RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 CHRNA5P30532 468 aa19.68■□□□□ 0.74
SPG7-218ENST00000568205 LMBR1LQ6UX01 489 aa19.68■□□□□ 0.74
SPG7-218ENST00000568205 RPGRQ92834 1020 aaKnown RBP19.68■□□□□ 0.74
SPG7-218ENST00000568205 CCDC85AQ96PX6 553 aaPredicted RBP19.68■□□□□ 0.74
SPG7-218ENST00000568205 DDX60Q8IY21 1712 aaKnown RBP19.68■□□□□ 0.74
SPG7-218ENST00000568205 LAMB2P55268 1798 aa19.67■□□□□ 0.74
SPG7-218ENST00000568205 ANKRD31Q8N7Z5 1873 aa19.67■□□□□ 0.74
SPG7-218ENST00000568205 SRGNP10124 158 aa19.67■□□□□ 0.74
SPG7-218ENST00000568205 NPR1P16066 1061 aa19.67■□□□□ 0.74
SPG7-218ENST00000568205 DPEP1P16444 411 aa19.67■□□□□ 0.74
SPG7-218ENST00000568205 EXOC6Q8TAG9 804 aa19.67■□□□□ 0.74
SPG7-218ENST00000568205 RTL9Q8NET4 1388 aa19.67■□□□□ 0.74
SPG7-218ENST00000568205 A0A0G2JLW4 131 aa19.66■□□□□ 0.74
SPG7-218ENST00000568205 HOXA10P31260 410 aaPredicted RBP19.66■□□□□ 0.74
SPG7-218ENST00000568205 FAM161AQ3B820 660 aa19.66■□□□□ 0.74
SPG7-218ENST00000568205 MASTLQ96GX5 879 aa19.66■□□□□ 0.74
SPG7-218ENST00000568205 GREM2Q9H772 168 aa19.66■□□□□ 0.74
SPG7-218ENST00000568205 CHMP3Q9Y3E7 222 aa19.66■□□□□ 0.74
SPG7-218ENST00000568205 KIF13BQ9NQT8 1826 aa19.65■□□□□ 0.74
SPG7-218ENST00000568205 STYK1Q6J9G0 422 aa19.65■□□□□ 0.74
SPG7-218ENST00000568205 DDX46Q7L014 1031 aaKnown RBP19.65■□□□□ 0.74
SPG7-218ENST00000568205 NLGN2Q8NFZ4 835 aa19.65■□□□□ 0.74
SPG7-218ENST00000568205 RBM17Q96I25 401 aaKnown RBP19.65■□□□□ 0.74
SPG7-218ENST00000568205 NEFLP07196 543 aa19.64■□□□□ 0.73
SPG7-218ENST00000568205 MTX1Q13505 466 aa19.64■□□□□ 0.73
SPG7-218ENST00000568205 AAMPQ13685 434 aa19.64■□□□□ 0.73
SPG7-218ENST00000568205 ZNF622Q969S3 477 aaKnown RBP eCLIP19.64■□□□□ 0.73
SPG7-218ENST00000568205 CRAMP1Q96RY5 1269 aa19.64■□□□□ 0.73
SPG7-218ENST00000568205 SYT17Q9BSW7 474 aa19.64■□□□□ 0.73
SPG7-218ENST00000568205 SEC31BQ9NQW1 1179 aa19.64■□□□□ 0.73
SPG7-218ENST00000568205 KCNA3P22001 575 aa19.63■□□□□ 0.73
SPG7-218ENST00000568205 ITGA6P23229 1130 aa19.63■□□□□ 0.73
SPG7-218ENST00000568205 COL11A2P13942 1736 aaPredicted RBP19.62■□□□□ 0.73
SPG7-218ENST00000568205 IFIT5Q13325 482 aaKnown RBP19.62■□□□□ 0.73
SPG7-218ENST00000568205 CEP85Q6P2H3 762 aa19.62■□□□□ 0.73
SPG7-218ENST00000568205 ANKRD18BA2A2Z9 1011 aa19.61■□□□□ 0.73
SPG7-218ENST00000568205 SRGAP3O43295 1099 aa19.61■□□□□ 0.73
SPG7-218ENST00000568205 ALDH1B1P30837 517 aa19.61■□□□□ 0.73
SPG7-218ENST00000568205 ATP8B2P98198 1209 aa19.61■□□□□ 0.73
SPG7-218ENST00000568205 GRAPQ13588 217 aa19.61■□□□□ 0.73
SPG7-218ENST00000568205 CCDC57Q2TAC2 916 aa19.61■□□□□ 0.73
SPG7-218ENST00000568205 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
SPG7-218ENST00000568205 CNKSR1Q969H4 720 aa19.61■□□□□ 0.73
SPG7-218ENST00000568205 CDC5LQ99459 802 aaKnown RBP19.61■□□□□ 0.73
SPG7-218ENST00000568205 PIM2Q9P1W9 311 aa19.61■□□□□ 0.73
SPG7-218ENST00000568205 KIAA1551Q9HCM1 1747 aa19.6■□□□□ 0.73
SPG7-218ENST00000568205 RPAP2Q8IXW5 612 aaPredicted RBP19.6■□□□□ 0.73
SPG7-218ENST00000568205 CELF1Q92879 486 aaKnown RBP19.6■□□□□ 0.73
SPG7-218ENST00000568205 PNMA6EA0A0J9YXQ4 647 aa19.59■□□□□ 0.73
SPG7-218ENST00000568205 RFX5P48382 616 aaPredicted RBP19.59■□□□□ 0.73
SPG7-218ENST00000568205 TTLL6Q8N841 843 aa19.59■□□□□ 0.73
SPG7-218ENST00000568205 BBOX1O75936 387 aa19.58■□□□□ 0.72
SPG7-218ENST00000568205 RPS8P62241 208 aaKnown RBP19.58■□□□□ 0.72
SPG7-218ENST00000568205 POLA2Q14181 598 aa19.58■□□□□ 0.72
SPG7-218ENST00000568205 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.72
SPG7-218ENST00000568205 TAF7LQ5H9L4 462 aa19.58■□□□□ 0.72
SPG7-218ENST00000568205 PRPF40BQ6NWY9 871 aaKnown RBP19.58■□□□□ 0.72
SPG7-218ENST00000568205 ANKRD18AQ8IVF6 992 aa19.58■□□□□ 0.72
SPG7-218ENST00000568205 SSH3Q8TE77 659 aa19.58■□□□□ 0.72
SPG7-218ENST00000568205 PCDHB15Q9Y5E8 787 aa19.58■□□□□ 0.72
SPG7-218ENST00000568205 PPEF1O14829 653 aaPredicted RBP19.57■□□□□ 0.72
SPG7-218ENST00000568205 IGHMBP2P38935 993 aaKnown RBP19.57■□□□□ 0.72
SPG7-218ENST00000568205 SIRT2Q8IXJ6 389 aa19.57■□□□□ 0.72
SPG7-218ENST00000568205 ZNF594Q96JF6 807 aaPredicted RBP19.57■□□□□ 0.72
SPG7-218ENST00000568205 MYH3P11055 1940 aa19.57■□□□□ 0.72
SPG7-218ENST00000568205 COL4A1P02462 1669 aa19.56■□□□□ 0.72
SPG7-218ENST00000568205 HMMRO75330 724 aa19.56■□□□□ 0.72
SPG7-218ENST00000568205 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
SPG7-218ENST00000568205 TMC4Q7Z404 712 aa19.56■□□□□ 0.72
SPG7-218ENST00000568205 KLHDC4Q8TBB5 520 aa19.56■□□□□ 0.72
SPG7-218ENST00000568205 COPRSQ9NQ92 184 aa19.56■□□□□ 0.72
SPG7-218ENST00000568205 WWC3Q9ULE0 1092 aa19.56■□□□□ 0.72
SPG7-218ENST00000568205 DLEC1Q9Y238 1755 aa19.55■□□□□ 0.72
SPG7-218ENST00000568205 MPHOSPH8Q99549 860 aa19.55■□□□□ 0.72
SPG7-218ENST00000568205 BSDC1Q9NW68 430 aaPredicted RBP19.55■□□□□ 0.72
SPG7-218ENST00000568205 SRCAPQ6ZRS2 3230 aa19.54■□□□□ 0.72
SPG7-218ENST00000568205 LDHAL6AQ6ZMR3 332 aa19.54■□□□□ 0.72
SPG7-218ENST00000568205 PA2G4Q9UQ80 394 aaKnown RBP19.54■□□□□ 0.72
SPG7-218ENST00000568205 BCS1LQ9Y276 419 aa19.54■□□□□ 0.72
SPG7-218ENST00000568205 C7orf43Q8WVR3 580 aa19.53■□□□□ 0.72
SPG7-218ENST00000568205 CNNM1Q9NRU3 951 aa19.53■□□□□ 0.72
SPG7-218ENST00000568205 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
SPG7-218ENST00000568205 ATP6V0A2Q9Y487 856 aa19.53■□□□□ 0.72
SPG7-218ENST00000568205 EYA2O00167 538 aa19.52■□□□□ 0.72
SPG7-218ENST00000568205 SLC51AQ86UW1 340 aa19.52■□□□□ 0.72
SPG7-218ENST00000568205 SP8Q8IXZ3 490 aa19.52■□□□□ 0.72
SPG7-218ENST00000568205 PUS3Q9BZE2 481 aaKnown RBP19.52■□□□□ 0.72
SPG7-218ENST00000568205 SIL1Q9H173 461 aa19.52■□□□□ 0.72
SPG7-218ENST00000568205 FBXO3Q9UK99 471 aa19.52■□□□□ 0.72
SPG7-218ENST00000568205 C21orf2O43822 256 aa19.51■□□□□ 0.71
SPG7-218ENST00000568205 CIAO1O76071 339 aa19.51■□□□□ 0.71
SPG7-218ENST00000568205 LRRC24Q50LG9 513 aa19.51■□□□□ 0.71
SPG7-218ENST00000568205 SURF6O75683 361 aaKnown RBP19.5■□□□□ 0.71
SPG7-218ENST00000568205 CC2D2BQ6DHV5 1058 aa19.5■□□□□ 0.71
SPG7-218ENST00000568205 OLFM4Q6UX06 510 aa19.5■□□□□ 0.71
SPG7-218ENST00000568205 TMX4Q9H1E5 349 aaPredicted RBP19.5■□□□□ 0.71
SPG7-218ENST00000568205 MINPP1Q9UNW1 487 aa19.5■□□□□ 0.71
SPG7-218ENST00000568205 NOP58Q9Y2X3 529 aaKnown RBP19.5■□□□□ 0.71
SPG7-218ENST00000568205 RIPOR2Q9Y4F9 1068 aa19.5■□□□□ 0.71
SPG7-218ENST00000568205 SLX4Q8IY92 1834 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms