PCSK6-217ENST00000618548 EVCP57679 992 aa23.74■■□□□ 1.39
PCSK6-217ENST00000618548 NAA30Q147X3 362 aaPredicted RBP23.74■■□□□ 1.39
PCSK6-217ENST00000618548 NUP133Q8WUM0 1156 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 SRRTQ9BXP5 876 aaKnown RBP23.73■■□□□ 1.39
PCSK6-217ENST00000618548 TPCN1Q9ULQ1 816 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 NCOA3Q9Y6Q9 1424 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 FAM160A1Q05DH4 1040 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 CRACR2AQ9BSW2 395 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 CARD6Q9BX69 1037 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 YTHDC2Q9H6S0 1430 aaKnown RBP23.73■■□□□ 1.39
PCSK6-217ENST00000618548 ESCO1Q5FWF5 840 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 RNF216Q9NWF9 866 aaPredicted RBP23.73■■□□□ 1.39
PCSK6-217ENST00000618548 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 GOLGA6L9A6NEM1 432 aa23.73■■□□□ 1.39
PCSK6-217ENST00000618548 CCDC47Q96A33 483 aaKnown RBP23.73■■□□□ 1.39
PCSK6-217ENST00000618548 LRRC8AQ8IWT6 810 aa23.72■■□□□ 1.39
PCSK6-217ENST00000618548 KCNG4Q8TDN1 519 aa23.72■■□□□ 1.39
PCSK6-217ENST00000618548 SSH2Q76I76 1423 aa23.72■■□□□ 1.39
PCSK6-217ENST00000618548 SNRKQ9NRH2 765 aa23.72■■□□□ 1.39
PCSK6-217ENST00000618548 SPTLC2O15270 562 aa23.72■■□□□ 1.39
PCSK6-217ENST00000618548 CCDC102BQ68D86 513 aa23.71■■□□□ 1.39
PCSK6-217ENST00000618548 CAPN2P17655 700 aa23.71■■□□□ 1.39
PCSK6-217ENST00000618548 RAI14Q9P0K7 980 aa23.71■■□□□ 1.39
PCSK6-217ENST00000618548 PATL2C9JE40 543 aaKnown RBP23.71■■□□□ 1.39
PCSK6-217ENST00000618548 PHACTR2O75167 634 aa23.71■■□□□ 1.39
PCSK6-217ENST00000618548 KRBA2Q6ZNG9 492 aa23.71■■□□□ 1.39
PCSK6-217ENST00000618548 GRM8O00222 908 aa23.7■■□□□ 1.39
PCSK6-217ENST00000618548 LARGE1O95461 756 aa23.7■■□□□ 1.39
PCSK6-217ENST00000618548 KARSQ15046 597 aaKnown RBP23.7■■□□□ 1.39
PCSK6-217ENST00000618548 UBE3BQ7Z3V4 1068 aa23.7■■□□□ 1.39
PCSK6-217ENST00000618548 CCDC144CPQ8IYA2 1237 aa23.7■■□□□ 1.39
PCSK6-217ENST00000618548 BRMS1Q9HCU9 246 aa23.7■■□□□ 1.38
PCSK6-217ENST00000618548 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.7■■□□□ 1.38
PCSK6-217ENST00000618548 TM6SF1Q9BZW5 370 aa23.7■■□□□ 1.38
PCSK6-217ENST00000618548 A0A087WZG4 1122 aa23.7■■□□□ 1.38
PCSK6-217ENST00000618548 RDXP35241 583 aaKnown RBP23.7■■□□□ 1.38
PCSK6-217ENST00000618548 NCBP1Q09161 790 aaKnown RBP23.7■■□□□ 1.38
PCSK6-217ENST00000618548 MCMDC2Q4G0Z9 681 aa23.7■■□□□ 1.38
PCSK6-217ENST00000618548 RSPH14Q9UHP6 348 aa23.7■■□□□ 1.38
PCSK6-217ENST00000618548 KLF18A0A0U1RQI7 1052 aa23.69■■□□□ 1.38
PCSK6-217ENST00000618548 TUBB4AP04350 444 aa23.69■■□□□ 1.38
PCSK6-217ENST00000618548 ZNHIT6Q9NWK9 470 aaKnown RBP23.69■■□□□ 1.38
PCSK6-217ENST00000618548 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.69■■□□□ 1.381e-6■■■■□ 21.2
PCSK6-217ENST00000618548 LSG1Q9H089 658 aaKnown RBP23.69■■□□□ 1.38
PCSK6-217ENST00000618548 STAP2Q9UGK3 403 aa23.69■■□□□ 1.38
PCSK6-217ENST00000618548 FAM135BQ49AJ0 1406 aa23.69■■□□□ 1.38
PCSK6-217ENST00000618548 ATP5J2-PTCD1G3V325 749 aa23.69■■□□□ 1.38
PCSK6-217ENST00000618548 PTCD1O75127 700 aaKnown RBP23.69■■□□□ 1.38
PCSK6-217ENST00000618548 PTCH1Q13635 1447 aa23.69■■□□□ 1.38
PCSK6-217ENST00000618548 MARCH6O60337 910 aa23.68■■□□□ 1.38
PCSK6-217ENST00000618548 CCDC57Q2TAC2 916 aa23.68■■□□□ 1.38
PCSK6-217ENST00000618548 SSH3Q8TE77 659 aa23.68■■□□□ 1.38
PCSK6-217ENST00000618548 KIAA0232Q92628 1395 aa23.68■■□□□ 1.38
PCSK6-217ENST00000618548 A0A087WWV3 80 aa23.68■■□□□ 1.38
PCSK6-217ENST00000618548 KIAA0754O94854 1291 aa23.68■■□□□ 1.38
PCSK6-217ENST00000618548 CCDC129Q6ZRS4 1044 aa23.68■■□□□ 1.38
PCSK6-217ENST00000618548 NCOA5Q9HCD5 579 aaKnown RBP23.68■■□□□ 1.38
PCSK6-217ENST00000618548 IDH1O75874 414 aaKnown RBP23.68■■□□□ 1.38
PCSK6-217ENST00000618548 MAP3K19Q56UN5 1328 aa23.68■■□□□ 1.38
PCSK6-217ENST00000618548 ZSWIM6Q9HCJ5 1215 aa23.67■■□□□ 1.38
PCSK6-217ENST00000618548 PUF60Q9UHX1 559 aaKnown RBP23.67■■□□□ 1.38
PCSK6-217ENST00000618548 PIP4K2AP48426 406 aaPredicted RBP23.67■■□□□ 1.38
PCSK6-217ENST00000618548 VPS18Q9P253 973 aa23.67■■□□□ 1.38
PCSK6-217ENST00000618548 ZNF213O14771 459 aa23.67■■□□□ 1.38
PCSK6-217ENST00000618548 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
PCSK6-217ENST00000618548 MAGEC2Q9UBF1 373 aaPredicted RBP23.67■■□□□ 1.38
PCSK6-217ENST00000618548 TRPM2O94759 1503 aa23.67■■□□□ 1.38
PCSK6-217ENST00000618548 ZSCAN20P17040 1043 aaPredicted RBP23.67■■□□□ 1.38
PCSK6-217ENST00000618548 KLHDC4Q8TBB5 520 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 ADCY10Q96PN6 1610 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 OTUD7BQ6GQQ9 843 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 KSR2Q6VAB6 950 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 DHX32Q7L7V1 743 aaKnown RBP23.66■■□□□ 1.38
PCSK6-217ENST00000618548 MICU3Q86XE3 530 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 CCDC148Q8NFR7 591 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 SMARCC1Q92922 1105 aaPredicted RBP23.66■■□□□ 1.38
PCSK6-217ENST00000618548 LZTFL1Q9NQ48 299 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 ALDH1L1O75891 902 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 XPO4Q9C0E2 1151 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms