RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 MEIS3Q99687 375 aa30.28■■■□□ 2.44
RCCD1-206ENST00000556618 TAF1P21675 1872 aa30.28■■■□□ 2.44
RCCD1-206ENST00000556618 TTLL11Q8NHH1 800 aa30.28■■■□□ 2.44
RCCD1-206ENST00000556618 KAZALD1Q96I82 304 aa30.28■■■□□ 2.44
RCCD1-206ENST00000556618 UBTFL1P0CB47 393 aaPredicted RBP30.27■■■□□ 2.44
RCCD1-206ENST00000556618 FOXO4P98177 505 aa30.27■■■□□ 2.44
RCCD1-206ENST00000556618 EPHA10Q5JZY3 1008 aa30.27■■■□□ 2.44
RCCD1-206ENST00000556618 RBM17Q96I25 401 aaKnown RBP30.27■■■□□ 2.44
RCCD1-206ENST00000556618 WWC3Q9ULE0 1092 aa30.26■■■□□ 2.43
RCCD1-206ENST00000556618 CSF1RP07333 972 aa30.25■■■□□ 2.43
RCCD1-206ENST00000556618 GNAI3P08754 354 aa30.25■■■□□ 2.43
RCCD1-206ENST00000556618 CCDC152Q4G0S7 254 aa30.25■■■□□ 2.43
RCCD1-206ENST00000556618 TTLL6Q8N841 843 aa30.25■■■□□ 2.43
RCCD1-206ENST00000556618 CNKSR1Q969H4 720 aa30.25■■■□□ 2.43
RCCD1-206ENST00000556618 CRAMP1Q96RY5 1269 aa30.25■■■□□ 2.43
RCCD1-206ENST00000556618 COG6Q9Y2V7 657 aa30.25■■■□□ 2.43
RCCD1-206ENST00000556618 SUPT16HQ9Y5B9 1047 aaKnown RBP30.25■■■□□ 2.43
RCCD1-206ENST00000556618 SLX4Q8IY92 1834 aa30.25■■■□□ 2.43
RCCD1-206ENST00000556618 ALDH1B1P30837 517 aa30.24■■■□□ 2.43
RCCD1-206ENST00000556618 MVPQ14764 893 aaKnown RBP30.24■■■□□ 2.43
RCCD1-206ENST00000556618 CCDC85AQ96PX6 553 aaPredicted RBP30.24■■■□□ 2.43
RCCD1-206ENST00000556618 ZBTB7BO15156 539 aaPredicted RBP30.24■■■□□ 2.43
RCCD1-206ENST00000556618 DALRD3Q5D0E6 543 aaKnown RBP30.24■■■□□ 2.43
RCCD1-206ENST00000556618 DDX46Q7L014 1031 aaKnown RBP30.24■■■□□ 2.43
RCCD1-206ENST00000556618 HDAC5Q9UQL6 1122 aa30.23■■■□□ 2.43
RCCD1-206ENST00000556618 LMBR1LQ6UX01 489 aa30.22■■■□□ 2.43
RCCD1-206ENST00000556618 BICC1Q9H694 974 aaKnown RBP30.22■■■□□ 2.43
RCCD1-206ENST00000556618 GREM2Q9H772 168 aa30.21■■■□□ 2.43
RCCD1-206ENST00000556618 ARFGEF1Q9Y6D6 1849 aa30.21■■■□□ 2.43
RCCD1-206ENST00000556618 SEC31BQ9NQW1 1179 aa30.2■■■□□ 2.43
RCCD1-206ENST00000556618 DDX19BQ9UMR2 479 aa30.2■■■□□ 2.43
RCCD1-206ENST00000556618 BCS1LQ9Y276 419 aa30.2■■■□□ 2.43
RCCD1-206ENST00000556618 RTL9Q8NET4 1388 aa30.2■■■□□ 2.42
RCCD1-206ENST00000556618 PRPF40BQ6NWY9 871 aaKnown RBP30.2■■■□□ 2.42
RCCD1-206ENST00000556618 ANKRD44Q8N8A2 993 aa30.2■■■□□ 2.42
RCCD1-206ENST00000556618 LRRFIP2Q9Y608 721 aaKnown RBP30.2■■■□□ 2.42
RCCD1-206ENST00000556618 GRAPQ13588 217 aa30.19■■■□□ 2.42
RCCD1-206ENST00000556618 RABL6Q3YEC7 729 aaPredicted RBP30.19■■■□□ 2.42
RCCD1-206ENST00000556618 GRAPLQ8TC17 118 aaPredicted RBP30.19■■■□□ 2.42
RCCD1-206ENST00000556618 UTRNP46939 3433 aa30.18■■■□□ 2.42
RCCD1-206ENST00000556618 GNAI2P04899 355 aa30.17■■■□□ 2.42
RCCD1-206ENST00000556618 FAM161AQ3B820 660 aa30.17■■■□□ 2.42
RCCD1-206ENST00000556618 PELP1Q8IZL8 1130 aaKnown RBP30.17■■■□□ 2.42
RCCD1-206ENST00000556618 CHMP3Q9Y3E7 222 aa30.17■■■□□ 2.42
RCCD1-206ENST00000556618 COL4A1P02462 1669 aa30.17■■■□□ 2.42
RCCD1-206ENST00000556618 CELF1Q92879 486 aaKnown RBP30.16■■■□□ 2.42
RCCD1-206ENST00000556618 BBOX1O75936 387 aa30.15■■■□□ 2.42
RCCD1-206ENST00000556618 YBX3P16989 372 aaKnown RBP eCLIP30.15■■■□□ 2.42
RCCD1-206ENST00000556618 ITGA6P23229 1130 aa30.15■■■□□ 2.42
RCCD1-206ENST00000556618 GPR162Q16538 588 aa30.15■■■□□ 2.42
RCCD1-206ENST00000556618 RPS8P62241 208 aaKnown RBP30.14■■■□□ 2.42
RCCD1-206ENST00000556618 C7orf43Q8WVR3 580 aa30.14■■■□□ 2.42
RCCD1-206ENST00000556618 IFIT5Q13325 482 aaKnown RBP30.13■■■□□ 2.41
RCCD1-206ENST00000556618 CDC5LQ99459 802 aaKnown RBP30.13■■■□□ 2.41
RCCD1-206ENST00000556618 CHMP4BQ9H444 224 aaKnown RBP30.13■■■□□ 2.41
RCCD1-206ENST00000556618 ZNF219Q9P2Y4 722 aaPredicted RBP30.13■■■□□ 2.41
RCCD1-206ENST00000556618 SPEF2Q9C093 1822 aa30.13■■■□□ 2.41
RCCD1-206ENST00000556618 ANKRD18BA2A2Z9 1011 aa30.12■■■□□ 2.41
RCCD1-206ENST00000556618 PPEF1O14829 653 aaPredicted RBP30.12■■■□□ 2.41
RCCD1-206ENST00000556618 C21orf2O43822 256 aa30.12■■■□□ 2.41
RCCD1-206ENST00000556618 CENPBP07199 599 aaPredicted RBP30.11■■■□□ 2.41
RCCD1-206ENST00000556618 CCDC57Q2TAC2 916 aa30.11■■■□□ 2.41
RCCD1-206ENST00000556618 ANKRD18AQ8IVF6 992 aa30.11■■■□□ 2.41
RCCD1-206ENST00000556618 ZBTB40Q9NUA8 1239 aa30.11■■■□□ 2.41
RCCD1-206ENST00000556618 C1orf115Q9H7X2 142 aa30.11■■■□□ 2.41
RCCD1-206ENST00000556618 TMC4Q7Z404 712 aa30.1■■■□□ 2.41
RCCD1-206ENST00000556618 ATP6V0A2Q9Y487 856 aa30.09■■■□□ 2.41
RCCD1-206ENST00000556618 OLFM4Q6UX06 510 aa30.08■■■□□ 2.41
RCCD1-206ENST00000556618 SP8Q8IXZ3 490 aa30.08■■■□□ 2.41
RCCD1-206ENST00000556618 CRBNQ96SW2 442 aa30.08■■■□□ 2.41
RCCD1-206ENST00000556618 MTX1Q13505 466 aa30.07■■■□□ 2.4
RCCD1-206ENST00000556618 SLC51AQ86UW1 340 aa30.07■■■□□ 2.4
RCCD1-206ENST00000556618 IGHMBP2P38935 993 aaKnown RBP30.07■■■□□ 2.4
RCCD1-206ENST00000556618 SOGA3Q5TF21 947 aa30.07■■■□□ 2.4
RCCD1-206ENST00000556618 ZNF594Q96JF6 807 aaPredicted RBP30.07■■■□□ 2.4
RCCD1-206ENST00000556618 BSDC1Q9NW68 430 aaPredicted RBP30.07■■■□□ 2.4
RCCD1-206ENST00000556618 FER1L6Q2WGJ9 1857 aa30.06■■■□□ 2.4
RCCD1-206ENST00000556618 DCAF8L1A6NGE4 600 aa30.06■■■□□ 2.4
RCCD1-206ENST00000556618 GRIN3BO60391 1043 aa30.06■■■□□ 2.4
RCCD1-206ENST00000556618 LRRC37AA6NMS7 1700 aa30.05■■■□□ 2.4
RCCD1-206ENST00000556618 RFX5P48382 616 aaPredicted RBP30.05■■■□□ 2.4
RCCD1-206ENST00000556618 TAF7LQ5H9L4 462 aa30.05■■■□□ 2.4
RCCD1-206ENST00000556618 CC2D2BQ6DHV5 1058 aa30.05■■■□□ 2.4
RCCD1-206ENST00000556618 CCDC93Q567U6 631 aa30.04■■■□□ 2.4
RCCD1-206ENST00000556618 MPHOSPH8Q99549 860 aa30.04■■■□□ 2.4
RCCD1-206ENST00000556618 TMX4Q9H1E5 349 aaPredicted RBP30.04■■■□□ 2.4
RCCD1-206ENST00000556618 SRGAP3O43295 1099 aa30.03■■■□□ 2.4
RCCD1-206ENST00000556618 ATP8B2P98198 1209 aa30.03■■■□□ 2.4
RCCD1-206ENST00000556618 ARHGAP27Q6ZUM4 889 aa30.03■■■□□ 2.4
RCCD1-206ENST00000556618 PNMA6EA0A0J9YXQ4 647 aa30.02■■■□□ 2.4
RCCD1-206ENST00000556618 RTKN2Q8IZC4 609 aa30.02■■■□□ 2.4
RCCD1-206ENST00000556618 KLHDC4Q8TBB5 520 aa30.02■■■□□ 2.4
RCCD1-206ENST00000556618 SNED1Q8TER0 1413 aa30.02■■■□□ 2.4
RCCD1-206ENST00000556618 PTPN12Q05209 780 aaKnown RBP30.01■■■□□ 2.39
RCCD1-206ENST00000556618 GRIPAP1Q4V328 841 aa30.01■■■□□ 2.39
RCCD1-206ENST00000556618 CEP85Q6P2H3 762 aa30.01■■■□□ 2.39
RCCD1-206ENST00000556618 LDHAL6AQ6ZMR3 332 aa30.01■■■□□ 2.39
RCCD1-206ENST00000556618 MINPP1Q9UNW1 487 aa30■■■□□ 2.39
RCCD1-206ENST00000556618 PUS3Q9BZE2 481 aaKnown RBP29.98■■■□□ 2.39
RCCD1-206ENST00000556618 NFKBIEO00221 500 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms