RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 NYXQ9GZU5 481 aa15.7■□□□□ 0.1
ZNF548-210ENST00000600442 NARFQ9UHQ1 456 aa15.7■□□□□ 0.1
ZNF548-210ENST00000600442 ARFGEF2Q9Y6D5 1785 aa15.7■□□□□ 0.1
ZNF548-210ENST00000600442 SH3TC1Q8TE82 1336 aa15.69■□□□□ 0.1
ZNF548-210ENST00000600442 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
ZNF548-210ENST00000600442 TAF7LQ5H9L4 462 aa15.69■□□□□ 0.1
ZNF548-210ENST00000600442 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
ZNF548-210ENST00000600442 NLGN1Q8N2Q7 840 aa15.69■□□□□ 0.1
ZNF548-210ENST00000600442 NIP7Q9Y221 180 aaKnown RBP eCLIP15.69■□□□□ 0.1
ZNF548-210ENST00000600442 BCS1LQ9Y276 419 aa15.69■□□□□ 0.1
ZNF548-210ENST00000600442 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
ZNF548-210ENST00000600442 MYH14Q7Z406 1995 aaKnown RBP15.69■□□□□ 0.1
ZNF548-210ENST00000600442 TOMM70O94826 608 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 PDE4AP27815 886 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 CASP7P55210 303 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 CASC1Q6TDU7 716 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 FAM89AQ96GI7 184 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 SETDB2Q96T68 719 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 UPF2Q9HAU5 1272 aaKnown RBP15.68■□□□□ 0.1
ZNF548-210ENST00000600442 COPRSQ9NQ92 184 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
ZNF548-210ENST00000600442 IRS4O14654 1257 aaPredicted RBP15.67■□□□□ 0.1
ZNF548-210ENST00000600442 NPHP1O15259 732 aa15.67■□□□□ 0.1
ZNF548-210ENST00000600442 PDE8AO60658 829 aa15.67■□□□□ 0.1
ZNF548-210ENST00000600442 APLP1P51693 650 aa15.67■□□□□ 0.1
ZNF548-210ENST00000600442 IFIT5Q13325 482 aaKnown RBP15.67■□□□□ 0.1
ZNF548-210ENST00000600442 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
ZNF548-210ENST00000600442 RTL5Q5HYW3 569 aaPredicted RBP15.67■□□□□ 0.1
ZNF548-210ENST00000600442 RHPN1Q8TCX5 695 aa15.67■□□□□ 0.1
ZNF548-210ENST00000600442 ARHGEF1Q92888 912 aaKnown RBP15.67■□□□□ 0.1
ZNF548-210ENST00000600442 COL5A3P25940 1745 aaPredicted RBP15.67■□□□□ 0.1
ZNF548-210ENST00000600442 IFIT2P09913 472 aaKnown RBP15.66■□□□□ 0.1
ZNF548-210ENST00000600442 DPEP1P16444 411 aa15.66■□□□□ 0.1
ZNF548-210ENST00000600442 FOXO4P98177 505 aa15.66■□□□□ 0.1
ZNF548-210ENST00000600442 KAZALD1Q96I82 304 aa15.66■□□□□ 0.1
ZNF548-210ENST00000600442 BCL11AQ9H165 835 aa15.66■□□□□ 0.1
ZNF548-210ENST00000600442 C4AP0C0L4 1744 aa15.65■□□□□ 0.1
ZNF548-210ENST00000600442 ERC2O15083 957 aa15.65■□□□□ 0.1
ZNF548-210ENST00000600442 DNAJC5GQ8N7S2 189 aa15.65■□□□□ 0.1
ZNF548-210ENST00000600442 JARID2Q92833 1246 aaPredicted RBP15.65■□□□□ 0.1
ZNF548-210ENST00000600442 BACH2Q9BYV9 841 aa15.65■□□□□ 0.1
ZNF548-210ENST00000600442 ARFGEF1Q9Y6D6 1849 aa15.65■□□□□ 0.1
ZNF548-210ENST00000600442 C10orf71Q711Q0 1435 aa15.65■□□□□ 0.1
ZNF548-210ENST00000600442 AOX1Q06278 1338 aa15.65■□□□□ 0.1
ZNF548-210ENST00000600442 ANKRD18BA2A2Z9 1011 aa15.64■□□□□ 0.09
ZNF548-210ENST00000600442 GYS1P13807 737 aa15.64■□□□□ 0.09
ZNF548-210ENST00000600442 MX1P20591 662 aa15.64■□□□□ 0.09
ZNF548-210ENST00000600442 IL15P40933 162 aaPredicted RBP15.64■□□□□ 0.09
ZNF548-210ENST00000600442 CTSWP56202 376 aa15.64■□□□□ 0.09
ZNF548-210ENST00000600442 EPHA10Q5JZY3 1008 aa15.64■□□□□ 0.09
ZNF548-210ENST00000600442 USPL1Q5W0Q7 1092 aa15.64■□□□□ 0.09
ZNF548-210ENST00000600442 TPTE2Q6XPS3 522 aa15.64■□□□□ 0.09
ZNF548-210ENST00000600442 NMRK2Q9NPI5 230 aa15.64■□□□□ 0.09
ZNF548-210ENST00000600442 SMARCA5O60264 1052 aaPredicted RBP15.63■□□□□ 0.09
ZNF548-210ENST00000600442 CIAO1O76071 339 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 CSF1RP07333 972 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 CCDC152Q4G0S7 254 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 SUSD4Q5VX71 490 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 SKAP1Q86WV1 359 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 PLEKHM2Q8IWE5 1019 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 OSBPL3Q9H4L5 887 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 TSHZ2Q9NRE2 1034 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 PARP3Q9Y6F1 533 aa15.63■□□□□ 0.09
ZNF548-210ENST00000600442 AFDNP55196 1824 aaKnown RBP15.63■□□□□ 0.09
ZNF548-210ENST00000600442 KCNA3P22001 575 aa15.62■□□□□ 0.09
ZNF548-210ENST00000600442 NBPF5PQ86XG9 351 aaPredicted RBP15.62■□□□□ 0.09
ZNF548-210ENST00000600442 SIL1Q9H173 461 aa15.62■□□□□ 0.09
ZNF548-210ENST00000600442 AKAP2Q9Y2D5 859 aa15.62■□□□□ 0.09
ZNF548-210ENST00000600442 SBF1O95248 1867 aa15.62■□□□□ 0.09
ZNF548-210ENST00000600442 UBN2Q6ZU65 1347 aa15.62■□□□□ 0.09
ZNF548-210ENST00000600442 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
ZNF548-210ENST00000600442 WDR90Q96KV7 1748 aa15.61■□□□□ 0.09
ZNF548-210ENST00000600442 PDE1AP54750 535 aa15.61■□□□□ 0.09
ZNF548-210ENST00000600442 PTPN12Q05209 780 aaKnown RBP15.61■□□□□ 0.09
ZNF548-210ENST00000600442 TTC22Q5TAA0 569 aa15.61■□□□□ 0.09
ZNF548-210ENST00000600442 IL1RAPL2Q9NP60 686 aa15.61■□□□□ 0.09
ZNF548-210ENST00000600442 STAP2Q9UGK3 403 aa15.61■□□□□ 0.09
ZNF548-210ENST00000600442 PA2G4Q9UQ80 394 aaKnown RBP15.61■□□□□ 0.09
ZNF548-210ENST00000600442 TTC41PQ6P2S7 1318 aa15.61■□□□□ 0.09
ZNF548-210ENST00000600442 FAM177BA6PVY3 158 aa15.6■□□□□ 0.09
ZNF548-210ENST00000600442 EYA2O00167 538 aa15.6■□□□□ 0.09
ZNF548-210ENST00000600442 RFX5P48382 616 aaPredicted RBP15.6■□□□□ 0.09
ZNF548-210ENST00000600442 C9orf131Q5VYM1 1079 aa15.6■□□□□ 0.09
ZNF548-210ENST00000600442 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
ZNF548-210ENST00000600442 AACSQ86V21 672 aa15.6■□□□□ 0.09
ZNF548-210ENST00000600442 TTLL11Q8NHH1 800 aa15.6■□□□□ 0.09
ZNF548-210ENST00000600442 CEP126Q9P2H0 1117 aa15.6■□□□□ 0.09
ZNF548-210ENST00000600442 GLRX3O76003 335 aaKnown RBP15.59■□□□□ 0.09
ZNF548-210ENST00000600442 NTSR2O95665 410 aa15.59■□□□□ 0.09
ZNF548-210ENST00000600442 C16orf71Q8IYS4 520 aaPredicted RBP15.59■□□□□ 0.09
ZNF548-210ENST00000600442 RBM46Q8TBY0 533 aaKnown RBP15.59■□□□□ 0.09
ZNF548-210ENST00000600442 NLRP3Q96P20 1036 aa15.59■□□□□ 0.09
ZNF548-210ENST00000600442 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
ZNF548-210ENST00000600442 GPR108Q9NPR9 543 aa15.59■□□□□ 0.09
ZNF548-210ENST00000600442 ECHDC1Q9NTX5 307 aa15.59■□□□□ 0.09
ZNF548-210ENST00000600442 PIM2Q9P1W9 311 aa15.59■□□□□ 0.09
ZNF548-210ENST00000600442 CARMIL3Q8ND23 1372 aa15.59■□□□□ 0.09
ZNF548-210ENST00000600442 CDC45O75419 566 aa15.58■□□□□ 0.08
ZNF548-210ENST00000600442 ITGA6P23229 1130 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms