RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 APLP1P51693 650 aa12.57□□□□□ -0.4
GGA3-209ENST00000580646 FSTL1Q12841 308 aa12.57□□□□□ -0.4
GGA3-209ENST00000580646 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
GGA3-209ENST00000580646 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
GGA3-209ENST00000580646 PSMD1Q99460 953 aa12.57□□□□□ -0.4
GGA3-209ENST00000580646 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
GGA3-209ENST00000580646 BBOX1O75936 387 aa12.56□□□□□ -0.4
GGA3-209ENST00000580646 DDNO94850 711 aaPredicted RBP12.56□□□□□ -0.4
GGA3-209ENST00000580646 IARSP41252 1262 aaKnown RBP12.56□□□□□ -0.4
GGA3-209ENST00000580646 NEXNQ0ZGT2 675 aa12.56□□□□□ -0.4
GGA3-209ENST00000580646 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
GGA3-209ENST00000580646 TNS4Q8IZW8 715 aa12.56□□□□□ -0.4
GGA3-209ENST00000580646 CCDC191Q8NCU4 936 aa12.56□□□□□ -0.4
GGA3-209ENST00000580646 DNAAF4Q8WXU2 420 aa12.56□□□□□ -0.4
GGA3-209ENST00000580646 FAM89AQ96GI7 184 aa12.56□□□□□ -0.4
GGA3-209ENST00000580646 TMX4Q9H1E5 349 aaPredicted RBP12.56□□□□□ -0.4
GGA3-209ENST00000580646 ABCC4O15439 1325 aa12.56□□□□□ -0.4
GGA3-209ENST00000580646 SNED1Q8TER0 1413 aa12.55□□□□□ -0.4
GGA3-209ENST00000580646 SLC51AQ86UW1 340 aa12.55□□□□□ -0.4
GGA3-209ENST00000580646 SMC1BQ8NDV3 1235 aa12.55□□□□□ -0.4
GGA3-209ENST00000580646 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
GGA3-209ENST00000580646 MYD88Q99836 296 aa12.55□□□□□ -0.4
GGA3-209ENST00000580646 ATP6V0A2Q9Y487 856 aa12.55□□□□□ -0.4
GGA3-209ENST00000580646 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
GGA3-209ENST00000580646 SF3B3Q15393 1217 aaKnown RBP12.54□□□□□ -0.4
GGA3-209ENST00000580646 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
GGA3-209ENST00000580646 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
GGA3-209ENST00000580646 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
GGA3-209ENST00000580646 LINS1Q8NG48 757 aa12.54□□□□□ -0.4
GGA3-209ENST00000580646 JDP2Q8WYK2 163 aa12.54□□□□□ -0.4
GGA3-209ENST00000580646 CACNA1SQ13698 1873 aa12.54□□□□□ -0.4
GGA3-209ENST00000580646 CCDC88AQ3V6T2 1871 aa12.54□□□□□ -0.4
GGA3-209ENST00000580646 FZD9O00144 591 aa12.53□□□□□ -0.4
GGA3-209ENST00000580646 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
GGA3-209ENST00000580646 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
GGA3-209ENST00000580646 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
GGA3-209ENST00000580646 GRAPQ13588 217 aa12.53□□□□□ -0.4
GGA3-209ENST00000580646 ZBTB38Q8NAP3 1195 aaPredicted RBP12.53□□□□□ -0.4
GGA3-209ENST00000580646 GRAPLQ8TC17 118 aaPredicted RBP12.53□□□□□ -0.4
GGA3-209ENST00000580646 BCL2L13Q9BXK5 485 aa12.53□□□□□ -0.4
GGA3-209ENST00000580646 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
GGA3-209ENST00000580646 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
GGA3-209ENST00000580646 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
GGA3-209ENST00000580646 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
GGA3-209ENST00000580646 NEURL1BA8MQ27 555 aa12.52□□□□□ -0.41
GGA3-209ENST00000580646 ALDH1L1O75891 902 aa12.52□□□□□ -0.41
GGA3-209ENST00000580646 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
GGA3-209ENST00000580646 BEND3Q5T5X7 828 aa12.52□□□□□ -0.41
GGA3-209ENST00000580646 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
GGA3-209ENST00000580646 KLRG1Q96E93 195 aa12.52□□□□□ -0.41
GGA3-209ENST00000580646 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
GGA3-209ENST00000580646 NOB1Q9ULX3 412 aaKnown RBP12.52□□□□□ -0.41
GGA3-209ENST00000580646 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
GGA3-209ENST00000580646 IQCA1LA6NCM1 817 aa12.51□□□□□ -0.41
GGA3-209ENST00000580646 BCAR3O75815 825 aa12.51□□□□□ -0.41
GGA3-209ENST00000580646 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
GGA3-209ENST00000580646 EIF6P56537 245 aaKnown RBP12.51□□□□□ -0.41
GGA3-209ENST00000580646 TMC4Q7Z404 712 aa12.51□□□□□ -0.41
GGA3-209ENST00000580646 MPNDQ8N594 471 aa12.51□□□□□ -0.41
GGA3-209ENST00000580646 RTFDC1Q9BY42 306 aaPredicted RBP12.51□□□□□ -0.41
GGA3-209ENST00000580646 VPS33BQ9H267 617 aa12.51□□□□□ -0.41
GGA3-209ENST00000580646 RCAN3Q9UKA8 241 aa12.51□□□□□ -0.41
GGA3-209ENST00000580646 CDHR2Q9BYE9 1310 aa12.51□□□□□ -0.41
GGA3-209ENST00000580646 F6X3S4 739 aa12.5□□□□□ -0.41
GGA3-209ENST00000580646 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
GGA3-209ENST00000580646 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
GGA3-209ENST00000580646 GCKRQ14397 625 aa12.5□□□□□ -0.41
GGA3-209ENST00000580646 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
GGA3-209ENST00000580646 DPP8Q6V1X1 898 aaPredicted RBP12.5□□□□□ -0.41
GGA3-209ENST00000580646 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
GGA3-209ENST00000580646 GPC2Q8N158 579 aa12.5□□□□□ -0.41
GGA3-209ENST00000580646 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
GGA3-209ENST00000580646 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
GGA3-209ENST00000580646 CELF1Q92879 486 aaKnown RBP12.5□□□□□ -0.41
GGA3-209ENST00000580646 SRCIN1Q9C0H9 1055 aa12.5□□□□□ -0.41
GGA3-209ENST00000580646 CCT4P50991 539 aaKnown RBP12.49□□□□□ -0.41
GGA3-209ENST00000580646 AOC3Q16853 763 aa12.49□□□□□ -0.41
GGA3-209ENST00000580646 CWF19L2Q2TBE0 894 aaKnown RBP12.49□□□□□ -0.41
GGA3-209ENST00000580646 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
GGA3-209ENST00000580646 TAF1DQ9H5J8 278 aaPredicted RBP12.49□□□□□ -0.41
GGA3-209ENST00000580646 HACL1Q9UJ83 578 aa12.49□□□□□ -0.41
GGA3-209ENST00000580646 UTYO14607 1347 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 H7C1W4 665 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 PDE8AO60658 829 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 MS4A1P11836 297 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 TRIM27P14373 513 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
GGA3-209ENST00000580646 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
GGA3-209ENST00000580646 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 GJA3Q9Y6H8 435 aa12.48□□□□□ -0.41
GGA3-209ENST00000580646 EPHX2P34913 555 aa12.47□□□□□ -0.41
GGA3-209ENST00000580646 CASP7P55210 303 aa12.47□□□□□ -0.41
GGA3-209ENST00000580646 KIAA2012Q0VF49 1180 aa12.47□□□□□ -0.41
GGA3-209ENST00000580646 CCDC152Q4G0S7 254 aa12.47□□□□□ -0.41
GGA3-209ENST00000580646 SLC4A10Q6U841 1118 aa12.47□□□□□ -0.41
GGA3-209ENST00000580646 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
GGA3-209ENST00000580646 SEC31BQ9NQW1 1179 aa12.47□□□□□ -0.41
GGA3-209ENST00000580646 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms