RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
SMAD3-210ENST00000559092 LARGE2Q8N3Y3 721 aa22.56■■□□□ 1.2
SMAD3-210ENST00000559092 TIAM2Q8IVF5 1701 aa22.55■■□□□ 1.2
SMAD3-210ENST00000559092 DPP8Q6V1X1 898 aaPredicted RBP22.55■■□□□ 1.2
SMAD3-210ENST00000559092 MPNDQ8N594 471 aa22.55■■□□□ 1.2
SMAD3-210ENST00000559092 SPINK5Q9NQ38 1064 aaPredicted RBP22.55■■□□□ 1.2
SMAD3-210ENST00000559092 WDR90Q96KV7 1748 aa22.54■■□□□ 1.2
SMAD3-210ENST00000559092 EIF6P56537 245 aaKnown RBP22.54■■□□□ 1.2
SMAD3-210ENST00000559092 G2E3Q7L622 706 aa22.54■■□□□ 1.2
SMAD3-210ENST00000559092 GPC2Q8N158 579 aa22.54■■□□□ 1.2
SMAD3-210ENST00000559092 ZNF541Q9H0D2 1346 aa22.54■■□□□ 1.2
SMAD3-210ENST00000559092 DICER1Q9UPY3 1922 aaKnown RBP22.53■■□□□ 1.2
SMAD3-210ENST00000559092 PDE8AO60658 829 aa22.53■■□□□ 1.2
SMAD3-210ENST00000559092 IGKV5-2P06315 115 aa22.53■■□□□ 1.2
SMAD3-210ENST00000559092 FLIIQ13045 1269 aa22.53■■□□□ 1.2
SMAD3-210ENST00000559092 CACNA1SQ13698 1873 aa22.53■■□□□ 1.2
SMAD3-210ENST00000559092 ZNF521Q96K83 1311 aa22.53■■□□□ 1.2
SMAD3-210ENST00000559092 PPIP5K2O43314 1243 aa22.52■■□□□ 1.2
SMAD3-210ENST00000559092 RPS8P62241 208 aaKnown RBP22.52■■□□□ 1.2
SMAD3-210ENST00000559092 CCDC152Q4G0S7 254 aa22.52■■□□□ 1.2
SMAD3-210ENST00000559092 SLC51AQ86UW1 340 aa22.52■■□□□ 1.2
SMAD3-210ENST00000559092 NIM1KQ8IY84 436 aa22.52■■□□□ 1.2
SMAD3-210ENST00000559092 CELF1Q92879 486 aaKnown RBP22.52■■□□□ 1.2
SMAD3-210ENST00000559092 CDHR2Q9BYE9 1310 aa22.52■■□□□ 1.2
SMAD3-210ENST00000559092 CCDC88AQ3V6T2 1871 aa22.51■■□□□ 1.19
SMAD3-210ENST00000559092 CCER2I3L3R5 266 aa22.51■■□□□ 1.19
SMAD3-210ENST00000559092 NEURL1BA8MQ27 555 aa22.5■■□□□ 1.19
SMAD3-210ENST00000559092 FKBP5Q13451 457 aaPredicted RBP22.5■■□□□ 1.19
SMAD3-210ENST00000559092 TAF1DQ9H5J8 278 aaPredicted RBP22.5■■□□□ 1.19
SMAD3-210ENST00000559092 HACL1Q9UJ83 578 aa22.5■■□□□ 1.19
SMAD3-210ENST00000559092 KIAA2012Q0VF49 1180 aa22.49■■□□□ 1.19
SMAD3-210ENST00000559092 AOC3Q16853 763 aa22.49■■□□□ 1.19
SMAD3-210ENST00000559092 ZNRF3Q9ULT6 936 aa22.49■■□□□ 1.19
SMAD3-210ENST00000559092 DNAAF4Q8WXU2 420 aa22.48■■□□□ 1.19
SMAD3-210ENST00000559092 H7C1W4 665 aa22.47■■□□□ 1.19
SMAD3-210ENST00000559092 CWF19L2Q2TBE0 894 aaKnown RBP22.47■■□□□ 1.19
SMAD3-210ENST00000559092 CHADLQ6NUI6 762 aa22.47■■□□□ 1.19
SMAD3-210ENST00000559092 PNMA8AQ86V59 439 aaPredicted RBP22.47■■□□□ 1.19
SMAD3-210ENST00000559092 LDHDQ86WU2 507 aa22.47■■□□□ 1.19
SMAD3-210ENST00000559092 LINS1Q8NG48 757 aa22.47■■□□□ 1.19
SMAD3-210ENST00000559092 JARID2Q92833 1246 aaPredicted RBP22.47■■□□□ 1.19
SMAD3-210ENST00000559092 GCKRQ14397 625 aa22.46■■□□□ 1.19
SMAD3-210ENST00000559092 DNAJC5GQ8N7S2 189 aa22.46■■□□□ 1.19
SMAD3-210ENST00000559092 SEC31BQ9NQW1 1179 aa22.46■■□□□ 1.19
SMAD3-210ENST00000559092 NSFL1CQ9UNZ2 370 aaKnown RBP22.46■■□□□ 1.19
SMAD3-210ENST00000559092 E9PSI1 815 aa22.45■■□□□ 1.18
SMAD3-210ENST00000559092 EPHX2P34913 555 aa22.45■■□□□ 1.18
SMAD3-210ENST00000559092 CTSWP56202 376 aa22.45■■□□□ 1.18
SMAD3-210ENST00000559092 GJA3Q9Y6H8 435 aa22.45■■□□□ 1.18
SMAD3-210ENST00000559092 COL4A5P29400 1685 aa22.45■■□□□ 1.18
SMAD3-210ENST00000559092 WASHC4Q2M389 1173 aa22.44■■□□□ 1.18
SMAD3-210ENST00000559092 DDX60Q8IY21 1712 aaKnown RBP22.44■■□□□ 1.18
SMAD3-210ENST00000559092 TTLL11Q8NHH1 800 aa22.44■■□□□ 1.18
SMAD3-210ENST00000559092 LAMB2P55268 1798 aa22.43■■□□□ 1.18
SMAD3-210ENST00000559092 LMOD1P29536 600 aaPredicted RBP22.43■■□□□ 1.18
SMAD3-210ENST00000559092 GPSM2P81274 684 aa22.43■■□□□ 1.18
SMAD3-210ENST00000559092 CXCL9Q07325 125 aa22.43■■□□□ 1.18
SMAD3-210ENST00000559092 CDC5LQ99459 802 aaKnown RBP22.43■■□□□ 1.18
SMAD3-210ENST00000559092 EYA3Q99504 573 aa22.43■■□□□ 1.18
SMAD3-210ENST00000559092 PODXL2Q9NZ53 605 aa22.43■■□□□ 1.18
SMAD3-210ENST00000559092 POTEIP0CG38 1075 aa22.42■■□□□ 1.18
SMAD3-210ENST00000559092 POTEJP0CG39 1038 aa22.42■■□□□ 1.18
SMAD3-210ENST00000559092 TNIP1Q15025 636 aa22.42■■□□□ 1.18
SMAD3-210ENST00000559092 UBE3BQ7Z3V4 1068 aa22.42■■□□□ 1.18
SMAD3-210ENST00000559092 ANKRD18AQ8IVF6 992 aa22.42■■□□□ 1.18
SMAD3-210ENST00000559092 PLA2G12BQ9BX93 195 aa22.42■■□□□ 1.18
SMAD3-210ENST00000559092 POLLQ9UGP5 575 aa22.42■■□□□ 1.18
SMAD3-210ENST00000559092 RTL9Q8NET4 1388 aa22.41■■□□□ 1.18
SMAD3-210ENST00000559092 C6orf229H3BNL8 230 aa22.41■■□□□ 1.18
SMAD3-210ENST00000559092 EAPPQ56P03 285 aaPredicted RBP22.41■■□□□ 1.18
SMAD3-210ENST00000559092 SCNN1DP51172 638 aa22.4■■□□□ 1.18
SMAD3-210ENST00000559092 TBC1D16Q8TBP0 767 aa22.4■■□□□ 1.18
SMAD3-210ENST00000559092 CCDC85AQ96PX6 553 aaPredicted RBP22.4■■□□□ 1.18
SMAD3-210ENST00000559092 CASP7P55210 303 aa22.39■■□□□ 1.17
SMAD3-210ENST00000559092 SLFN5Q08AF3 891 aa22.39■■□□□ 1.17
SMAD3-210ENST00000559092 BEND3Q5T5X7 828 aa22.39■■□□□ 1.17
SMAD3-210ENST00000559092 CIAPIN1Q6FI81 312 aa22.39■■□□□ 1.17
SMAD3-210ENST00000559092 BSDC1Q9NW68 430 aaPredicted RBP22.39■■□□□ 1.17
SMAD3-210ENST00000559092 ANKIB1Q9P2G1 1089 aa22.39■■□□□ 1.17
SMAD3-210ENST00000559092 CLEC11AQ9Y240 323 aa22.39■■□□□ 1.17
SMAD3-210ENST00000559092 SCN4AP35499 1836 aa22.38■■□□□ 1.17
SMAD3-210ENST00000559092 F6X3S4 739 aa22.38■■□□□ 1.17
SMAD3-210ENST00000559092 USP50Q70EL3 339 aaPredicted RBP22.38■■□□□ 1.17
SMAD3-210ENST00000559092 ZC3H12CQ9C0D7 883 aaKnown RBP22.38■■□□□ 1.17
SMAD3-210ENST00000559092 GREM2Q9H772 168 aa22.38■■□□□ 1.17
SMAD3-210ENST00000559092 GPRC5DQ9NZD1 345 aa22.38■■□□□ 1.17
SMAD3-210ENST00000559092 GGA1Q9UJY5 639 aa22.38■■□□□ 1.17
SMAD3-210ENST00000559092 CSF1RP07333 972 aa22.37■■□□□ 1.17
SMAD3-210ENST00000559092 EPS15P42566 896 aa22.37■■□□□ 1.17
SMAD3-210ENST00000559092 KLRG1Q96E93 195 aa22.37■■□□□ 1.17
SMAD3-210ENST00000559092 XDHP47989 1333 aa22.36■■□□□ 1.17
SMAD3-210ENST00000559092 YDJCA8MPS7 323 aa22.36■■□□□ 1.17
SMAD3-210ENST00000559092 RAD17O75943 681 aa22.36■■□□□ 1.17
SMAD3-210ENST00000559092 ITGBL1O95965 494 aaPredicted RBP22.36■■□□□ 1.17
SMAD3-210ENST00000559092 HTRA3P83110 453 aa22.36■■□□□ 1.17
SMAD3-210ENST00000559092 DUOX1Q9NRD9 1551 aa22.36■■□□□ 1.17
SMAD3-210ENST00000559092 LRRC37AA6NMS7 1700 aa22.36■■□□□ 1.17
SMAD3-210ENST00000559092 PASKQ96RG2 1323 aa22.35■■□□□ 1.17
SMAD3-210ENST00000559092 RIMBP2O15034 1052 aa22.35■■□□□ 1.17
SMAD3-210ENST00000559092 UFL1O94874 794 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms