RNA–Protein interactions for RNA: ENST00000597198.5

IRF3-217, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IRF3, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-217ENST00000597198 ZBTB7BO15156 539 aaPredicted RBP20.47■□□□□ 0.87
IRF3-217ENST00000597198 MVPQ14764 893 aaKnown RBP20.47■□□□□ 0.87
IRF3-217ENST00000597198 NLRP3Q96P20 1036 aa20.47■□□□□ 0.87
IRF3-217ENST00000597198 PDZRN3Q9UPQ7 1066 aa20.47■□□□□ 0.87
IRF3-217ENST00000597198 SUPT16HQ9Y5B9 1047 aaKnown RBP20.47■□□□□ 0.87
IRF3-217ENST00000597198 SPEF2Q9C093 1822 aa20.46■□□□□ 0.87
IRF3-217ENST00000597198 HOXA10P31260 410 aaPredicted RBP20.46■□□□□ 0.87
IRF3-217ENST00000597198 CTSWP56202 376 aa20.46■□□□□ 0.87
IRF3-217ENST00000597198 ITPRIPQ8IWB1 547 aa20.46■□□□□ 0.87
IRF3-217ENST00000597198 LRRC37AA6NMS7 1700 aa20.45■□□□□ 0.86
IRF3-217ENST00000597198 CSF1RP07333 972 aa20.45■□□□□ 0.86
IRF3-217ENST00000597198 C2CD5Q86YS7 1000 aa20.45■□□□□ 0.86
IRF3-217ENST00000597198 TTLL11Q8NHH1 800 aa20.45■□□□□ 0.86
IRF3-217ENST00000597198 COG6Q9Y2V7 657 aa20.45■□□□□ 0.86
IRF3-217ENST00000597198 RTL9Q8NET4 1388 aa20.45■□□□□ 0.86
IRF3-217ENST00000597198 GRIN3BO60391 1043 aa20.44■□□□□ 0.86
IRF3-217ENST00000597198 RABL6Q3YEC7 729 aaPredicted RBP20.44■□□□□ 0.86
IRF3-217ENST00000597198 H0YIN7 160 aa20.44■□□□□ 0.86
IRF3-217ENST00000597198 HSP90B1P14625 803 aaKnown RBP20.44■□□□□ 0.86
IRF3-217ENST00000597198 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
IRF3-217ENST00000597198 A0A1B0GUL6 1792 aa20.43■□□□□ 0.86
IRF3-217ENST00000597198 NPR1P16066 1061 aa20.43■□□□□ 0.86
IRF3-217ENST00000597198 STYK1Q6J9G0 422 aa20.43■□□□□ 0.86
IRF3-217ENST00000597198 PELP1Q8IZL8 1130 aaKnown RBP20.43■□□□□ 0.86
IRF3-217ENST00000597198 MASTLQ96GX5 879 aa20.43■□□□□ 0.86
IRF3-217ENST00000597198 GNAI3P08754 354 aa20.42■□□□□ 0.86
IRF3-217ENST00000597198 UBTFL1P0CB47 393 aaPredicted RBP20.42■□□□□ 0.86
IRF3-217ENST00000597198 BICC1Q9H694 974 aaKnown RBP20.42■□□□□ 0.86
IRF3-217ENST00000597198 GREM2Q9H772 168 aa20.41■□□□□ 0.86
IRF3-217ENST00000597198 LTBP1Q14766 1721 aa20.41■□□□□ 0.86
IRF3-217ENST00000597198 CRAMP1Q96RY5 1269 aa20.41■□□□□ 0.86
IRF3-217ENST00000597198 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
IRF3-217ENST00000597198 LRRFIP2Q9Y608 721 aaKnown RBP20.41■□□□□ 0.86
IRF3-217ENST00000597198 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
IRF3-217ENST00000597198 FAM161AQ3B820 660 aa20.4■□□□□ 0.86
IRF3-217ENST00000597198 ZBTB40Q9NUA8 1239 aa20.4■□□□□ 0.86
IRF3-217ENST00000597198 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.86
IRF3-217ENST00000597198 CCDC152Q4G0S7 254 aa20.39■□□□□ 0.86
IRF3-217ENST00000597198 LMBR1LQ6UX01 489 aa20.39■□□□□ 0.86
IRF3-217ENST00000597198 RPGRQ92834 1020 aaKnown RBP20.39■□□□□ 0.86
IRF3-217ENST00000597198 FER1L6Q2WGJ9 1857 aa20.39■□□□□ 0.85
IRF3-217ENST00000597198 CCDC85AQ96PX6 553 aaPredicted RBP20.39■□□□□ 0.85
IRF3-217ENST00000597198 SEC31BQ9NQW1 1179 aa20.39■□□□□ 0.85
IRF3-217ENST00000597198 PIM2Q9P1W9 311 aa20.39■□□□□ 0.85
IRF3-217ENST00000597198 MTX1Q13505 466 aa20.38■□□□□ 0.85
IRF3-217ENST00000597198 PRPF40BQ6NWY9 871 aaKnown RBP20.38■□□□□ 0.85
IRF3-217ENST00000597198 SLC51AQ86UW1 340 aa20.38■□□□□ 0.85
IRF3-217ENST00000597198 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
IRF3-217ENST00000597198 TTLL6Q8N841 843 aa20.37■□□□□ 0.85
IRF3-217ENST00000597198 C7orf43Q8WVR3 580 aa20.37■□□□□ 0.85
IRF3-217ENST00000597198 CNKSR1Q969H4 720 aa20.37■□□□□ 0.85
IRF3-217ENST00000597198 ZNF622Q969S3 477 aaKnown RBP eCLIP20.37■□□□□ 0.85
IRF3-217ENST00000597198 RBM17Q96I25 401 aaKnown RBP20.37■□□□□ 0.85
IRF3-217ENST00000597198 GNAI2P04899 355 aa20.36■□□□□ 0.85
IRF3-217ENST00000597198 GRAPQ13588 217 aa20.36■□□□□ 0.85
IRF3-217ENST00000597198 GRAPLQ8TC17 118 aaPredicted RBP20.36■□□□□ 0.85
IRF3-217ENST00000597198 ITGA6P23229 1130 aa20.36■□□□□ 0.85
IRF3-217ENST00000597198 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
IRF3-217ENST00000597198 DDX46Q7L014 1031 aaKnown RBP20.36■□□□□ 0.85
IRF3-217ENST00000597198 CRBNQ96SW2 442 aa20.36■□□□□ 0.85
IRF3-217ENST00000597198 C1orf115Q9H7X2 142 aa20.36■□□□□ 0.85
IRF3-217ENST00000597198 WWC3Q9ULE0 1092 aa20.36■□□□□ 0.85
IRF3-217ENST00000597198 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
IRF3-217ENST00000597198 RFX5P48382 616 aaPredicted RBP20.35■□□□□ 0.85
IRF3-217ENST00000597198 DALRD3Q5D0E6 543 aaKnown RBP20.34■□□□□ 0.85
IRF3-217ENST00000597198 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
IRF3-217ENST00000597198 DUOX1Q9NRD9 1551 aa20.34■□□□□ 0.85
IRF3-217ENST00000597198 C1QTNF8P60827 252 aa20.33■□□□□ 0.84
IRF3-217ENST00000597198 PNMA6EA0A0J9YXQ4 647 aa20.32■□□□□ 0.84
IRF3-217ENST00000597198 BBOX1O75936 387 aa20.32■□□□□ 0.84
IRF3-217ENST00000597198 RPS8P62241 208 aaKnown RBP20.32■□□□□ 0.84
IRF3-217ENST00000597198 OLFM4Q6UX06 510 aa20.32■□□□□ 0.84
IRF3-217ENST00000597198 BCS1LQ9Y276 419 aa20.32■□□□□ 0.84
IRF3-217ENST00000597198 SBF1O95248 1867 aa20.32■□□□□ 0.84
IRF3-217ENST00000597198 PPEF1O14829 653 aaPredicted RBP20.31■□□□□ 0.84
IRF3-217ENST00000597198 IFIT5Q13325 482 aaKnown RBP20.31■□□□□ 0.84
IRF3-217ENST00000597198 CEP85Q6P2H3 762 aa20.31■□□□□ 0.84
IRF3-217ENST00000597198 CDC5LQ99459 802 aaKnown RBP20.31■□□□□ 0.84
IRF3-217ENST00000597198 ANKRD18BA2A2Z9 1011 aa20.3■□□□□ 0.84
IRF3-217ENST00000597198 POLA2Q14181 598 aa20.3■□□□□ 0.84
IRF3-217ENST00000597198 CHMP4BQ9H444 224 aaKnown RBP20.3■□□□□ 0.84
IRF3-217ENST00000597198 CHMP3Q9Y3E7 222 aa20.3■□□□□ 0.84
IRF3-217ENST00000597198 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
IRF3-217ENST00000597198 PTPN12Q05209 780 aaKnown RBP20.3■□□□□ 0.84
IRF3-217ENST00000597198 CCDC57Q2TAC2 916 aa20.3■□□□□ 0.84
IRF3-217ENST00000597198 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
IRF3-217ENST00000597198 SIRT2Q8IXJ6 389 aa20.3■□□□□ 0.84
IRF3-217ENST00000597198 ZNF594Q96JF6 807 aaPredicted RBP20.3■□□□□ 0.84
IRF3-217ENST00000597198 CCDC88AQ3V6T2 1871 aa20.29■□□□□ 0.84
IRF3-217ENST00000597198 C21orf2O43822 256 aa20.29■□□□□ 0.84
IRF3-217ENST00000597198 TMC4Q7Z404 712 aa20.29■□□□□ 0.84
IRF3-217ENST00000597198 KLHDC4Q8TBB5 520 aa20.29■□□□□ 0.84
IRF3-217ENST00000597198 SSH3Q8TE77 659 aa20.29■□□□□ 0.84
IRF3-217ENST00000597198 BSDC1Q9NW68 430 aaPredicted RBP20.29■□□□□ 0.84
IRF3-217ENST00000597198 SRGAP3O43295 1099 aa20.28■□□□□ 0.84
IRF3-217ENST00000597198 ATP8B2P98198 1209 aa20.28■□□□□ 0.84
IRF3-217ENST00000597198 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
IRF3-217ENST00000597198 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
IRF3-217ENST00000597198 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.84
IRF3-217ENST00000597198 COPRSQ9NQ92 184 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms