RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CWF19L2Q2TBE0 894 aaKnown RBP16.07■□□□□ 0.16
SMAD3-208ENST00000558827 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-208ENST00000558827 MPNDQ8N594 471 aa16.07■□□□□ 0.16
SMAD3-208ENST00000558827 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
SMAD3-208ENST00000558827 SEC31BQ9NQW1 1179 aa16.07■□□□□ 0.16
SMAD3-208ENST00000558827 CWC25Q9NXE8 425 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-208ENST00000558827 DDX60Q8IY21 1712 aaKnown RBP16.07■□□□□ 0.16
SMAD3-208ENST00000558827 COL4A1P02462 1669 aa16.06■□□□□ 0.16
SMAD3-208ENST00000558827 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
SMAD3-208ENST00000558827 EAPPQ56P03 285 aaPredicted RBP16.06■□□□□ 0.16
SMAD3-208ENST00000558827 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
SMAD3-208ENST00000558827 ZBTB38Q8NAP3 1195 aaPredicted RBP16.06■□□□□ 0.16
SMAD3-208ENST00000558827 FZD9O00144 591 aa16.05■□□□□ 0.16
SMAD3-208ENST00000558827 APLP1P51693 650 aa16.05■□□□□ 0.16
SMAD3-208ENST00000558827 EIF6P56537 245 aaKnown RBP16.05■□□□□ 0.16
SMAD3-208ENST00000558827 FSTL1Q12841 308 aa16.05■□□□□ 0.16
SMAD3-208ENST00000558827 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
SMAD3-208ENST00000558827 CCDC191Q8NCU4 936 aa16.05■□□□□ 0.16
SMAD3-208ENST00000558827 GPR101Q96P66 508 aaPredicted RBP16.05■□□□□ 0.16
SMAD3-208ENST00000558827 WDR90Q96KV7 1748 aa16.05■□□□□ 0.16
SMAD3-208ENST00000558827 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
SMAD3-208ENST00000558827 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-208ENST00000558827 FLIIQ13045 1269 aa16.04■□□□□ 0.16
SMAD3-208ENST00000558827 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-208ENST00000558827 NIM1KQ8IY84 436 aa16.04■□□□□ 0.16
SMAD3-208ENST00000558827 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
SMAD3-208ENST00000558827 TAF1DQ9H5J8 278 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-208ENST00000558827 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
SMAD3-208ENST00000558827 CLEC11AQ9Y240 323 aa16.04■□□□□ 0.16
SMAD3-208ENST00000558827 F6X3S4 739 aa16.03■□□□□ 0.16
SMAD3-208ENST00000558827 GPSM2P81274 684 aa16.03■□□□□ 0.16
SMAD3-208ENST00000558827 NEXNQ0ZGT2 675 aa16.03■□□□□ 0.16
SMAD3-208ENST00000558827 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
SMAD3-208ENST00000558827 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.16
SMAD3-208ENST00000558827 C6orf229H3BNL8 230 aa16.02■□□□□ 0.16
SMAD3-208ENST00000558827 PDE8AO60658 829 aa16.02■□□□□ 0.16
SMAD3-208ENST00000558827 RPS8P62241 208 aaKnown RBP16.02■□□□□ 0.16
SMAD3-208ENST00000558827 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
SMAD3-208ENST00000558827 HACL1Q9UJ83 578 aa16.02■□□□□ 0.16
SMAD3-208ENST00000558827 RAD17O75943 681 aa16.01■□□□□ 0.15
SMAD3-208ENST00000558827 EPHX2P34913 555 aa16.01■□□□□ 0.15
SMAD3-208ENST00000558827 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
SMAD3-208ENST00000558827 CHADLQ6NUI6 762 aa16.01■□□□□ 0.15
SMAD3-208ENST00000558827 UBE3BQ7Z3V4 1068 aa16.01■□□□□ 0.15
SMAD3-208ENST00000558827 SUPT20HQ8NEM7 779 aa16.01■□□□□ 0.15
SMAD3-208ENST00000558827 L3MBTL3Q96JM7 780 aaPredicted RBP16.01■□□□□ 0.15
SMAD3-208ENST00000558827 IQCA1LA6NCM1 817 aa16■□□□□ 0.15
SMAD3-208ENST00000558827 EPS15P42566 896 aa16■□□□□ 0.15
SMAD3-208ENST00000558827 CXCL9Q07325 125 aa16■□□□□ 0.15
SMAD3-208ENST00000558827 DOK7Q18PE1 504 aa16■□□□□ 0.15
SMAD3-208ENST00000558827 CCDC152Q4G0S7 254 aa16■□□□□ 0.15
SMAD3-208ENST00000558827 GPC2Q8N158 579 aa16■□□□□ 0.15
SMAD3-208ENST00000558827 DNAAF4Q8WXU2 420 aa16■□□□□ 0.15
SMAD3-208ENST00000558827 RTFDC1Q9BY42 306 aaPredicted RBP16■□□□□ 0.15
SMAD3-208ENST00000558827 POLLQ9UGP5 575 aa16■□□□□ 0.15
SMAD3-208ENST00000558827 DNAJC5GQ8N7S2 189 aa15.99■□□□□ 0.15
SMAD3-208ENST00000558827 CDCA7LQ96GN5 454 aa15.99■□□□□ 0.15
SMAD3-208ENST00000558827 DBNDD1Q9H9R9 158 aa15.99■□□□□ 0.15
SMAD3-208ENST00000558827 ZNRF3Q9ULT6 936 aa15.99■□□□□ 0.15
SMAD3-208ENST00000558827 KIAA2012Q0VF49 1180 aa15.98■□□□□ 0.15
SMAD3-208ENST00000558827 WASHC4Q2M389 1173 aa15.98■□□□□ 0.15
SMAD3-208ENST00000558827 MAP1SQ66K74 1059 aaPredicted RBP15.98■□□□□ 0.15
SMAD3-208ENST00000558827 GREM2Q9H772 168 aa15.98■□□□□ 0.15
SMAD3-208ENST00000558827 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 SHTN1A0MZ66 631 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 WTIPA6NIX2 430 aaPredicted RBP15.97■□□□□ 0.15
SMAD3-208ENST00000558827 YDJCA8MPS7 323 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 H7C1W4 665 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 HSP90B1P14625 803 aaKnown RBP15.97■□□□□ 0.15
SMAD3-208ENST00000558827 LMOD1P29536 600 aaPredicted RBP15.97■□□□□ 0.15
SMAD3-208ENST00000558827 SCNN1DP51172 638 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 CTSWP56202 376 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 GCKRQ14397 625 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 TMC4Q7Z404 712 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 LDHDQ86WU2 507 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 TTLL11Q8NHH1 800 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 KCNQ5Q9NR82 932 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
SMAD3-208ENST00000558827 CDHR2Q9BYE9 1310 aa15.96■□□□□ 0.15
SMAD3-208ENST00000558827 UFL1O94874 794 aa15.96■□□□□ 0.15
SMAD3-208ENST00000558827 GMPSP49915 693 aaPredicted RBP15.96■□□□□ 0.15
SMAD3-208ENST00000558827 CIAPIN1Q6FI81 312 aa15.96■□□□□ 0.15
SMAD3-208ENST00000558827 SLC4A10Q6U841 1118 aa15.96■□□□□ 0.15
SMAD3-208ENST00000558827 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.15
SMAD3-208ENST00000558827 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
SMAD3-208ENST00000558827 SCN4AP35499 1836 aa15.96■□□□□ 0.14
SMAD3-208ENST00000558827 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.14
SMAD3-208ENST00000558827 LTBP1Q14766 1721 aa15.95■□□□□ 0.14
SMAD3-208ENST00000558827 FMR1Q06787 632 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMAD3-208ENST00000558827 BCL2L13Q9BXK5 485 aa15.95■□□□□ 0.14
SMAD3-208ENST00000558827 ZBTB12Q9Y330 459 aaPredicted RBP15.95■□□□□ 0.14
SMAD3-208ENST00000558827 LINS1Q8NG48 757 aa15.94■□□□□ 0.14
SMAD3-208ENST00000558827 VPS33BQ9H267 617 aa15.94■□□□□ 0.14
SMAD3-208ENST00000558827 CHMP3Q9Y3E7 222 aa15.94■□□□□ 0.14
SMAD3-208ENST00000558827 G3V3G9 751 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 ECE2O60344 883 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 CASP7P55210 303 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 SLFN5Q08AF3 891 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 BEND3Q5T5X7 828 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms