RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 WDR90Q96KV7 1748 aa22.82■■□□□ 1.24
CMTM3-204ENST00000562357 PCCAP05165 728 aaPredicted RBP22.81■■□□□ 1.24
CMTM3-204ENST00000562357 EXOSC9Q06265 439 aaKnown RBP22.81■■□□□ 1.24
CMTM3-204ENST00000562357 NIM1KQ8IY84 436 aa22.81■■□□□ 1.24
CMTM3-204ENST00000562357 MPNDQ8N594 471 aa22.81■■□□□ 1.24
CMTM3-204ENST00000562357 VPS33BQ9H267 617 aa22.81■■□□□ 1.24
CMTM3-204ENST00000562357 PPIP5K2O43314 1243 aa22.8■■□□□ 1.24
CMTM3-204ENST00000562357 ZNF541Q9H0D2 1346 aa22.8■■□□□ 1.24
CMTM3-204ENST00000562357 FZD9O00144 591 aa22.79■■□□□ 1.24
CMTM3-204ENST00000562357 FLIIQ13045 1269 aa22.79■■□□□ 1.24
CMTM3-204ENST00000562357 FKBP5Q13451 457 aaPredicted RBP22.79■■□□□ 1.24
CMTM3-204ENST00000562357 LAMB2P55268 1798 aa22.78■■□□□ 1.24
CMTM3-204ENST00000562357 VAMP4O75379 141 aa22.78■■□□□ 1.24
CMTM3-204ENST00000562357 CCDC152Q4G0S7 254 aa22.78■■□□□ 1.24
CMTM3-204ENST00000562357 L3MBTL3Q96JM7 780 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-204ENST00000562357 DDX60Q8IY21 1712 aaKnown RBP22.77■■□□□ 1.24
CMTM3-204ENST00000562357 POTECB2RU33 542 aa22.77■■□□□ 1.24
CMTM3-204ENST00000562357 PDE8AO60658 829 aa22.77■■□□□ 1.24
CMTM3-204ENST00000562357 G2E3Q7L622 706 aa22.77■■□□□ 1.24
CMTM3-204ENST00000562357 GPC2Q8N158 579 aa22.77■■□□□ 1.24
CMTM3-204ENST00000562357 RTFDC1Q9BY42 306 aaPredicted RBP22.77■■□□□ 1.24
CMTM3-204ENST00000562357 AOC3Q16853 763 aa22.76■■□□□ 1.23
CMTM3-204ENST00000562357 HACL1Q9UJ83 578 aa22.76■■□□□ 1.23
CMTM3-204ENST00000562357 GJA3Q9Y6H8 435 aa22.76■■□□□ 1.23
CMTM3-204ENST00000562357 SLC51AQ86UW1 340 aa22.75■■□□□ 1.23
CMTM3-204ENST00000562357 CELF1Q92879 486 aaKnown RBP22.75■■□□□ 1.23
CMTM3-204ENST00000562357 SPINK5Q9NQ38 1064 aaPredicted RBP22.75■■□□□ 1.23
CMTM3-204ENST00000562357 CDHR2Q9BYE9 1310 aa22.75■■□□□ 1.23
CMTM3-204ENST00000562357 IGKV5-2P06315 115 aa22.74■■□□□ 1.23
CMTM3-204ENST00000562357 LMOD1P29536 600 aaPredicted RBP22.74■■□□□ 1.23
CMTM3-204ENST00000562357 RPS8P62241 208 aaKnown RBP22.74■■□□□ 1.23
CMTM3-204ENST00000562357 DNAAF4Q8WXU2 420 aa22.74■■□□□ 1.23
CMTM3-204ENST00000562357 NEURL1BA8MQ27 555 aa22.73■■□□□ 1.23
CMTM3-204ENST00000562357 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
CMTM3-204ENST00000562357 CWF19L2Q2TBE0 894 aaKnown RBP22.73■■□□□ 1.23
CMTM3-204ENST00000562357 JARID2Q92833 1246 aaPredicted RBP22.73■■□□□ 1.23
CMTM3-204ENST00000562357 TAF1DQ9H5J8 278 aaPredicted RBP22.73■■□□□ 1.23
CMTM3-204ENST00000562357 NSFL1CQ9UNZ2 370 aaKnown RBP22.73■■□□□ 1.23
CMTM3-204ENST00000562357 CHADLQ6NUI6 762 aa22.72■■□□□ 1.23
CMTM3-204ENST00000562357 ZNRF3Q9ULT6 936 aa22.72■■□□□ 1.23
CMTM3-204ENST00000562357 EPHX2P34913 555 aa22.71■■□□□ 1.23
CMTM3-204ENST00000562357 CTSWP56202 376 aa22.71■■□□□ 1.23
CMTM3-204ENST00000562357 KIAA2012Q0VF49 1180 aa22.71■■□□□ 1.23
CMTM3-204ENST00000562357 EAPPQ56P03 285 aaPredicted RBP22.71■■□□□ 1.23
CMTM3-204ENST00000562357 PNMA8AQ86V59 439 aaPredicted RBP22.71■■□□□ 1.23
CMTM3-204ENST00000562357 LDHDQ86WU2 507 aa22.71■■□□□ 1.23
CMTM3-204ENST00000562357 LINS1Q8NG48 757 aa22.71■■□□□ 1.23
CMTM3-204ENST00000562357 ZNF521Q96K83 1311 aa22.71■■□□□ 1.23
CMTM3-204ENST00000562357 E9PSI1 815 aa22.7■■□□□ 1.22
CMTM3-204ENST00000562357 C6orf229H3BNL8 230 aa22.7■■□□□ 1.22
CMTM3-204ENST00000562357 UBE3BQ7Z3V4 1068 aa22.7■■□□□ 1.22
CMTM3-204ENST00000562357 CCDC85AQ96PX6 553 aaPredicted RBP22.7■■□□□ 1.22
CMTM3-204ENST00000562357 CDC5LQ99459 802 aaKnown RBP22.7■■□□□ 1.22
CMTM3-204ENST00000562357 EYA3Q99504 573 aa22.7■■□□□ 1.22
CMTM3-204ENST00000562357 SCN4AP35499 1836 aa22.7■■□□□ 1.22
CMTM3-204ENST00000562357 COL4A5P29400 1685 aa22.69■■□□□ 1.22
CMTM3-204ENST00000562357 WASHC4Q2M389 1173 aa22.69■■□□□ 1.22
CMTM3-204ENST00000562357 ANKRD18AQ8IVF6 992 aa22.69■■□□□ 1.22
CMTM3-204ENST00000562357 SEC31BQ9NQW1 1179 aa22.69■■□□□ 1.22
CMTM3-204ENST00000562357 GCKRQ14397 625 aa22.68■■□□□ 1.22
CMTM3-204ENST00000562357 ANKIB1Q9P2G1 1089 aa22.68■■□□□ 1.22
CMTM3-204ENST00000562357 CLEC11AQ9Y240 323 aa22.68■■□□□ 1.22
CMTM3-204ENST00000562357 CACNA1FO60840 1977 aa22.68■■□□□ 1.22
CMTM3-204ENST00000562357 GPSM2P81274 684 aa22.67■■□□□ 1.22
CMTM3-204ENST00000562357 TNIP1Q15025 636 aa22.67■■□□□ 1.22
CMTM3-204ENST00000562357 LRRC37AA6NMS7 1700 aa22.67■■□□□ 1.22
CMTM3-204ENST00000562357 H7C1W4 665 aa22.66■■□□□ 1.22
CMTM3-204ENST00000562357 CIAPIN1Q6FI81 312 aa22.66■■□□□ 1.22
CMTM3-204ENST00000562357 TAF1P21675 1872 aa22.65■■□□□ 1.22
CMTM3-204ENST00000562357 POTEIP0CG38 1075 aa22.65■■□□□ 1.22
CMTM3-204ENST00000562357 POTEJP0CG39 1038 aa22.65■■□□□ 1.22
CMTM3-204ENST00000562357 G3V3G9 751 aa22.64■■□□□ 1.21
CMTM3-204ENST00000562357 CXCL9Q07325 125 aa22.64■■□□□ 1.21
CMTM3-204ENST00000562357 DCAF8Q5TAQ9 597 aa22.64■■□□□ 1.21
CMTM3-204ENST00000562357 TTLL11Q8NHH1 800 aa22.64■■□□□ 1.21
CMTM3-204ENST00000562357 BCL2L13Q9BXK5 485 aa22.64■■□□□ 1.21
CMTM3-204ENST00000562357 ZC3H12CQ9C0D7 883 aaKnown RBP22.64■■□□□ 1.21
CMTM3-204ENST00000562357 PODXL2Q9NZ53 605 aa22.64■■□□□ 1.21
CMTM3-204ENST00000562357 GGA1Q9UJY5 639 aa22.64■■□□□ 1.21
CMTM3-204ENST00000562357 RTL9Q8NET4 1388 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 DUOX1Q9NRD9 1551 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 F6X3S4 739 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 RIMBP2O15034 1052 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 UFL1O94874 794 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 SCNN1DP51172 638 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 TBC1D16Q8TBP0 767 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 GREM2Q9H772 168 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 POLLQ9UGP5 575 aa22.63■■□□□ 1.21
CMTM3-204ENST00000562357 XDHP47989 1333 aa22.62■■□□□ 1.21
CMTM3-204ENST00000562357 RAD17O75943 681 aa22.62■■□□□ 1.21
CMTM3-204ENST00000562357 IGHMBP2P38935 993 aaKnown RBP22.62■■□□□ 1.21
CMTM3-204ENST00000562357 HTRA3P83110 453 aa22.62■■□□□ 1.21
CMTM3-204ENST00000562357 PLA2G12BQ9BX93 195 aa22.62■■□□□ 1.21
CMTM3-204ENST00000562357 CEP350Q5VT06 3117 aa22.62■■□□□ 1.21
CMTM3-204ENST00000562357 SLFN5Q08AF3 891 aa22.61■■□□□ 1.21
CMTM3-204ENST00000562357 SLC4A10Q6U841 1118 aa22.61■■□□□ 1.21
CMTM3-204ENST00000562357 DBNDD1Q9H9R9 158 aa22.61■■□□□ 1.21
CMTM3-204ENST00000562357 EPS15P42566 896 aa22.6■■□□□ 1.21
CMTM3-204ENST00000562357 GMPSP49915 693 aaPredicted RBP22.6■■□□□ 1.21
CMTM3-204ENST00000562357 BEND3Q5T5X7 828 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms