RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 TMC4Q7Z404 712 aa32.41■■■□□ 2.78
CRNDE-206ENST00000559432 HSP90B1P14625 803 aaKnown RBP32.4■■■□□ 2.78
CRNDE-206ENST00000559432 MPNDQ8N594 471 aa32.4■■■□□ 2.78
CRNDE-206ENST00000559432 ZBTB38Q8NAP3 1195 aaPredicted RBP32.4■■■□□ 2.78
CRNDE-206ENST00000559432 DDX60Q8IY21 1712 aaKnown RBP32.4■■■□□ 2.78
CRNDE-206ENST00000559432 SCN4AP35499 1836 aa32.4■■■□□ 2.78
CRNDE-206ENST00000559432 CCDC191Q8NCU4 936 aa32.39■■■□□ 2.78
CRNDE-206ENST00000559432 METTL22Q9BUU2 404 aaPredicted RBP32.39■■■□□ 2.78
CRNDE-206ENST00000559432 GJA3Q9Y6H8 435 aa32.39■■■□□ 2.78
CRNDE-206ENST00000559432 POTEIP0CG38 1075 aa32.38■■■□□ 2.77
CRNDE-206ENST00000559432 POTEJP0CG39 1038 aa32.38■■■□□ 2.77
CRNDE-206ENST00000559432 AOC3Q16853 763 aa32.38■■■□□ 2.77
CRNDE-206ENST00000559432 WDR63Q8IWG1 891 aa32.38■■■□□ 2.77
CRNDE-206ENST00000559432 RTFDC1Q9BY42 306 aaPredicted RBP32.38■■■□□ 2.77
CRNDE-206ENST00000559432 COL4A5P29400 1685 aa32.37■■■□□ 2.77
CRNDE-206ENST00000559432 EAPPQ56P03 285 aaPredicted RBP32.37■■■□□ 2.77
CRNDE-206ENST00000559432 LDHDQ86WU2 507 aa32.37■■■□□ 2.77
CRNDE-206ENST00000559432 FAM9BQ8IZU0 186 aa32.37■■■□□ 2.77
CRNDE-206ENST00000559432 CWC25Q9NXE8 425 aaPredicted RBP32.37■■■□□ 2.77
CRNDE-206ENST00000559432 MAP3K2Q9Y2U5 619 aa32.37■■■□□ 2.77
CRNDE-206ENST00000559432 EPHX2P34913 555 aa32.36■■■□□ 2.77
CRNDE-206ENST00000559432 FANCIQ9NVI1 1328 aa32.35■■■□□ 2.77
CRNDE-206ENST00000559432 KSR2Q6VAB6 950 aa32.35■■■□□ 2.77
CRNDE-206ENST00000559432 PNMA8AQ86V59 439 aaPredicted RBP32.35■■■□□ 2.77
CRNDE-206ENST00000559432 KLRG1Q96E93 195 aa32.35■■■□□ 2.77
CRNDE-206ENST00000559432 PCCAP05165 728 aaPredicted RBP32.34■■■□□ 2.77
CRNDE-206ENST00000559432 LMOD1P29536 600 aaPredicted RBP32.34■■■□□ 2.77
CRNDE-206ENST00000559432 CELF1Q92879 486 aaKnown RBP32.34■■■□□ 2.77
CRNDE-206ENST00000559432 CLEC11AQ9Y240 323 aa32.33■■■□□ 2.77
CRNDE-206ENST00000559432 PI4KAP2A4QPH2 592 aa32.32■■■□□ 2.76
CRNDE-206ENST00000559432 SLC4A2P04920 1241 aa32.32■■■□□ 2.76
CRNDE-206ENST00000559432 NEXNQ0ZGT2 675 aa32.32■■■□□ 2.76
CRNDE-206ENST00000559432 PI4KAP1Q8N8J0 262 aa32.32■■■□□ 2.76
CRNDE-206ENST00000559432 ZNRF3Q9ULT6 936 aa32.31■■■□□ 2.76
CRNDE-206ENST00000559432 KIAA2012Q0VF49 1180 aa32.3■■■□□ 2.76
CRNDE-206ENST00000559432 PDE8AO60658 829 aa32.29■■■□□ 2.76
CRNDE-206ENST00000559432 NSFL1CQ9UNZ2 370 aaKnown RBP32.29■■■□□ 2.76
CRNDE-206ENST00000559432 RPS8P62241 208 aaKnown RBP32.28■■■□□ 2.76
CRNDE-206ENST00000559432 CCDC152Q4G0S7 254 aa32.28■■■□□ 2.76
CRNDE-206ENST00000559432 TAF1P21675 1872 aa32.28■■■□□ 2.76
CRNDE-206ENST00000559432 LRRC37AA6NMS7 1700 aa32.27■■■□□ 2.76
CRNDE-206ENST00000559432 G2E3Q7L622 706 aa32.27■■■□□ 2.76
CRNDE-206ENST00000559432 JARID2Q92833 1246 aaPredicted RBP32.27■■■□□ 2.76
CRNDE-206ENST00000559432 IGKV5-2P06315 115 aa32.25■■■□□ 2.75
CRNDE-206ENST00000559432 SCNN1DP51172 638 aa32.25■■■□□ 2.75
CRNDE-206ENST00000559432 EXOSC9Q06265 439 aaKnown RBP32.25■■■□□ 2.75
CRNDE-206ENST00000559432 MYH16Q9H6N6 1097 aa32.25■■■□□ 2.75
CRNDE-206ENST00000559432 CDHR2Q9BYE9 1310 aa32.25■■■□□ 2.75
CRNDE-206ENST00000559432 CXCL9Q07325 125 aa32.24■■■□□ 2.75
CRNDE-206ENST00000559432 FLIIQ13045 1269 aa32.24■■■□□ 2.75
CRNDE-206ENST00000559432 SEC31BQ9NQW1 1179 aa32.24■■■□□ 2.75
CRNDE-206ENST00000559432 C6orf229H3BNL8 230 aa32.23■■■□□ 2.75
CRNDE-206ENST00000559432 VAMP4O75379 141 aa32.23■■■□□ 2.75
CRNDE-206ENST00000559432 EPS15P42566 896 aa32.23■■■□□ 2.75
CRNDE-206ENST00000559432 CIAPIN1Q6FI81 312 aa32.23■■■□□ 2.75
CRNDE-206ENST00000559432 JMYQ8N9B5 988 aa32.23■■■□□ 2.75
CRNDE-206ENST00000559432 CREBZFQ9NS37 354 aa32.23■■■□□ 2.75
CRNDE-206ENST00000559432 DUOX1Q9NRD9 1551 aa32.23■■■□□ 2.75
CRNDE-206ENST00000559432 GPSM2P81274 684 aa32.22■■■□□ 2.75
CRNDE-206ENST00000559432 FKBP5Q13451 457 aaPredicted RBP32.22■■■□□ 2.75
CRNDE-206ENST00000559432 TNIP1Q15025 636 aa32.22■■■□□ 2.75
CRNDE-206ENST00000559432 WASHC4Q2M389 1173 aa32.22■■■□□ 2.75
CRNDE-206ENST00000559432 CWF19L2Q2TBE0 894 aaKnown RBP32.22■■■□□ 2.75
CRNDE-206ENST00000559432 CCDC85AQ96PX6 553 aaPredicted RBP32.22■■■□□ 2.75
CRNDE-206ENST00000559432 EYA3Q99504 573 aa32.21■■■□□ 2.75
CRNDE-206ENST00000559432 ADAMTSL1Q8N6G6 1762 aa32.21■■■□□ 2.75
CRNDE-206ENST00000559432 PASKQ96RG2 1323 aa32.21■■■□□ 2.75
CRNDE-206ENST00000559432 NEURL1BA8MQ27 555 aa32.2■■■□□ 2.75
CRNDE-206ENST00000559432 RAD17O75943 681 aa32.2■■■□□ 2.75
CRNDE-206ENST00000559432 MAP1SQ66K74 1059 aaPredicted RBP32.2■■■□□ 2.75
CRNDE-206ENST00000559432 USP50Q70EL3 339 aaPredicted RBP32.2■■■□□ 2.75
CRNDE-206ENST00000559432 COL4A1P02462 1669 aa32.2■■■□□ 2.74
CRNDE-206ENST00000559432 ITGBL1O95965 494 aaPredicted RBP32.19■■■□□ 2.74
CRNDE-206ENST00000559432 CTSWP56202 376 aa32.19■■■□□ 2.74
CRNDE-206ENST00000559432 CNTROBQ8N137 903 aa32.19■■■□□ 2.74
CRNDE-206ENST00000559432 SPINK5Q9NQ38 1064 aaPredicted RBP32.19■■■□□ 2.74
CRNDE-206ENST00000559432 GPRC5DQ9NZD1 345 aa32.19■■■□□ 2.74
CRNDE-206ENST00000559432 POLLQ9UGP5 575 aa32.19■■■□□ 2.74
CRNDE-206ENST00000559432 LTBP1Q14766 1721 aa32.19■■■□□ 2.74
CRNDE-206ENST00000559432 RIMBP2O15034 1052 aa32.18■■■□□ 2.74
CRNDE-206ENST00000559432 BCL2L13Q9BXK5 485 aa32.18■■■□□ 2.74
CRNDE-206ENST00000559432 ANKIB1Q9P2G1 1089 aa32.18■■■□□ 2.74
CRNDE-206ENST00000559432 GMPSP49915 693 aaPredicted RBP32.17■■■□□ 2.74
CRNDE-206ENST00000559432 ANKRD18AQ8IVF6 992 aa32.17■■■□□ 2.74
CRNDE-206ENST00000559432 DNAAF4Q8WXU2 420 aa32.17■■■□□ 2.74
CRNDE-206ENST00000559432 ADARB2Q9NS39 739 aaKnown RBP32.17■■■□□ 2.74
CRNDE-206ENST00000559432 TBC1D16Q8TBP0 767 aa32.16■■■□□ 2.74
CRNDE-206ENST00000559432 CDC5LQ99459 802 aaKnown RBP32.16■■■□□ 2.74
CRNDE-206ENST00000559432 YDJCA8MPS7 323 aa32.15■■■□□ 2.74
CRNDE-206ENST00000559432 UBE3BQ7Z3V4 1068 aa32.15■■■□□ 2.74
CRNDE-206ENST00000559432 DBNDD1Q9H9R9 158 aa32.15■■■□□ 2.74
CRNDE-206ENST00000559432 PODXL2Q9NZ53 605 aa32.15■■■□□ 2.74
CRNDE-206ENST00000559432 TMEM88BA6NKF7 163 aa32.14■■■□□ 2.74
CRNDE-206ENST00000559432 ZC3H12CQ9C0D7 883 aaKnown RBP32.14■■■□□ 2.74
CRNDE-206ENST00000559432 H7C1W4 665 aa32.13■■■□□ 2.73
CRNDE-206ENST00000559432 GCKRQ14397 625 aa32.13■■■□□ 2.73
CRNDE-206ENST00000559432 LINS1Q8NG48 757 aa32.13■■■□□ 2.73
CRNDE-206ENST00000559432 TTLL11Q8NHH1 800 aa32.13■■■□□ 2.73
CRNDE-206ENST00000559432 GGA1Q9UJY5 639 aa32.13■■■□□ 2.73
CRNDE-206ENST00000559432 G3V3G9 751 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms