RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
HNRNPC-225ENST00000556513 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-225ENST00000556513 FLIIQ13045 1269 aa13.2□□□□□ -0.3
HNRNPC-225ENST00000556513 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-225ENST00000556513 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-225ENST00000556513 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-225ENST00000556513 RCAN3Q9UKA8 241 aa13.2□□□□□ -0.3
HNRNPC-225ENST00000556513 SNED1Q8TER0 1413 aa13.19□□□□□ -0.3
HNRNPC-225ENST00000556513 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
HNRNPC-225ENST00000556513 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-225ENST00000556513 CWF19L2Q2TBE0 894 aaKnown RBP13.19□□□□□ -0.3
HNRNPC-225ENST00000556513 ZBTB38Q8NAP3 1195 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-225ENST00000556513 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
HNRNPC-225ENST00000556513 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
HNRNPC-225ENST00000556513 LRRC37AA6NMS7 1700 aa13.18□□□□□ -0.3
HNRNPC-225ENST00000556513 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
HNRNPC-225ENST00000556513 IGKV5-2P06315 115 aa13.18□□□□□ -0.3
HNRNPC-225ENST00000556513 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-225ENST00000556513 NEXNQ0ZGT2 675 aa13.18□□□□□ -0.3
HNRNPC-225ENST00000556513 C16orf71Q8IYS4 520 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-225ENST00000556513 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-225ENST00000556513 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 GRAPQ13588 217 aa13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 CC2D2BQ6DHV5 1058 aa13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 GRAPLQ8TC17 118 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 PSMD1Q99460 953 aa13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 COL4A5P29400 1685 aa13.17□□□□□ -0.3
HNRNPC-225ENST00000556513 BBOX1O75936 387 aa13.16□□□□□ -0.3
HNRNPC-225ENST00000556513 DDNO94850 711 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-225ENST00000556513 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-225ENST00000556513 NEURL1BA8MQ27 555 aa13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 TOMM70O94826 608 aa13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 SF3B3Q15393 1217 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 DNAAF4Q8WXU2 420 aa13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 SCN4AP35499 1836 aa13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 ZNF541Q9H0D2 1346 aa13.15□□□□□ -0.3
HNRNPC-225ENST00000556513 F6X3S4 739 aa13.14□□□□□ -0.31
HNRNPC-225ENST00000556513 PDE8AO60658 829 aa13.14□□□□□ -0.31
HNRNPC-225ENST00000556513 AAMPQ13685 434 aa13.14□□□□□ -0.31
HNRNPC-225ENST00000556513 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
HNRNPC-225ENST00000556513 SP8Q8IXZ3 490 aa13.14□□□□□ -0.31
HNRNPC-225ENST00000556513 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
HNRNPC-225ENST00000556513 POTECB2RU33 542 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 HSP90B1P14625 803 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 VEGFAP15692 232 aaPredicted RBP13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 AOC3Q16853 763 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 UBE3BQ7Z3V4 1068 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 MPNDQ8N594 471 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 SEC31BQ9NQW1 1179 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
HNRNPC-225ENST00000556513 CDHR2Q9BYE9 1310 aa13.12□□□□□ -0.31
HNRNPC-225ENST00000556513 FZD9O00144 591 aa13.12□□□□□ -0.31
HNRNPC-225ENST00000556513 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-225ENST00000556513 GCKRQ14397 625 aa13.12□□□□□ -0.31
HNRNPC-225ENST00000556513 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
HNRNPC-225ENST00000556513 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-225ENST00000556513 H7C1W4 665 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 HSPA6P17066 643 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 CTSWP56202 376 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 NIM1KQ8IY84 436 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 NSFL1CQ9UNZ2 370 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
HNRNPC-225ENST00000556513 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-225ENST00000556513 GPSM2P81274 684 aa13.1□□□□□ -0.31
HNRNPC-225ENST00000556513 TTLL11Q8NHH1 800 aa13.1□□□□□ -0.31
HNRNPC-225ENST00000556513 RTFDC1Q9BY42 306 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-225ENST00000556513 C6orf229H3BNL8 230 aa13.09□□□□□ -0.31
HNRNPC-225ENST00000556513 BRPF1P55201 1214 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-225ENST00000556513 BEND3Q5T5X7 828 aa13.09□□□□□ -0.31
HNRNPC-225ENST00000556513 GPC2Q8N158 579 aa13.09□□□□□ -0.31
HNRNPC-225ENST00000556513 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-225ENST00000556513 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
HNRNPC-225ENST00000556513 GPR101Q96P66 508 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-225ENST00000556513 GREM2Q9H772 168 aa13.09□□□□□ -0.31
HNRNPC-225ENST00000556513 PCNTO95613 3336 aa13.08□□□□□ -0.32
HNRNPC-225ENST00000556513 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
HNRNPC-225ENST00000556513 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
HNRNPC-225ENST00000556513 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
HNRNPC-225ENST00000556513 CASP7P55210 303 aa13.08□□□□□ -0.32
HNRNPC-225ENST00000556513 ANKRD18AQ8IVF6 992 aa13.08□□□□□ -0.32
HNRNPC-225ENST00000556513 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-225ENST00000556513 POLLQ9UGP5 575 aa13.08□□□□□ -0.32
HNRNPC-225ENST00000556513 A0A1B0GUL6 1792 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms