RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 FOXO4P98177 505 aa18.71■□□□□ 0.59
ARHGEF1-214ENST00000596957 SF3B3Q15393 1217 aaKnown RBP18.71■□□□□ 0.59
ARHGEF1-214ENST00000596957 EPHA10Q5JZY3 1008 aa18.71■□□□□ 0.59
ARHGEF1-214ENST00000596957 NLGN2Q8NFZ4 835 aa18.71■□□□□ 0.59
ARHGEF1-214ENST00000596957 SYT17Q9BSW7 474 aa18.71■□□□□ 0.59
ARHGEF1-214ENST00000596957 LRP5O75197 1615 aa18.71■□□□□ 0.58
ARHGEF1-214ENST00000596957 KLRG2A4D1S0 409 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF1-214ENST00000596957 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
ARHGEF1-214ENST00000596957 CRY2Q49AN0 593 aa18.7■□□□□ 0.58
ARHGEF1-214ENST00000596957 TAF7LQ5H9L4 462 aa18.7■□□□□ 0.58
ARHGEF1-214ENST00000596957 TTLL11Q8NHH1 800 aa18.7■□□□□ 0.58
ARHGEF1-214ENST00000596957 GREM2Q9H772 168 aa18.7■□□□□ 0.58
ARHGEF1-214ENST00000596957 WWC3Q9ULE0 1092 aa18.7■□□□□ 0.58
ARHGEF1-214ENST00000596957 N4BP2Q86UW6 1770 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF1-214ENST00000596957 ALDH1B1P30837 517 aa18.69■□□□□ 0.58
ARHGEF1-214ENST00000596957 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
ARHGEF1-214ENST00000596957 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
ARHGEF1-214ENST00000596957 STYK1Q6J9G0 422 aa18.69■□□□□ 0.58
ARHGEF1-214ENST00000596957 CNKSR1Q969H4 720 aa18.69■□□□□ 0.58
ARHGEF1-214ENST00000596957 KAZALD1Q96I82 304 aa18.69■□□□□ 0.58
ARHGEF1-214ENST00000596957 PIM2Q9P1W9 311 aa18.69■□□□□ 0.58
ARHGEF1-214ENST00000596957 ANKRD18BA2A2Z9 1011 aa18.68■□□□□ 0.58
ARHGEF1-214ENST00000596957 CSF1RP07333 972 aa18.68■□□□□ 0.58
ARHGEF1-214ENST00000596957 ITGA6P23229 1130 aa18.68■□□□□ 0.58
ARHGEF1-214ENST00000596957 PELP1Q8IZL8 1130 aaKnown RBP18.68■□□□□ 0.58
ARHGEF1-214ENST00000596957 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
ARHGEF1-214ENST00000596957 CDC5LQ99459 802 aaKnown RBP18.68■□□□□ 0.58
ARHGEF1-214ENST00000596957 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
ARHGEF1-214ENST00000596957 TNRC6CQ9HCJ0 1690 aaKnown RBP18.68■□□□□ 0.58
ARHGEF1-214ENST00000596957 TTLL6Q8N841 843 aa18.67■□□□□ 0.58
ARHGEF1-214ENST00000596957 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
ARHGEF1-214ENST00000596957 TMX4Q9H1E5 349 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF1-214ENST00000596957 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
ARHGEF1-214ENST00000596957 SRGAP3O43295 1099 aa18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 HOXA10P31260 410 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 GRAPQ13588 217 aa18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 RABL6Q3YEC7 729 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 DALRD3Q5D0E6 543 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 ANKRD18AQ8IVF6 992 aa18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 GRAPLQ8TC17 118 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 CRAMP1Q96RY5 1269 aa18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-214ENST00000596957 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF1-214ENST00000596957 IGHMBP2P38935 993 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-214ENST00000596957 PRPF40BQ6NWY9 871 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-214ENST00000596957 BCS1LQ9Y276 419 aa18.65■□□□□ 0.58
ARHGEF1-214ENST00000596957 DDX60Q8IY21 1712 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-214ENST00000596957 KCNA3P22001 575 aa18.64■□□□□ 0.57
ARHGEF1-214ENST00000596957 MPHOSPH8Q99549 860 aa18.64■□□□□ 0.57
ARHGEF1-214ENST00000596957 RTL9Q8NET4 1388 aa18.64■□□□□ 0.57
ARHGEF1-214ENST00000596957 LAMB2P55268 1798 aa18.63■□□□□ 0.57
ARHGEF1-214ENST00000596957 ANKRD31Q8N7Z5 1873 aa18.63■□□□□ 0.57
ARHGEF1-214ENST00000596957 BBOX1O75936 387 aa18.63■□□□□ 0.57
ARHGEF1-214ENST00000596957 RPS8P62241 208 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-214ENST00000596957 CELF1Q92879 486 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-214ENST00000596957 HMMRO75330 724 aa18.62■□□□□ 0.57
ARHGEF1-214ENST00000596957 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
ARHGEF1-214ENST00000596957 AAMPQ13685 434 aa18.62■□□□□ 0.57
ARHGEF1-214ENST00000596957 CEP85Q6P2H3 762 aa18.62■□□□□ 0.57
ARHGEF1-214ENST00000596957 RPAP2Q8IXW5 612 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF1-214ENST00000596957 ZNF594Q96JF6 807 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF1-214ENST00000596957 KIF13BQ9NQT8 1826 aa18.61■□□□□ 0.57
ARHGEF1-214ENST00000596957 MTX1Q13505 466 aa18.61■□□□□ 0.57
ARHGEF1-214ENST00000596957 TMC4Q7Z404 712 aa18.61■□□□□ 0.57
ARHGEF1-214ENST00000596957 CNNM1Q9NRU3 951 aa18.61■□□□□ 0.57
ARHGEF1-214ENST00000596957 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
ARHGEF1-214ENST00000596957 DCAF8L1A6NGE4 600 aa18.6■□□□□ 0.57
ARHGEF1-214ENST00000596957 C21orf2O43822 256 aa18.6■□□□□ 0.57
ARHGEF1-214ENST00000596957 GPR162Q16538 588 aa18.6■□□□□ 0.57
ARHGEF1-214ENST00000596957 LDHAL6AQ6ZMR3 332 aa18.6■□□□□ 0.57
ARHGEF1-214ENST00000596957 SIL1Q9H173 461 aa18.6■□□□□ 0.57
ARHGEF1-214ENST00000596957 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF1-214ENST00000596957 KLHDC4Q8TBB5 520 aa18.59■□□□□ 0.57
ARHGEF1-214ENST00000596957 OS9Q13438 667 aaPredicted RBP18.58■□□□□ 0.56
ARHGEF1-214ENST00000596957 SOGA3Q5TF21 947 aa18.58■□□□□ 0.56
ARHGEF1-214ENST00000596957 BSDC1Q9NW68 430 aaPredicted RBP18.58■□□□□ 0.56
ARHGEF1-214ENST00000596957 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.56
ARHGEF1-214ENST00000596957 CCDC93Q567U6 631 aa18.57■□□□□ 0.56
ARHGEF1-214ENST00000596957 SP8Q8IXZ3 490 aa18.57■□□□□ 0.56
ARHGEF1-214ENST00000596957 SSH3Q8TE77 659 aa18.57■□□□□ 0.56
ARHGEF1-214ENST00000596957 ANKIB1Q9P2G1 1089 aa18.57■□□□□ 0.56
ARHGEF1-214ENST00000596957 PA2G4Q9UQ80 394 aaKnown RBP18.57■□□□□ 0.56
ARHGEF1-214ENST00000596957 SURF6O75683 361 aaKnown RBP18.56■□□□□ 0.56
ARHGEF1-214ENST00000596957 RFX5P48382 616 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF1-214ENST00000596957 PTPN12Q05209 780 aaKnown RBP18.56■□□□□ 0.56
ARHGEF1-214ENST00000596957 G3BP1Q13283 466 aaKnown RBP eCLIP18.56■□□□□ 0.56
ARHGEF1-214ENST00000596957 POLA2Q14181 598 aa18.56■□□□□ 0.56
ARHGEF1-214ENST00000596957 CC2D2BQ6DHV5 1058 aa18.56■□□□□ 0.56
ARHGEF1-214ENST00000596957 SRCAPQ6ZRS2 3230 aa18.56■□□□□ 0.56
ARHGEF1-214ENST00000596957 KIAA1551Q9HCM1 1747 aa18.55■□□□□ 0.56
ARHGEF1-214ENST00000596957 METTL24Q5JXM2 366 aa18.55■□□□□ 0.56
ARHGEF1-214ENST00000596957 OLFM4Q6UX06 510 aa18.55■□□□□ 0.56
ARHGEF1-214ENST00000596957 PUS3Q9BZE2 481 aaKnown RBP18.55■□□□□ 0.56
ARHGEF1-214ENST00000596957 COPRSQ9NQ92 184 aa18.55■□□□□ 0.56
ARHGEF1-214ENST00000596957 NSFL1CQ9UNZ2 370 aaKnown RBP18.55■□□□□ 0.56
ARHGEF1-214ENST00000596957 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
ARHGEF1-214ENST00000596957 EYA2O00167 538 aa18.54■□□□□ 0.56
ARHGEF1-214ENST00000596957 KCNJ4P48050 445 aa18.54■□□□□ 0.56
ARHGEF1-214ENST00000596957 LRRC24Q50LG9 513 aa18.54■□□□□ 0.56
ARHGEF1-214ENST00000596957 DPP8Q6V1X1 898 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms