RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 BBOX1O75936 387 aa11.57□□□□□ -0.56
SMAD4-215ENST00000592911 CELF2O95319 508 aaKnown RBP11.57□□□□□ -0.56
SMAD4-215ENST00000592911 HLFQ16534 295 aa11.57□□□□□ -0.56
SMAD4-215ENST00000592911 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
SMAD4-215ENST00000592911 PHACTR3Q96KR7 559 aa11.57□□□□□ -0.56
SMAD4-215ENST00000592911 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
SMAD4-215ENST00000592911 POLR2AP24928 1970 aaKnown RBP11.56□□□□□ -0.56
SMAD4-215ENST00000592911 SLC10A5Q5PT55 438 aa11.56□□□□□ -0.56
SMAD4-215ENST00000592911 CC2D1BQ5T0F9 858 aaKnown RBP11.56□□□□□ -0.56
SMAD4-215ENST00000592911 DDX60Q8IY21 1712 aaKnown RBP11.56□□□□□ -0.56
SMAD4-215ENST00000592911 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
SMAD4-215ENST00000592911 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
SMAD4-215ENST00000592911 TNRC18O15417 2968 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-215ENST00000592911 LRRC37AA6NMS7 1700 aa11.55□□□□□ -0.56
SMAD4-215ENST00000592911 KIAA2012Q0VF49 1180 aa11.55□□□□□ -0.56
SMAD4-215ENST00000592911 CIAPIN1Q6FI81 312 aa11.55□□□□□ -0.56
SMAD4-215ENST00000592911 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
SMAD4-215ENST00000592911 ZNF34Q8IZ26 560 aa11.55□□□□□ -0.56
SMAD4-215ENST00000592911 DPF2Q92785 391 aa11.55□□□□□ -0.56
SMAD4-215ENST00000592911 CCDC102AQ96A19 550 aa11.55□□□□□ -0.56
SMAD4-215ENST00000592911 LAMB2P55268 1798 aa11.54□□□□□ -0.56
SMAD4-215ENST00000592911 PRAMEF22A3QJZ6 481 aa11.54□□□□□ -0.56
SMAD4-215ENST00000592911 TRAF5O00463 557 aa11.54□□□□□ -0.56
SMAD4-215ENST00000592911 NTSR2O95665 410 aa11.54□□□□□ -0.56
SMAD4-215ENST00000592911 CXCL9Q07325 125 aa11.54□□□□□ -0.56
SMAD4-215ENST00000592911 DGKZQ13574 1117 aa11.54□□□□□ -0.56
SMAD4-215ENST00000592911 SP8Q8IXZ3 490 aa11.54□□□□□ -0.56
SMAD4-215ENST00000592911 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-215ENST00000592911 H7C1D1 291 aa11.53□□□□□ -0.56
SMAD4-215ENST00000592911 AOC2O75106 756 aa11.53□□□□□ -0.56
SMAD4-215ENST00000592911 NEFMP07197 916 aa11.53□□□□□ -0.56
SMAD4-215ENST00000592911 RPS12P25398 132 aaKnown RBP11.53□□□□□ -0.56
SMAD4-215ENST00000592911 PIP4K2AP48426 406 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-215ENST00000592911 HSP90AB3PQ58FF7 597 aa11.53□□□□□ -0.56
SMAD4-215ENST00000592911 PRPF38BQ5VTL8 546 aaKnown RBP11.53□□□□□ -0.56
SMAD4-215ENST00000592911 MCM10Q7L590 875 aa11.53□□□□□ -0.56
SMAD4-215ENST00000592911 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
SMAD4-215ENST00000592911 NECTIN2Q92692 538 aa11.53□□□□□ -0.56
SMAD4-215ENST00000592911 UBN2Q6ZU65 1347 aa11.53□□□□□ -0.56
SMAD4-215ENST00000592911 FAM177BA6PVY3 158 aa11.52□□□□□ -0.57
SMAD4-215ENST00000592911 GMPSP49915 693 aaPredicted RBP11.52□□□□□ -0.57
SMAD4-215ENST00000592911 GRM1Q13255 1194 aa11.52□□□□□ -0.57
SMAD4-215ENST00000592911 PKN2Q16513 984 aaKnown RBP11.52□□□□□ -0.57
SMAD4-215ENST00000592911 AOC3Q16853 763 aa11.52□□□□□ -0.57
SMAD4-215ENST00000592911 SUSD4Q5VX71 490 aa11.52□□□□□ -0.57
SMAD4-215ENST00000592911 DPP8Q6V1X1 898 aaPredicted RBP11.52□□□□□ -0.57
SMAD4-215ENST00000592911 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
SMAD4-215ENST00000592911 BCL2L13Q9BXK5 485 aa11.52□□□□□ -0.57
SMAD4-215ENST00000592911 BABAM1Q9NWV8 329 aa11.52□□□□□ -0.57
SMAD4-215ENST00000592911 ZNF609O15014 1411 aa11.52□□□□□ -0.57
SMAD4-215ENST00000592911 U2AF1L5P0DN76 240 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-215ENST00000592911 HUNKP57058 714 aa11.51□□□□□ -0.57
SMAD4-215ENST00000592911 U2AF1Q01081 240 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMAD4-215ENST00000592911 RGMBQ6NW40 437 aa11.51□□□□□ -0.57
SMAD4-215ENST00000592911 MPNDQ8N594 471 aa11.51□□□□□ -0.57
SMAD4-215ENST00000592911 UTP14AQ9BVJ6 771 aaKnown RBP11.51□□□□□ -0.57
SMAD4-215ENST00000592911 GLIS2Q9BZE0 524 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-215ENST00000592911 PNNQ9H307 717 aaKnown RBP11.51□□□□□ -0.57
SMAD4-215ENST00000592911 ABCC4O15439 1325 aa11.51□□□□□ -0.57
SMAD4-215ENST00000592911 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
SMAD4-215ENST00000592911 FKBP1BP68106 108 aa11.5□□□□□ -0.57
SMAD4-215ENST00000592911 FMR1Q06787 632 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMAD4-215ENST00000592911 NOM1Q5C9Z4 860 aaKnown RBP11.5□□□□□ -0.57
SMAD4-215ENST00000592911 C2orf69Q8N8R5 385 aa11.5□□□□□ -0.57
SMAD4-215ENST00000592911 CNOT7Q9UIV1 285 aaKnown RBP11.5□□□□□ -0.57
SMAD4-215ENST00000592911 PSME4Q14997 1843 aa11.49□□□□□ -0.57
SMAD4-215ENST00000592911 FAM155AB1AL88 458 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-215ENST00000592911 GRAPQ13588 217 aa11.49□□□□□ -0.57
SMAD4-215ENST00000592911 GRAPLQ8TC17 118 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-215ENST00000592911 GCC1Q96CN9 775 aa11.49□□□□□ -0.57
SMAD4-215ENST00000592911 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
SMAD4-215ENST00000592911 GBA2Q9HCG7 927 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-215ENST00000592911 TSKSQ9UJT2 592 aa11.49□□□□□ -0.57
SMAD4-215ENST00000592911 GPTP24298 496 aa11.48□□□□□ -0.57
SMAD4-215ENST00000592911 NUBP1P53384 320 aa11.48□□□□□ -0.57
SMAD4-215ENST00000592911 HIRAP54198 1017 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-215ENST00000592911 TTLL7Q6ZT98 887 aa11.48□□□□□ -0.57
SMAD4-215ENST00000592911 DDX46Q7L014 1031 aaKnown RBP11.48□□□□□ -0.57
SMAD4-215ENST00000592911 CTU1Q7Z7A3 348 aaKnown RBP11.48□□□□□ -0.57
SMAD4-215ENST00000592911 DUOX1Q9NRD9 1551 aa11.48□□□□□ -0.57
SMAD4-215ENST00000592911 PAPPA2Q9BXP8 1791 aa11.47□□□□□ -0.57
SMAD4-215ENST00000592911 SH3TC1Q8TE82 1336 aa11.47□□□□□ -0.57
SMAD4-215ENST00000592911 SLC10A3P09131 477 aa11.47□□□□□ -0.57
SMAD4-215ENST00000592911 KRT26Q7Z3Y9 468 aa11.47□□□□□ -0.57
SMAD4-215ENST00000592911 LRP10Q7Z4F1 713 aa11.47□□□□□ -0.57
SMAD4-215ENST00000592911 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
SMAD4-215ENST00000592911 TRPM4Q8TD43 1214 aa11.47□□□□□ -0.57
SMAD4-215ENST00000592911 DCPSQ96C86 337 aaKnown RBP11.47□□□□□ -0.57
SMAD4-215ENST00000592911 ZBTB3Q9H5J0 574 aa11.47□□□□□ -0.57
SMAD4-215ENST00000592911 RRP7AQ9Y3A4 280 aaKnown RBP11.47□□□□□ -0.57
SMAD4-215ENST00000592911 DCTN1Q14203 1278 aa11.46□□□□□ -0.57
SMAD4-215ENST00000592911 EYA3Q99504 573 aa11.46□□□□□ -0.57
SMAD4-215ENST00000592911 ZNF408Q9H9D4 720 aa11.46□□□□□ -0.57
SMAD4-215ENST00000592911 TAF1P21675 1872 aa11.46□□□□□ -0.58
SMAD4-215ENST00000592911 PITPNM2Q9BZ72 1349 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 YDJCA8MPS7 323 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 RAD17O75943 681 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 HSP90B1P14625 803 aaKnown RBP11.45□□□□□ -0.58
SMAD4-215ENST00000592911 MYL6BP14649 208 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 PPP2R1AP30153 589 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms