RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 ALDH1B1P30837 517 aa24.08■■□□□ 1.45
DDX39A-214ENST00000590556 RRP1P56182 461 aaKnown RBP24.08■■□□□ 1.45
DDX39A-214ENST00000590556 PDE3AQ14432 1141 aa24.08■■□□□ 1.45
DDX39A-214ENST00000590556 DDX46Q7L014 1031 aaKnown RBP24.08■■□□□ 1.45
DDX39A-214ENST00000590556 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.45
DDX39A-214ENST00000590556 UBTFL1P0CB47 393 aaPredicted RBP24.07■■□□□ 1.44
DDX39A-214ENST00000590556 TTLL11Q8NHH1 800 aa24.07■■□□□ 1.44
DDX39A-214ENST00000590556 SUCLG2Q96I99 432 aa24.07■■□□□ 1.44
DDX39A-214ENST00000590556 CCDC85AQ96PX6 553 aaPredicted RBP24.07■■□□□ 1.44
DDX39A-214ENST00000590556 CRAMP1Q96RY5 1269 aa24.07■■□□□ 1.44
DDX39A-214ENST00000590556 MEIS3Q99687 375 aa24.07■■□□□ 1.44
DDX39A-214ENST00000590556 BCS1LQ9Y276 419 aa24.07■■□□□ 1.44
DDX39A-214ENST00000590556 GNAI3P08754 354 aa24.06■■□□□ 1.44
DDX39A-214ENST00000590556 FOXO4P98177 505 aa24.06■■□□□ 1.44
DDX39A-214ENST00000590556 HDAC5Q9UQL6 1122 aa24.06■■□□□ 1.44
DDX39A-214ENST00000590556 GPR162Q16538 588 aa24.05■■□□□ 1.44
DDX39A-214ENST00000590556 EPHA10Q5JZY3 1008 aa24.05■■□□□ 1.44
DDX39A-214ENST00000590556 C20orf194Q5TEA3 1177 aa24.05■■□□□ 1.44
DDX39A-214ENST00000590556 CSF1RP07333 972 aa24.04■■□□□ 1.44
DDX39A-214ENST00000590556 PRPF40BQ6NWY9 871 aaKnown RBP24.04■■□□□ 1.44
DDX39A-214ENST00000590556 KAZALD1Q96I82 304 aa24.04■■□□□ 1.44
DDX39A-214ENST00000590556 COG6Q9Y2V7 657 aa24.04■■□□□ 1.44
DDX39A-214ENST00000590556 CACNA1SQ13698 1873 aa24.04■■□□□ 1.44
DDX39A-214ENST00000590556 MVPQ14764 893 aaKnown RBP24.03■■□□□ 1.44
DDX39A-214ENST00000590556 LMBR1LQ6UX01 489 aa24.03■■□□□ 1.44
DDX39A-214ENST00000590556 BICC1Q9H694 974 aaKnown RBP24.03■■□□□ 1.44
DDX39A-214ENST00000590556 GREM2Q9H772 168 aa24.03■■□□□ 1.44
DDX39A-214ENST00000590556 CHMP3Q9Y3E7 222 aa24.03■■□□□ 1.44
DDX39A-214ENST00000590556 SLX4Q8IY92 1834 aa24.03■■□□□ 1.44
DDX39A-214ENST00000590556 DCAF8L1A6NGE4 600 aa24.02■■□□□ 1.44
DDX39A-214ENST00000590556 GRAPQ13588 217 aa24.02■■□□□ 1.44
DDX39A-214ENST00000590556 GRAPLQ8TC17 118 aaPredicted RBP24.02■■□□□ 1.44
DDX39A-214ENST00000590556 SEC31BQ9NQW1 1179 aa24.02■■□□□ 1.44
DDX39A-214ENST00000590556 SUPT16HQ9Y5B9 1047 aaKnown RBP24.02■■□□□ 1.44
DDX39A-214ENST00000590556 RTL9Q8NET4 1388 aa24.02■■□□□ 1.44
DDX39A-214ENST00000590556 TAF1P21675 1872 aa24.01■■□□□ 1.43
DDX39A-214ENST00000590556 ZBTB7BO15156 539 aaPredicted RBP24.01■■□□□ 1.43
DDX39A-214ENST00000590556 BBOX1O75936 387 aa24.01■■□□□ 1.43
DDX39A-214ENST00000590556 YBX3P16989 372 aaKnown RBP eCLIP24.01■■□□□ 1.43
DDX39A-214ENST00000590556 ZNF219Q9P2Y4 722 aaPredicted RBP24.01■■□□□ 1.43
DDX39A-214ENST00000590556 LRRFIP2Q9Y608 721 aaKnown RBP24.01■■□□□ 1.43
DDX39A-214ENST00000590556 FAM161AQ3B820 660 aa24■■□□□ 1.43
DDX39A-214ENST00000590556 ANKRD44Q8N8A2 993 aa24■■□□□ 1.43
DDX39A-214ENST00000590556 DDX19BQ9UMR2 479 aa24■■□□□ 1.43
DDX39A-214ENST00000590556 ARFGEF1Q9Y6D6 1849 aa23.99■■□□□ 1.43
DDX39A-214ENST00000590556 PPEF1O14829 653 aaPredicted RBP23.99■■□□□ 1.43
DDX39A-214ENST00000590556 GNAI2P04899 355 aa23.99■■□□□ 1.43
DDX39A-214ENST00000590556 ITGA6P23229 1130 aa23.99■■□□□ 1.43
DDX39A-214ENST00000590556 RPS8P62241 208 aaKnown RBP23.99■■□□□ 1.43
DDX39A-214ENST00000590556 RABL6Q3YEC7 729 aaPredicted RBP23.99■■□□□ 1.43
DDX39A-214ENST00000590556 CELF1Q92879 486 aaKnown RBP23.99■■□□□ 1.43
DDX39A-214ENST00000590556 CDC5LQ99459 802 aaKnown RBP23.99■■□□□ 1.43
DDX39A-214ENST00000590556 C21orf2O43822 256 aa23.98■■□□□ 1.43
DDX39A-214ENST00000590556 IFIT5Q13325 482 aaKnown RBP23.98■■□□□ 1.43
DDX39A-214ENST00000590556 ANKRD18BA2A2Z9 1011 aa23.97■■□□□ 1.43
DDX39A-214ENST00000590556 CCDC57Q2TAC2 916 aa23.97■■□□□ 1.43
DDX39A-214ENST00000590556 ANKRD18AQ8IVF6 992 aa23.97■■□□□ 1.43
DDX39A-214ENST00000590556 C7orf43Q8WVR3 580 aa23.97■■□□□ 1.43
DDX39A-214ENST00000590556 CHMP4BQ9H444 224 aaKnown RBP23.97■■□□□ 1.43
DDX39A-214ENST00000590556 GRIN3BO60391 1043 aa23.96■■□□□ 1.43
DDX39A-214ENST00000590556 TMC4Q7Z404 712 aa23.96■■□□□ 1.43
DDX39A-214ENST00000590556 TMX4Q9H1E5 349 aaPredicted RBP23.96■■□□□ 1.43
DDX39A-214ENST00000590556 SOGA3Q5TF21 947 aa23.95■■□□□ 1.42
DDX39A-214ENST00000590556 ATP6V0A2Q9Y487 856 aa23.95■■□□□ 1.42
DDX39A-214ENST00000590556 IGHMBP2P38935 993 aaKnown RBP23.94■■□□□ 1.42
DDX39A-214ENST00000590556 SP8Q8IXZ3 490 aa23.94■■□□□ 1.42
DDX39A-214ENST00000590556 COL4A1P02462 1669 aa23.94■■□□□ 1.42
DDX39A-214ENST00000590556 CCDC93Q567U6 631 aa23.93■■□□□ 1.42
DDX39A-214ENST00000590556 TAF7LQ5H9L4 462 aa23.93■■□□□ 1.42
DDX39A-214ENST00000590556 CC2D2BQ6DHV5 1058 aa23.93■■□□□ 1.42
DDX39A-214ENST00000590556 OLFM4Q6UX06 510 aa23.93■■□□□ 1.42
DDX39A-214ENST00000590556 ARHGAP27Q6ZUM4 889 aa23.93■■□□□ 1.42
DDX39A-214ENST00000590556 C1orf115Q9H7X2 142 aa23.93■■□□□ 1.42
DDX39A-214ENST00000590556 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
DDX39A-214ENST00000590556 SLC51AQ86UW1 340 aa23.91■■□□□ 1.42
DDX39A-214ENST00000590556 ZNF594Q96JF6 807 aaPredicted RBP23.91■■□□□ 1.42
DDX39A-214ENST00000590556 MPHOSPH8Q99549 860 aa23.91■■□□□ 1.42
DDX39A-214ENST00000590556 ZBTB40Q9NUA8 1239 aa23.91■■□□□ 1.42
DDX39A-214ENST00000590556 BSDC1Q9NW68 430 aaPredicted RBP23.91■■□□□ 1.42
DDX39A-214ENST00000590556 SPEF2Q9C093 1822 aa23.91■■□□□ 1.42
DDX39A-214ENST00000590556 RTKN2Q8IZC4 609 aa23.9■■□□□ 1.42
DDX39A-214ENST00000590556 CRBNQ96SW2 442 aa23.9■■□□□ 1.42
DDX39A-214ENST00000590556 SRGAP3O43295 1099 aa23.89■■□□□ 1.41
DDX39A-214ENST00000590556 MTX1Q13505 466 aa23.89■■□□□ 1.41
DDX39A-214ENST00000590556 GRIPAP1Q4V328 841 aa23.89■■□□□ 1.41
DDX39A-214ENST00000590556 LDHAL6AQ6ZMR3 332 aa23.88■■□□□ 1.41
DDX39A-214ENST00000590556 GOLGB1Q14789 3259 aaKnown RBP23.88■■□□□ 1.41
DDX39A-214ENST00000590556 RFX5P48382 616 aaPredicted RBP23.87■■□□□ 1.41
DDX39A-214ENST00000590556 ATP8B2P98198 1209 aa23.87■■□□□ 1.41
DDX39A-214ENST00000590556 MPNDQ8N594 471 aa23.87■■□□□ 1.41
DDX39A-214ENST00000590556 CNNM1Q9NRU3 951 aa23.87■■□□□ 1.41
DDX39A-214ENST00000590556 FER1L6Q2WGJ9 1857 aa23.87■■□□□ 1.41
DDX39A-214ENST00000590556 LRRC37AA6NMS7 1700 aa23.87■■□□□ 1.41
DDX39A-214ENST00000590556 KLHDC4Q8TBB5 520 aa23.86■■□□□ 1.41
DDX39A-214ENST00000590556 MINPP1Q9UNW1 487 aa23.86■■□□□ 1.41
DDX39A-214ENST00000590556 NFKBIEO00221 500 aa23.85■■□□□ 1.41
DDX39A-214ENST00000590556 GPSM2P81274 684 aa23.85■■□□□ 1.41
DDX39A-214ENST00000590556 DPP8Q6V1X1 898 aaPredicted RBP23.85■■□□□ 1.41
DDX39A-214ENST00000590556 TAOK3Q9H2K8 898 aa23.85■■□□□ 1.41
DDX39A-214ENST00000590556 ANKIB1Q9P2G1 1089 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms