RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 NLRP3Q96P20 1036 aa21.83■■□□□ 1.09
TUBB3-211ENST00000556536 TNRC6CQ9HCJ0 1690 aaKnown RBP21.82■■□□□ 1.08
TUBB3-211ENST00000556536 HSP90B1P14625 803 aaKnown RBP21.82■■□□□ 1.08
TUBB3-211ENST00000556536 LMBR1LQ6UX01 489 aa21.82■■□□□ 1.08
TUBB3-211ENST00000556536 TTLL11Q8NHH1 800 aa21.82■■□□□ 1.08
TUBB3-211ENST00000556536 CCDC85AQ96PX6 553 aaPredicted RBP21.82■■□□□ 1.08
TUBB3-211ENST00000556536 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
TUBB3-211ENST00000556536 CSF1RP07333 972 aa21.81■■□□□ 1.08
TUBB3-211ENST00000556536 PDE6BP35913 854 aa21.81■■□□□ 1.08
TUBB3-211ENST00000556536 SF3B3Q15393 1217 aaKnown RBP21.81■■□□□ 1.08
TUBB3-211ENST00000556536 RABL6Q3YEC7 729 aaPredicted RBP21.81■■□□□ 1.08
TUBB3-211ENST00000556536 GPBP1L1Q9HC44 474 aaPredicted RBP21.81■■□□□ 1.08
TUBB3-211ENST00000556536 HDAC5Q9UQL6 1122 aa21.81■■□□□ 1.08
TUBB3-211ENST00000556536 CD2APQ9Y5K6 639 aa21.81■■□□□ 1.08
TUBB3-211ENST00000556536 DDX60Q8IY21 1712 aaKnown RBP21.8■■□□□ 1.08
TUBB3-211ENST00000556536 CRY2Q49AN0 593 aa21.8■■□□□ 1.08
TUBB3-211ENST00000556536 CHRNA5P30532 468 aa21.79■■□□□ 1.08
TUBB3-211ENST00000556536 C2CD5Q86YS7 1000 aa21.79■■□□□ 1.08
TUBB3-211ENST00000556536 GREM2Q9H772 168 aa21.79■■□□□ 1.08
TUBB3-211ENST00000556536 ANKRD31Q8N7Z5 1873 aa21.78■■□□□ 1.08
TUBB3-211ENST00000556536 FAM161AQ3B820 660 aa21.78■■□□□ 1.08
TUBB3-211ENST00000556536 CCDC152Q4G0S7 254 aa21.78■■□□□ 1.08
TUBB3-211ENST00000556536 CHMP3Q9Y3E7 222 aa21.78■■□□□ 1.08
TUBB3-211ENST00000556536 LAMB2P55268 1798 aa21.77■■□□□ 1.08
TUBB3-211ENST00000556536 A0A0G2JLW4 131 aa21.77■■□□□ 1.08
TUBB3-211ENST00000556536 NEFLP07196 543 aa21.77■■□□□ 1.08
TUBB3-211ENST00000556536 SRGNP10124 158 aa21.77■■□□□ 1.08
TUBB3-211ENST00000556536 CEP85Q6P2H3 762 aa21.77■■□□□ 1.08
TUBB3-211ENST00000556536 H0YIN7 160 aa21.76■■□□□ 1.07
TUBB3-211ENST00000556536 DPEP1P16444 411 aa21.76■■□□□ 1.07
TUBB3-211ENST00000556536 HSPA6P17066 643 aa21.76■■□□□ 1.07
TUBB3-211ENST00000556536 SEC31BQ9NQW1 1179 aa21.76■■□□□ 1.07
TUBB3-211ENST00000556536 PCDHB15Q9Y5E8 787 aa21.76■■□□□ 1.07
TUBB3-211ENST00000556536 PNMA6EA0A0J9YXQ4 647 aa21.75■■□□□ 1.07
TUBB3-211ENST00000556536 KCNA3P22001 575 aa21.75■■□□□ 1.07
TUBB3-211ENST00000556536 HOXA10P31260 410 aaPredicted RBP21.75■■□□□ 1.07
TUBB3-211ENST00000556536 TGFB2P61812 414 aa21.75■■□□□ 1.07
TUBB3-211ENST00000556536 ATP8B2P98198 1209 aa21.75■■□□□ 1.07
TUBB3-211ENST00000556536 MTX1Q13505 466 aa21.75■■□□□ 1.07
TUBB3-211ENST00000556536 SIRT2Q8IXJ6 389 aa21.75■■□□□ 1.07
TUBB3-211ENST00000556536 RPGRQ92834 1020 aaKnown RBP21.75■■□□□ 1.07
TUBB3-211ENST00000556536 RTL9Q8NET4 1388 aa21.74■■□□□ 1.07
TUBB3-211ENST00000556536 NPR1P16066 1061 aa21.74■■□□□ 1.07
TUBB3-211ENST00000556536 ITGA6P23229 1130 aa21.74■■□□□ 1.07
TUBB3-211ENST00000556536 PDZRN3Q9UPQ7 1066 aa21.74■■□□□ 1.07
TUBB3-211ENST00000556536 SRGAP3O43295 1099 aa21.73■■□□□ 1.07
TUBB3-211ENST00000556536 RFX5P48382 616 aaPredicted RBP21.73■■□□□ 1.07
TUBB3-211ENST00000556536 AAMPQ13685 434 aa21.73■■□□□ 1.07
TUBB3-211ENST00000556536 DDX46Q7L014 1031 aaKnown RBP21.73■■□□□ 1.07
TUBB3-211ENST00000556536 ZNF622Q969S3 477 aaKnown RBP eCLIP21.73■■□□□ 1.07
TUBB3-211ENST00000556536 MASTLQ96GX5 879 aa21.73■■□□□ 1.07
TUBB3-211ENST00000556536 RBM17Q96I25 401 aaKnown RBP21.73■■□□□ 1.07
TUBB3-211ENST00000556536 KIF13BQ9NQT8 1826 aa21.72■■□□□ 1.07
TUBB3-211ENST00000556536 IFIT5Q13325 482 aaKnown RBP21.72■■□□□ 1.07
TUBB3-211ENST00000556536 CCDC57Q2TAC2 916 aa21.72■■□□□ 1.07
TUBB3-211ENST00000556536 STYK1Q6J9G0 422 aa21.72■■□□□ 1.07
TUBB3-211ENST00000556536 RPAP2Q8IXW5 612 aaPredicted RBP21.72■■□□□ 1.07
TUBB3-211ENST00000556536 CELF1Q92879 486 aaKnown RBP21.72■■□□□ 1.07
TUBB3-211ENST00000556536 ZNF594Q96JF6 807 aaPredicted RBP21.72■■□□□ 1.07
TUBB3-211ENST00000556536 COL4A1P02462 1669 aa21.72■■□□□ 1.07
TUBB3-211ENST00000556536 COL11A2P13942 1736 aaPredicted RBP21.72■■□□□ 1.07
TUBB3-211ENST00000556536 ANKRD18BA2A2Z9 1011 aa21.71■■□□□ 1.07
TUBB3-211ENST00000556536 POLA2Q14181 598 aa21.71■■□□□ 1.07
TUBB3-211ENST00000556536 KLHDC4Q8TBB5 520 aa21.71■■□□□ 1.07
TUBB3-211ENST00000556536 CRAMP1Q96RY5 1269 aa21.71■■□□□ 1.07
TUBB3-211ENST00000556536 KIAA1551Q9HCM1 1747 aa21.7■■□□□ 1.06
TUBB3-211ENST00000556536 GRAPQ13588 217 aa21.7■■□□□ 1.06
TUBB3-211ENST00000556536 GRAPLQ8TC17 118 aaPredicted RBP21.7■■□□□ 1.06
TUBB3-211ENST00000556536 SSH3Q8TE77 659 aa21.7■■□□□ 1.06
TUBB3-211ENST00000556536 ZNF526Q8TF50 670 aaPredicted RBP21.7■■□□□ 1.06
TUBB3-211ENST00000556536 SLC51AQ86UW1 340 aa21.69■■□□□ 1.06
TUBB3-211ENST00000556536 WWC3Q9ULE0 1092 aa21.69■■□□□ 1.06
TUBB3-211ENST00000556536 PA2G4Q9UQ80 394 aaKnown RBP21.69■■□□□ 1.06
TUBB3-211ENST00000556536 RPS8P62241 208 aaKnown RBP21.68■■□□□ 1.06
TUBB3-211ENST00000556536 PTPN12Q05209 780 aaKnown RBP21.68■■□□□ 1.06
TUBB3-211ENST00000556536 CDC5LQ99459 802 aaKnown RBP21.68■■□□□ 1.06
TUBB3-211ENST00000556536 ALDH1B1P30837 517 aa21.67■■□□□ 1.06
TUBB3-211ENST00000556536 TAF7LQ5H9L4 462 aa21.67■■□□□ 1.06
TUBB3-211ENST00000556536 ANKRD18AQ8IVF6 992 aa21.67■■□□□ 1.06
TUBB3-211ENST00000556536 CNKSR1Q969H4 720 aa21.67■■□□□ 1.06
TUBB3-211ENST00000556536 PRPF40BQ6NWY9 871 aaKnown RBP21.66■■□□□ 1.06
TUBB3-211ENST00000556536 PUS3Q9BZE2 481 aaKnown RBP21.66■■□□□ 1.06
TUBB3-211ENST00000556536 COPRSQ9NQ92 184 aa21.66■■□□□ 1.06
TUBB3-211ENST00000556536 PIM2Q9P1W9 311 aa21.66■■□□□ 1.06
TUBB3-211ENST00000556536 MYH3P11055 1940 aa21.66■■□□□ 1.06
TUBB3-211ENST00000556536 PPEF1O14829 653 aaPredicted RBP21.65■■□□□ 1.06
TUBB3-211ENST00000556536 BBOX1O75936 387 aa21.65■■□□□ 1.06
TUBB3-211ENST00000556536 IGHMBP2P38935 993 aaKnown RBP21.65■■□□□ 1.06
TUBB3-211ENST00000556536 TTLL6Q8N841 843 aa21.65■■□□□ 1.06
TUBB3-211ENST00000556536 SIL1Q9H173 461 aa21.65■■□□□ 1.06
TUBB3-211ENST00000556536 HMMRO75330 724 aa21.64■■□□□ 1.05
TUBB3-211ENST00000556536 LRRC24Q50LG9 513 aa21.64■■□□□ 1.05
TUBB3-211ENST00000556536 LDHAL6AQ6ZMR3 332 aa21.64■■□□□ 1.05
TUBB3-211ENST00000556536 OLFM4Q6UX06 510 aa21.63■■□□□ 1.05
TUBB3-211ENST00000556536 MPHOSPH8Q99549 860 aa21.63■■□□□ 1.05
TUBB3-211ENST00000556536 BSDC1Q9NW68 430 aaPredicted RBP21.63■■□□□ 1.05
TUBB3-211ENST00000556536 ZNF219Q9P2Y4 722 aaPredicted RBP21.63■■□□□ 1.05
TUBB3-211ENST00000556536 IGHDP01880 384 aa21.62■■□□□ 1.05
TUBB3-211ENST00000556536 HDAC1Q13547 482 aaPredicted RBP21.62■■□□□ 1.05
TUBB3-211ENST00000556536 DALRD3Q5D0E6 543 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms