RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SUPT20HQ8NEM7 779 aa19.37■□□□□ 0.69
LIG1-215ENST00000597901 JARID2Q92833 1246 aaPredicted RBP19.37■□□□□ 0.69
LIG1-215ENST00000597901 TAF1DQ9H5J8 278 aaPredicted RBP19.37■□□□□ 0.69
LIG1-215ENST00000597901 CWC25Q9NXE8 425 aaPredicted RBP19.37■□□□□ 0.69
LIG1-215ENST00000597901 CACNA1SQ13698 1873 aa19.37■□□□□ 0.69
LIG1-215ENST00000597901 FANCIQ9NVI1 1328 aa19.36■□□□□ 0.69
LIG1-215ENST00000597901 PCCAP05165 728 aaPredicted RBP19.36■□□□□ 0.69
LIG1-215ENST00000597901 POTEIP0CG38 1075 aa19.36■□□□□ 0.69
LIG1-215ENST00000597901 POTEJP0CG39 1038 aa19.36■□□□□ 0.69
LIG1-215ENST00000597901 HSP90B1P14625 803 aaKnown RBP19.36■□□□□ 0.69
LIG1-215ENST00000597901 HTRA3P83110 453 aa19.36■□□□□ 0.69
LIG1-215ENST00000597901 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
LIG1-215ENST00000597901 TMC4Q7Z404 712 aa19.36■□□□□ 0.69
LIG1-215ENST00000597901 CELF1Q92879 486 aaKnown RBP19.36■□□□□ 0.69
LIG1-215ENST00000597901 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
LIG1-215ENST00000597901 TIAM2Q8IVF5 1701 aa19.35■□□□□ 0.69
LIG1-215ENST00000597901 WDR90Q96KV7 1748 aa19.35■□□□□ 0.69
LIG1-215ENST00000597901 PPIP5K2O43314 1243 aa19.35■□□□□ 0.69
LIG1-215ENST00000597901 CHADLQ6NUI6 762 aa19.35■□□□□ 0.69
LIG1-215ENST00000597901 HACL1Q9UJ83 578 aa19.35■□□□□ 0.69
LIG1-215ENST00000597901 GJA3Q9Y6H8 435 aa19.35■□□□□ 0.69
LIG1-215ENST00000597901 DICER1Q9UPY3 1922 aaKnown RBP19.34■□□□□ 0.69
LIG1-215ENST00000597901 IGKV5-2P06315 115 aa19.34■□□□□ 0.69
LIG1-215ENST00000597901 RPS8P62241 208 aaKnown RBP19.34■□□□□ 0.69
LIG1-215ENST00000597901 AOC3Q16853 763 aa19.34■□□□□ 0.69
LIG1-215ENST00000597901 NIM1KQ8IY84 436 aa19.34■□□□□ 0.69
LIG1-215ENST00000597901 PDE8AO60658 829 aa19.33■□□□□ 0.68
LIG1-215ENST00000597901 CEP350Q5VT06 3117 aa19.32■□□□□ 0.68
LIG1-215ENST00000597901 EPHX2P34913 555 aa19.32■□□□□ 0.68
LIG1-215ENST00000597901 NEXNQ0ZGT2 675 aa19.32■□□□□ 0.68
LIG1-215ENST00000597901 KLRG1Q96E93 195 aa19.32■□□□□ 0.68
LIG1-215ENST00000597901 SEC31BQ9NQW1 1179 aa19.32■□□□□ 0.68
LIG1-215ENST00000597901 ZNRF3Q9ULT6 936 aa19.32■□□□□ 0.68
LIG1-215ENST00000597901 NSFL1CQ9UNZ2 370 aaKnown RBP19.32■□□□□ 0.68
LIG1-215ENST00000597901 KIAA2012Q0VF49 1180 aa19.31■□□□□ 0.68
LIG1-215ENST00000597901 LDHDQ86WU2 507 aa19.31■□□□□ 0.68
LIG1-215ENST00000597901 MYH16Q9H6N6 1097 aa19.31■□□□□ 0.68
LIG1-215ENST00000597901 CLEC11AQ9Y240 323 aa19.31■□□□□ 0.68
LIG1-215ENST00000597901 ANKRD36CQ5JPF3 1778 aa19.31■□□□□ 0.68
LIG1-215ENST00000597901 CXCL9Q07325 125 aa19.3■□□□□ 0.68
LIG1-215ENST00000597901 FLIIQ13045 1269 aa19.3■□□□□ 0.68
LIG1-215ENST00000597901 CWF19L2Q2TBE0 894 aaKnown RBP19.3■□□□□ 0.68
LIG1-215ENST00000597901 CCDC152Q4G0S7 254 aa19.3■□□□□ 0.68
LIG1-215ENST00000597901 EAPPQ56P03 285 aaPredicted RBP19.3■□□□□ 0.68
LIG1-215ENST00000597901 PNMA8AQ86V59 439 aaPredicted RBP19.3■□□□□ 0.68
LIG1-215ENST00000597901 COL4A5P29400 1685 aa19.3■□□□□ 0.68
LIG1-215ENST00000597901 NEURL1BA8MQ27 555 aa19.29■□□□□ 0.68
LIG1-215ENST00000597901 H7C1W4 665 aa19.29■□□□□ 0.68
LIG1-215ENST00000597901 GPSM2P81274 684 aa19.29■□□□□ 0.68
LIG1-215ENST00000597901 IFFO2Q5TF58 517 aa19.29■□□□□ 0.68
LIG1-215ENST00000597901 CDHR2Q9BYE9 1310 aa19.28■□□□□ 0.68
LIG1-215ENST00000597901 FKBP5Q13451 457 aaPredicted RBP19.28■□□□□ 0.68
LIG1-215ENST00000597901 WASHC4Q2M389 1173 aa19.28■□□□□ 0.68
LIG1-215ENST00000597901 CCDC85AQ96PX6 553 aaPredicted RBP19.28■□□□□ 0.68
LIG1-215ENST00000597901 POLLQ9UGP5 575 aa19.28■□□□□ 0.68
LIG1-215ENST00000597901 C6orf229H3BNL8 230 aa19.27■□□□□ 0.68
LIG1-215ENST00000597901 ITGBL1O95965 494 aaPredicted RBP19.27■□□□□ 0.68
LIG1-215ENST00000597901 LMOD1P29536 600 aaPredicted RBP19.27■□□□□ 0.68
LIG1-215ENST00000597901 EPS15P42566 896 aa19.27■□□□□ 0.68
LIG1-215ENST00000597901 SCNN1DP51172 638 aa19.27■□□□□ 0.68
LIG1-215ENST00000597901 DNAAF4Q8WXU2 420 aa19.27■□□□□ 0.68
LIG1-215ENST00000597901 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
LIG1-215ENST00000597901 CIAPIN1Q6FI81 312 aa19.26■□□□□ 0.67
LIG1-215ENST00000597901 TTLL11Q8NHH1 800 aa19.26■□□□□ 0.67
LIG1-215ENST00000597901 ZNF521Q96K83 1311 aa19.25■□□□□ 0.67
LIG1-215ENST00000597901 RAD17O75943 681 aa19.25■□□□□ 0.67
LIG1-215ENST00000597901 GCKRQ14397 625 aa19.25■□□□□ 0.67
LIG1-215ENST00000597901 TNIP1Q15025 636 aa19.25■□□□□ 0.67
LIG1-215ENST00000597901 TBC1D16Q8TBP0 767 aa19.25■□□□□ 0.67
LIG1-215ENST00000597901 YDJCA8MPS7 323 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 CTSWP56202 376 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 UBE3BQ7Z3V4 1068 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 ANKRD18AQ8IVF6 992 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 CNTROBQ8N137 903 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 JMYQ8N9B5 988 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 LINS1Q8NG48 757 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 PODXL2Q9NZ53 605 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 LAMB2P55268 1798 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 PASKQ96RG2 1323 aa19.24■□□□□ 0.67
LIG1-215ENST00000597901 DDX60Q8IY21 1712 aaKnown RBP19.23■□□□□ 0.67
LIG1-215ENST00000597901 MAP1SQ66K74 1059 aaPredicted RBP19.23■□□□□ 0.67
LIG1-215ENST00000597901 USP50Q70EL3 339 aaPredicted RBP19.23■□□□□ 0.67
LIG1-215ENST00000597901 EYA3Q99504 573 aa19.23■□□□□ 0.67
LIG1-215ENST00000597901 ZC3H12CQ9C0D7 883 aaKnown RBP19.23■□□□□ 0.67
LIG1-215ENST00000597901 GPRC5DQ9NZD1 345 aa19.23■□□□□ 0.67
LIG1-215ENST00000597901 ANKIB1Q9P2G1 1089 aa19.23■□□□□ 0.67
LIG1-215ENST00000597901 F6X3S4 739 aa19.22■□□□□ 0.67
LIG1-215ENST00000597901 GMPSP49915 693 aaPredicted RBP19.22■□□□□ 0.67
LIG1-215ENST00000597901 CASP7P55210 303 aa19.22■□□□□ 0.67
LIG1-215ENST00000597901 DOK7Q18PE1 504 aa19.22■□□□□ 0.67
LIG1-215ENST00000597901 GPR101Q96P66 508 aaPredicted RBP19.22■□□□□ 0.67
LIG1-215ENST00000597901 GREM2Q9H772 168 aa19.22■□□□□ 0.67
LIG1-215ENST00000597901 DBNDD1Q9H9R9 158 aa19.22■□□□□ 0.67
LIG1-215ENST00000597901 CDC5LQ99459 802 aaKnown RBP19.21■□□□□ 0.67
LIG1-215ENST00000597901 PLA2G12BQ9BX93 195 aa19.21■□□□□ 0.67
LIG1-215ENST00000597901 BCL2L13Q9BXK5 485 aa19.21■□□□□ 0.67
LIG1-215ENST00000597901 CREBZFQ9NS37 354 aa19.21■□□□□ 0.67
LIG1-215ENST00000597901 ADARB2Q9NS39 739 aaKnown RBP19.21■□□□□ 0.67
LIG1-215ENST00000597901 SCN4AP35499 1836 aa19.21■□□□□ 0.67
LIG1-215ENST00000597901 TAF1P21675 1872 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms