RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 DPY19L2Q6NUT2 758 aa28.61■■■□□ 2.17
GTF2F1-204ENST00000594965 SP8Q8IXZ3 490 aa28.6■■■□□ 2.17
GTF2F1-204ENST00000594965 CWF19L2Q2TBE0 894 aaKnown RBP28.59■■■□□ 2.17
GTF2F1-204ENST00000594965 CELF1Q92879 486 aaKnown RBP28.59■■■□□ 2.17
GTF2F1-204ENST00000594965 DDNO94850 711 aaPredicted RBP28.58■■■□□ 2.17
GTF2F1-204ENST00000594965 NEURL1BA8MQ27 555 aa28.57■■■□□ 2.16
GTF2F1-204ENST00000594965 VEGFAP15692 232 aaPredicted RBP28.57■■■□□ 2.16
GTF2F1-204ENST00000594965 FKBP5Q13451 457 aaPredicted RBP28.57■■■□□ 2.16
GTF2F1-204ENST00000594965 ZNF541Q9H0D2 1346 aa28.57■■■□□ 2.16
GTF2F1-204ENST00000594965 FZD9O00144 591 aa28.56■■■□□ 2.16
GTF2F1-204ENST00000594965 SCN4AP35499 1836 aa28.56■■■□□ 2.16
GTF2F1-204ENST00000594965 NEXNQ0ZGT2 675 aa28.56■■■□□ 2.16
GTF2F1-204ENST00000594965 RBM46Q8TBY0 533 aaKnown RBP28.56■■■□□ 2.16
GTF2F1-204ENST00000594965 CDHR2Q9BYE9 1310 aa28.56■■■□□ 2.16
GTF2F1-204ENST00000594965 DUOX1Q9NRD9 1551 aa28.55■■■□□ 2.16
GTF2F1-204ENST00000594965 PDE8AO60658 829 aa28.55■■■□□ 2.16
GTF2F1-204ENST00000594965 DNAAF4Q8WXU2 420 aa28.55■■■□□ 2.16
GTF2F1-204ENST00000594965 RTFDC1Q9BY42 306 aaPredicted RBP28.55■■■□□ 2.16
GTF2F1-204ENST00000594965 LTBP1Q14766 1721 aa28.55■■■□□ 2.16
GTF2F1-204ENST00000594965 SLFN5Q08AF3 891 aa28.54■■■□□ 2.16
GTF2F1-204ENST00000594965 C16orf71Q8IYS4 520 aaPredicted RBP28.54■■■□□ 2.16
GTF2F1-204ENST00000594965 E9PSI1 815 aa28.53■■■□□ 2.16
GTF2F1-204ENST00000594965 TMC4Q7Z404 712 aa28.53■■■□□ 2.16
GTF2F1-204ENST00000594965 TMX4Q9H1E5 349 aaPredicted RBP28.53■■■□□ 2.16
GTF2F1-204ENST00000594965 SEC31BQ9NQW1 1179 aa28.53■■■□□ 2.16
GTF2F1-204ENST00000594965 HSP90B1P14625 803 aaKnown RBP28.52■■■□□ 2.16
GTF2F1-204ENST00000594965 HSPA6P17066 643 aa28.52■■■□□ 2.16
GTF2F1-204ENST00000594965 MPNDQ8N594 471 aa28.52■■■□□ 2.16
GTF2F1-204ENST00000594965 CDCA7LQ96GN5 454 aa28.52■■■□□ 2.16
GTF2F1-204ENST00000594965 SPEF2Q9C093 1822 aa28.51■■■□□ 2.15
GTF2F1-204ENST00000594965 H7C1W4 665 aa28.51■■■□□ 2.15
GTF2F1-204ENST00000594965 DIEXFQ68CQ4 756 aaKnown RBP28.51■■■□□ 2.15
GTF2F1-204ENST00000594965 DPP8Q6V1X1 898 aaPredicted RBP28.51■■■□□ 2.15
GTF2F1-204ENST00000594965 JDP2Q8WYK2 163 aa28.51■■■□□ 2.15
GTF2F1-204ENST00000594965 F6X3S4 739 aa28.5■■■□□ 2.15
GTF2F1-204ENST00000594965 RPS8P62241 208 aaKnown RBP28.5■■■□□ 2.15
GTF2F1-204ENST00000594965 GCKRQ14397 625 aa28.5■■■□□ 2.15
GTF2F1-204ENST00000594965 MIER1Q8N108 512 aa28.5■■■□□ 2.15
GTF2F1-204ENST00000594965 LARGE2Q8N3Y3 721 aa28.5■■■□□ 2.15
GTF2F1-204ENST00000594965 L3MBTL3Q96JM7 780 aaPredicted RBP28.5■■■□□ 2.15
GTF2F1-204ENST00000594965 PPIP5K2O43314 1243 aa28.49■■■□□ 2.15
GTF2F1-204ENST00000594965 AOC3Q16853 763 aa28.49■■■□□ 2.15
GTF2F1-204ENST00000594965 SUPT20HQ8NEM7 779 aa28.49■■■□□ 2.15
GTF2F1-204ENST00000594965 LINS1Q8NG48 757 aa28.49■■■□□ 2.15
GTF2F1-204ENST00000594965 CCDC85AQ96PX6 553 aaPredicted RBP28.49■■■□□ 2.15
GTF2F1-204ENST00000594965 VPS33BQ9H267 617 aa28.49■■■□□ 2.15
GTF2F1-204ENST00000594965 CASP7P55210 303 aa28.48■■■□□ 2.15
GTF2F1-204ENST00000594965 CCDC152Q4G0S7 254 aa28.48■■■□□ 2.15
GTF2F1-204ENST00000594965 TRMT2AQ8IZ69 625 aaKnown RBP28.48■■■□□ 2.15
GTF2F1-204ENST00000594965 UBE3BQ7Z3V4 1068 aa28.47■■■□□ 2.15
GTF2F1-204ENST00000594965 CTSWP56202 376 aa28.46■■■□□ 2.15
GTF2F1-204ENST00000594965 FSTL1Q12841 308 aa28.46■■■□□ 2.15
GTF2F1-204ENST00000594965 BEND3Q5T5X7 828 aa28.46■■■□□ 2.15
GTF2F1-204ENST00000594965 TTLL11Q8NHH1 800 aa28.46■■■□□ 2.15
GTF2F1-204ENST00000594965 GPSM2P81274 684 aa28.45■■■□□ 2.14
GTF2F1-204ENST00000594965 EIF6P56537 245 aaKnown RBP28.44■■■□□ 2.14
GTF2F1-204ENST00000594965 KIAA2012Q0VF49 1180 aa28.44■■■□□ 2.14
GTF2F1-204ENST00000594965 NIM1KQ8IY84 436 aa28.44■■■□□ 2.14
GTF2F1-204ENST00000594965 GPC2Q8N158 579 aa28.44■■■□□ 2.14
GTF2F1-204ENST00000594965 MRPL50Q8N5N7 158 aaKnown RBP28.44■■■□□ 2.14
GTF2F1-204ENST00000594965 SMC1BQ8NDV3 1235 aa28.44■■■□□ 2.14
GTF2F1-204ENST00000594965 PLA2G12BQ9BX93 195 aa28.44■■■□□ 2.14
GTF2F1-204ENST00000594965 NSFL1CQ9UNZ2 370 aaKnown RBP28.44■■■□□ 2.14
GTF2F1-204ENST00000594965 GREM2Q9H772 168 aa28.42■■■□□ 2.14
GTF2F1-204ENST00000594965 POLLQ9UGP5 575 aa28.42■■■□□ 2.14
GTF2F1-204ENST00000594965 ADAMTSL1Q8N6G6 1762 aa28.42■■■□□ 2.14
GTF2F1-204ENST00000594965 RTL9Q8NET4 1388 aa28.41■■■□□ 2.14
GTF2F1-204ENST00000594965 IQCA1LA6NCM1 817 aa28.41■■■□□ 2.14
GTF2F1-204ENST00000594965 POTEIP0CG38 1075 aa28.41■■■□□ 2.14
GTF2F1-204ENST00000594965 POTEJP0CG39 1038 aa28.41■■■□□ 2.14
GTF2F1-204ENST00000594965 TAF1DQ9H5J8 278 aaPredicted RBP28.41■■■□□ 2.14
GTF2F1-204ENST00000594965 SSH1Q8WYL5 1049 aa28.4■■■□□ 2.14
GTF2F1-204ENST00000594965 ZNRF3Q9ULT6 936 aa28.4■■■□□ 2.14
GTF2F1-204ENST00000594965 GJA3Q9Y6H8 435 aa28.4■■■□□ 2.14
GTF2F1-204ENST00000594965 ANKRD18AQ8IVF6 992 aa28.39■■■□□ 2.14
GTF2F1-204ENST00000594965 CXCL9Q07325 125 aa28.38■■■□□ 2.13
GTF2F1-204ENST00000594965 TBC1D16Q8TBP0 767 aa28.38■■■□□ 2.13
GTF2F1-204ENST00000594965 PODXL2Q9NZ53 605 aa28.38■■■□□ 2.13
GTF2F1-204ENST00000594965 HACL1Q9UJ83 578 aa28.38■■■□□ 2.13
GTF2F1-204ENST00000594965 CSF1RP07333 972 aa28.37■■■□□ 2.13
GTF2F1-204ENST00000594965 APLP1P51693 650 aa28.37■■■□□ 2.13
GTF2F1-204ENST00000594965 YDJCA8MPS7 323 aa28.36■■■□□ 2.13
GTF2F1-204ENST00000594965 C6orf229H3BNL8 230 aa28.36■■■□□ 2.13
GTF2F1-204ENST00000594965 SCNN1DP51172 638 aa28.36■■■□□ 2.13
GTF2F1-204ENST00000594965 WASHC4Q2M389 1173 aa28.36■■■□□ 2.13
GTF2F1-204ENST00000594965 GPR101Q96P66 508 aaPredicted RBP28.36■■■□□ 2.13
GTF2F1-204ENST00000594965 CDC5LQ99459 802 aaKnown RBP28.36■■■□□ 2.13
GTF2F1-204ENST00000594965 ALDH1L1O75891 902 aa28.35■■■□□ 2.13
GTF2F1-204ENST00000594965 EPHX2P34913 555 aa28.35■■■□□ 2.13
GTF2F1-204ENST00000594965 SLC4A10Q6U841 1118 aa28.35■■■□□ 2.13
GTF2F1-204ENST00000594965 SCN9AQ15858 1988 aa28.35■■■□□ 2.13
GTF2F1-204ENST00000594965 RIMBP2O15034 1052 aa28.34■■■□□ 2.13
GTF2F1-204ENST00000594965 FOXO4P98177 505 aa28.34■■■□□ 2.13
GTF2F1-204ENST00000594965 FAM161AQ3B820 660 aa28.34■■■□□ 2.13
GTF2F1-204ENST00000594965 CHADLQ6NUI6 762 aa28.34■■■□□ 2.13
GTF2F1-204ENST00000594965 BCL2L13Q9BXK5 485 aa28.34■■■□□ 2.13
GTF2F1-204ENST00000594965 ALDH1L2Q3SY69 923 aa28.33■■■□□ 2.13
GTF2F1-204ENST00000594965 SRCIN1Q9C0H9 1055 aa28.33■■■□□ 2.13
GTF2F1-204ENST00000594965 BSDC1Q9NW68 430 aaPredicted RBP28.33■■■□□ 2.13
GTF2F1-204ENST00000594965 ANKIB1Q9P2G1 1089 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms