RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TIMM10P62072 90 aa11.41□□□□□ -0.58
LINC00838-201ENST00000562956 TTLL11Q8NHH1 800 aa11.41□□□□□ -0.58
LINC00838-201ENST00000562956 EDC3Q96F86 508 aaKnown RBP11.41□□□□□ -0.58
LINC00838-201ENST00000562956 IFIT5Q13325 482 aaKnown RBP11.41□□□□□ -0.58
LINC00838-201ENST00000562956 LSG1Q9H089 658 aaKnown RBP11.41□□□□□ -0.58
LINC00838-201ENST00000562956 NDUFB9Q9Y6M9 179 aa11.41□□□□□ -0.58
LINC00838-201ENST00000562956 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 MCCP23508 829 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 CTSWP56202 376 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 GSE1Q14687 1217 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 NEUROD6Q96NK8 337 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 GREM2Q9H772 168 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 GPR108Q9NPR9 543 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
LINC00838-201ENST00000562956 SUSD4Q5VX71 490 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 FAM227BQ96M60 508 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 RREB1Q92766 1687 aa11.4□□□□□ -0.58
LINC00838-201ENST00000562956 RAD50Q92878 1312 aa11.4□□□□□ -0.59
LINC00838-201ENST00000562956 EPB41L2O43491 1005 aaKnown RBP11.39□□□□□ -0.59
LINC00838-201ENST00000562956 ITGA6P23229 1130 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 HSPA4P34932 840 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 DDIT3P35638 169 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 FSD1Q9BTV5 496 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 FAM177BA6PVY3 158 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 FRAT2O75474 233 aaPredicted RBP11.39□□□□□ -0.59
LINC00838-201ENST00000562956 ANAPC15P60006 121 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 ZNF609O15014 1411 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 A0A1B0GUL7 405 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 PDE8AO60658 829 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 NMIQ13287 307 aaPredicted RBP11.39□□□□□ -0.59
LINC00838-201ENST00000562956 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 HAUS7Q99871 368 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 CEP126Q9P2H0 1117 aa11.39□□□□□ -0.59
LINC00838-201ENST00000562956 AK9Q5TCS8 1911 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 NUP98P52948 1817 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 MYH14Q7Z406 1995 aaKnown RBP11.38□□□□□ -0.59
LINC00838-201ENST00000562956 ANKRD36CQ5JPF3 1778 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 ST18O60284 1047 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 PTH1RQ03431 593 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 SMIM5Q71RC9 77 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 DNAJC2Q99543 621 aaKnown RBP11.38□□□□□ -0.59
LINC00838-201ENST00000562956 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 A0A0D9SFI3 127 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 HIP1O00291 1037 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 HCLS1P14317 486 aaPredicted RBP11.38□□□□□ -0.59
LINC00838-201ENST00000562956 NEK4P51957 841 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 CHMP5Q9NZZ3 219 aa11.38□□□□□ -0.59
LINC00838-201ENST00000562956 ATRNO75882 1429 aa11.37□□□□□ -0.59
LINC00838-201ENST00000562956 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
LINC00838-201ENST00000562956 HSP90AA1P07900 732 aaKnown RBP11.37□□□□□ -0.59
LINC00838-201ENST00000562956 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
LINC00838-201ENST00000562956 NIP7Q9Y221 180 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC00838-201ENST00000562956 RIPOR2Q9Y4F9 1068 aa11.37□□□□□ -0.59
LINC00838-201ENST00000562956 SH3TC1Q8TE82 1336 aa11.37□□□□□ -0.59
LINC00838-201ENST00000562956 ANKRD18BA2A2Z9 1011 aa11.37□□□□□ -0.59
LINC00838-201ENST00000562956 LDHAL6AQ6ZMR3 332 aa11.37□□□□□ -0.59
LINC00838-201ENST00000562956 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
LINC00838-201ENST00000562956 TRPC5Q9UL62 973 aaPredicted RBP11.37□□□□□ -0.59
LINC00838-201ENST00000562956 CHGBP05060 677 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
LINC00838-201ENST00000562956 COL5A3P25940 1745 aaPredicted RBP11.36□□□□□ -0.59
LINC00838-201ENST00000562956 CNTNAP4Q9C0A0 1308 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 NTSR2O95665 410 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 ADORA1P30542 326 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 PARP10Q53GL7 1025 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 RASEFQ8IZ41 740 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 UPF3BQ9BZI7 483 aaKnown RBP11.36□□□□□ -0.59
LINC00838-201ENST00000562956 SNRKQ9NRH2 765 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 SNX14Q9Y5W7 946 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 RIC1Q4ADV7 1423 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 AKAP2Q9Y2D5 859 aa11.36□□□□□ -0.59
LINC00838-201ENST00000562956 METTL24Q5JXM2 366 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 ZNF589Q86UQ0 364 aaPredicted RBP11.35□□□□□ -0.59
LINC00838-201ENST00000562956 XAGE2Q96GT9 111 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 AK7Q96M32 723 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 GOLIM4O00461 696 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 QTRT2Q9H974 415 aaKnown RBP11.35□□□□□ -0.59
LINC00838-201ENST00000562956 CNNM1Q9NRU3 951 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 PAG1Q9NWQ8 432 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 CCNL1Q9UK58 526 aaPredicted RBP11.35□□□□□ -0.59
LINC00838-201ENST00000562956 ZNF652Q9Y2D9 606 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 MED23Q9ULK4 1368 aa11.35□□□□□ -0.59
LINC00838-201ENST00000562956 CLEC4GQ6UXB4 293 aa11.34□□□□□ -0.59
LINC00838-201ENST00000562956 KBTBD3Q8NAB2 608 aa11.34□□□□□ -0.59
LINC00838-201ENST00000562956 NHSQ6T4R5 1651 aa11.34□□□□□ -0.59
LINC00838-201ENST00000562956 BTAF1O14981 1849 aa11.34□□□□□ -0.59
LINC00838-201ENST00000562956 IFIT1P09914 478 aaKnown RBP11.34□□□□□ -0.59
LINC00838-201ENST00000562956 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
LINC00838-201ENST00000562956 PRPF40BQ6NWY9 871 aaKnown RBP11.34□□□□□ -0.59
LINC00838-201ENST00000562956 VGLL2Q8N8G2 317 aa11.34□□□□□ -0.59
LINC00838-201ENST00000562956 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
LINC00838-201ENST00000562956 NECTIN1Q15223 517 aa11.33□□□□□ -0.6
LINC00838-201ENST00000562956 AMIGO3Q86WK7 504 aa11.33□□□□□ -0.6
LINC00838-201ENST00000562956 SEC31BQ9NQW1 1179 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms