RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 RABL6Q3YEC7 729 aaPredicted RBP12.85□□□□□ -0.35
ITGB5-211ENST00000608107 CEP85Q6P2H3 762 aa12.85□□□□□ -0.35
ITGB5-211ENST00000608107 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
ITGB5-211ENST00000608107 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
ITGB5-211ENST00000608107 GREM2Q9H772 168 aa12.85□□□□□ -0.35
ITGB5-211ENST00000608107 SEC31BQ9NQW1 1179 aa12.85□□□□□ -0.35
ITGB5-211ENST00000608107 KLRG2A4D1S0 409 aaPredicted RBP12.84□□□□□ -0.35
ITGB5-211ENST00000608107 CHRNA5P30532 468 aa12.84□□□□□ -0.35
ITGB5-211ENST00000608107 ATP8B2P98198 1209 aa12.84□□□□□ -0.35
ITGB5-211ENST00000608107 SF3B3Q15393 1217 aaKnown RBP12.84□□□□□ -0.35
ITGB5-211ENST00000608107 PPP1R1BQ9UD71 204 aaPredicted RBP12.84□□□□□ -0.35
ITGB5-211ENST00000608107 CHMP3Q9Y3E7 222 aa12.84□□□□□ -0.35
ITGB5-211ENST00000608107 SLC51AQ86UW1 340 aa12.83□□□□□ -0.36
ITGB5-211ENST00000608107 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
ITGB5-211ENST00000608107 KLHDC4Q8TBB5 520 aa12.83□□□□□ -0.36
ITGB5-211ENST00000608107 ZNF594Q96JF6 807 aaPredicted RBP12.83□□□□□ -0.36
ITGB5-211ENST00000608107 CHMP4BQ9H444 224 aaKnown RBP12.83□□□□□ -0.36
ITGB5-211ENST00000608107 DLEC1Q9Y238 1755 aa12.83□□□□□ -0.36
ITGB5-211ENST00000608107 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 SRGNP10124 158 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 DPEP1P16444 411 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 ITGA6P23229 1130 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 PDE6BP35913 854 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 RFX5P48382 616 aaPredicted RBP12.82□□□□□ -0.36
ITGB5-211ENST00000608107 MTX1Q13505 466 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 PA2G4Q9UQ80 394 aaKnown RBP12.82□□□□□ -0.36
ITGB5-211ENST00000608107 HDAC5Q9UQL6 1122 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
ITGB5-211ENST00000608107 BRCA1P38398 1863 aaKnown RBP12.82□□□□□ -0.36
ITGB5-211ENST00000608107 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
ITGB5-211ENST00000608107 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
ITGB5-211ENST00000608107 KCNA3P22001 575 aa12.81□□□□□ -0.36
ITGB5-211ENST00000608107 POLA2Q14181 598 aa12.81□□□□□ -0.36
ITGB5-211ENST00000608107 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
ITGB5-211ENST00000608107 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
ITGB5-211ENST00000608107 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
ITGB5-211ENST00000608107 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
ITGB5-211ENST00000608107 H0YIN7 160 aa12.8□□□□□ -0.36
ITGB5-211ENST00000608107 IGHDP01880 384 aa12.8□□□□□ -0.36
ITGB5-211ENST00000608107 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
ITGB5-211ENST00000608107 CCDC57Q2TAC2 916 aa12.8□□□□□ -0.36
ITGB5-211ENST00000608107 RPAP2Q8IXW5 612 aaPredicted RBP12.8□□□□□ -0.36
ITGB5-211ENST00000608107 SSH3Q8TE77 659 aa12.8□□□□□ -0.36
ITGB5-211ENST00000608107 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
ITGB5-211ENST00000608107 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
ITGB5-211ENST00000608107 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
ITGB5-211ENST00000608107 CD2APQ9Y5K6 639 aa12.8□□□□□ -0.36
ITGB5-211ENST00000608107 LRP5O75197 1615 aa12.8□□□□□ -0.36
ITGB5-211ENST00000608107 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
ITGB5-211ENST00000608107 ANKRD18BA2A2Z9 1011 aa12.79□□□□□ -0.36
ITGB5-211ENST00000608107 NPR1P16066 1061 aa12.79□□□□□ -0.36
ITGB5-211ENST00000608107 HOXA10P31260 410 aaPredicted RBP12.79□□□□□ -0.36
ITGB5-211ENST00000608107 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
ITGB5-211ENST00000608107 AAMPQ13685 434 aa12.79□□□□□ -0.36
ITGB5-211ENST00000608107 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
ITGB5-211ENST00000608107 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
ITGB5-211ENST00000608107 RBM17Q96I25 401 aaKnown RBP12.79□□□□□ -0.36
ITGB5-211ENST00000608107 SIL1Q9H173 461 aa12.79□□□□□ -0.36
ITGB5-211ENST00000608107 TGFB2P61812 414 aa12.78□□□□□ -0.36
ITGB5-211ENST00000608107 GRAPQ13588 217 aa12.78□□□□□ -0.36
ITGB5-211ENST00000608107 LRRC24Q50LG9 513 aa12.78□□□□□ -0.36
ITGB5-211ENST00000608107 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
ITGB5-211ENST00000608107 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
ITGB5-211ENST00000608107 A0A1B0GUL6 1792 aa12.78□□□□□ -0.36
ITGB5-211ENST00000608107 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
ITGB5-211ENST00000608107 TAF7LQ5H9L4 462 aa12.77□□□□□ -0.37
ITGB5-211ENST00000608107 STYK1Q6J9G0 422 aa12.77□□□□□ -0.37
ITGB5-211ENST00000608107 OLFM4Q6UX06 510 aa12.77□□□□□ -0.37
ITGB5-211ENST00000608107 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.37
ITGB5-211ENST00000608107 SYT17Q9BSW7 474 aa12.77□□□□□ -0.37
ITGB5-211ENST00000608107 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
ITGB5-211ENST00000608107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.77□□□□□ -0.37
ITGB5-211ENST00000608107 SURF6O75683 361 aaKnown RBP12.76□□□□□ -0.37
ITGB5-211ENST00000608107 B4GALNT3Q6L9W6 998 aa12.76□□□□□ -0.37
ITGB5-211ENST00000608107 ATG9AQ7Z3C6 839 aa12.76□□□□□ -0.37
ITGB5-211ENST00000608107 CDC5LQ99459 802 aaKnown RBP12.76□□□□□ -0.37
ITGB5-211ENST00000608107 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
ITGB5-211ENST00000608107 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
ITGB5-211ENST00000608107 EXOC6BQ9Y2D4 811 aa12.76□□□□□ -0.37
ITGB5-211ENST00000608107 APBB1O00213 710 aa12.75□□□□□ -0.37
ITGB5-211ENST00000608107 HMMRO75330 724 aa12.75□□□□□ -0.37
ITGB5-211ENST00000608107 IGHMBP2P38935 993 aaKnown RBP12.75□□□□□ -0.37
ITGB5-211ENST00000608107 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
ITGB5-211ENST00000608107 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
ITGB5-211ENST00000608107 LDHAL6AQ6ZMR3 332 aa12.75□□□□□ -0.37
ITGB5-211ENST00000608107 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
ITGB5-211ENST00000608107 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
ITGB5-211ENST00000608107 WTIPA6NIX2 430 aaPredicted RBP12.74□□□□□ -0.37
ITGB5-211ENST00000608107 EYA2O00167 538 aa12.74□□□□□ -0.37
ITGB5-211ENST00000608107 PPEF1O14829 653 aaPredicted RBP12.74□□□□□ -0.37
ITGB5-211ENST00000608107 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
ITGB5-211ENST00000608107 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
ITGB5-211ENST00000608107 TTLL6Q8N841 843 aa12.74□□□□□ -0.37
ITGB5-211ENST00000608107 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
ITGB5-211ENST00000608107 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
ITGB5-211ENST00000608107 MPHOSPH8Q99549 860 aa12.74□□□□□ -0.37
ITGB5-211ENST00000608107 RWDD1Q9H446 243 aaPredicted RBP12.74□□□□□ -0.37
ITGB5-211ENST00000608107 CNNM1Q9NRU3 951 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms