RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 TAF1DQ9H5J8 278 aaPredicted RBP16.21■□□□□ 0.19
SNX6-207ENST00000556303 HACL1Q9UJ83 578 aa16.21■□□□□ 0.19
SNX6-207ENST00000556303 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
SNX6-207ENST00000556303 PCCAP05165 728 aaPredicted RBP16.2■□□□□ 0.18
SNX6-207ENST00000556303 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
SNX6-207ENST00000556303 NIM1KQ8IY84 436 aa16.2■□□□□ 0.18
SNX6-207ENST00000556303 MPNDQ8N594 471 aa16.2■□□□□ 0.18
SNX6-207ENST00000556303 MYD88Q99836 296 aa16.2■□□□□ 0.18
SNX6-207ENST00000556303 CWC25Q9NXE8 425 aaPredicted RBP16.2■□□□□ 0.18
SNX6-207ENST00000556303 LAMB2P55268 1798 aa16.19■□□□□ 0.18
SNX6-207ENST00000556303 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
SNX6-207ENST00000556303 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
SNX6-207ENST00000556303 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
SNX6-207ENST00000556303 NEXNQ0ZGT2 675 aa16.18■□□□□ 0.18
SNX6-207ENST00000556303 KLRG1Q96E93 195 aa16.18■□□□□ 0.18
SNX6-207ENST00000556303 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
SNX6-207ENST00000556303 PI4KAP2A4QPH2 592 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 PDE8AO60658 829 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 EPHX2P34913 555 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 CCDC152Q4G0S7 254 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 PI4KAP1Q8N8J0 262 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 ZNRF3Q9ULT6 936 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 MAP3K2Q9Y2U5 619 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
SNX6-207ENST00000556303 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
SNX6-207ENST00000556303 LMOD1P29536 600 aaPredicted RBP16.16■□□□□ 0.18
SNX6-207ENST00000556303 RPS8P62241 208 aaKnown RBP16.16■□□□□ 0.18
SNX6-207ENST00000556303 AOC3Q16853 763 aa16.16■□□□□ 0.18
SNX6-207ENST00000556303 CDHR2Q9BYE9 1310 aa16.16■□□□□ 0.18
SNX6-207ENST00000556303 VAMP4O75379 141 aa16.15■□□□□ 0.18
SNX6-207ENST00000556303 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
SNX6-207ENST00000556303 JMYQ8N9B5 988 aa16.15■□□□□ 0.18
SNX6-207ENST00000556303 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
SNX6-207ENST00000556303 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
SNX6-207ENST00000556303 IGKV5-2P06315 115 aa16.14■□□□□ 0.17
SNX6-207ENST00000556303 TNIP1Q15025 636 aa16.14■□□□□ 0.17
SNX6-207ENST00000556303 RTL5Q5HYW3 569 aaPredicted RBP16.14■□□□□ 0.17
SNX6-207ENST00000556303 EYA3Q99504 573 aa16.14■□□□□ 0.17
SNX6-207ENST00000556303 CREBZFQ9NS37 354 aa16.14■□□□□ 0.17
SNX6-207ENST00000556303 GJA3Q9Y6H8 435 aa16.14■□□□□ 0.17
SNX6-207ENST00000556303 COL4A5P29400 1685 aa16.14■□□□□ 0.17
SNX6-207ENST00000556303 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
SNX6-207ENST00000556303 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
SNX6-207ENST00000556303 FLIIQ13045 1269 aa16.13■□□□□ 0.17
SNX6-207ENST00000556303 EAPPQ56P03 285 aaPredicted RBP16.13■□□□□ 0.17
SNX6-207ENST00000556303 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
SNX6-207ENST00000556303 PODXL2Q9NZ53 605 aa16.13■□□□□ 0.17
SNX6-207ENST00000556303 NSFL1CQ9UNZ2 370 aaKnown RBP16.13■□□□□ 0.17
SNX6-207ENST00000556303 PASKQ96RG2 1323 aa16.13■□□□□ 0.17
SNX6-207ENST00000556303 LRRC37AA6NMS7 1700 aa16.12■□□□□ 0.17
SNX6-207ENST00000556303 NEURL1BA8MQ27 555 aa16.12■□□□□ 0.17
SNX6-207ENST00000556303 SCNN1DP51172 638 aa16.12■□□□□ 0.17
SNX6-207ENST00000556303 CXCL9Q07325 125 aa16.12■□□□□ 0.17
SNX6-207ENST00000556303 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
SNX6-207ENST00000556303 SLC51AQ86UW1 340 aa16.12■□□□□ 0.17
SNX6-207ENST00000556303 ZNF428Q96B54 188 aa16.12■□□□□ 0.17
SNX6-207ENST00000556303 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
SNX6-207ENST00000556303 SALL2Q9Y467 1007 aaPredicted RBP16.12■□□□□ 0.17
SNX6-207ENST00000556303 ITGBL1O95965 494 aaPredicted RBP16.11■□□□□ 0.17
SNX6-207ENST00000556303 HTRA3P83110 453 aa16.11■□□□□ 0.17
SNX6-207ENST00000556303 EXOSC9Q06265 439 aaKnown RBP16.11■□□□□ 0.17
SNX6-207ENST00000556303 CIAPIN1Q6FI81 312 aa16.11■□□□□ 0.17
SNX6-207ENST00000556303 DNAAF4Q8WXU2 420 aa16.11■□□□□ 0.17
SNX6-207ENST00000556303 TAF1P21675 1872 aa16.11■□□□□ 0.17
SNX6-207ENST00000556303 H7C1W4 665 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 FKBP5Q13451 457 aaPredicted RBP16.1■□□□□ 0.17
SNX6-207ENST00000556303 G2E3Q7L622 706 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 ANKRD18AQ8IVF6 992 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 LINS1Q8NG48 757 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 CDC5LQ99459 802 aaKnown RBP16.1■□□□□ 0.17
SNX6-207ENST00000556303 PLA2G12BQ9BX93 195 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 ADARB2Q9NS39 739 aaKnown RBP16.1■□□□□ 0.17
SNX6-207ENST00000556303 GPRC5DQ9NZD1 345 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 POLLQ9UGP5 575 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 RTL9Q8NET4 1388 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 ADAMTSL1Q8N6G6 1762 aa16.1■□□□□ 0.17
SNX6-207ENST00000556303 C6orf229H3BNL8 230 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 EPS15P42566 896 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 CTSWP56202 376 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 GPSM2P81274 684 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 GCKRQ14397 625 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 TTLL11Q8NHH1 800 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
SNX6-207ENST00000556303 SEC31BQ9NQW1 1179 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 ZNF521Q96K83 1311 aa16.09■□□□□ 0.17
SNX6-207ENST00000556303 TMEM88BA6NKF7 163 aa16.08■□□□□ 0.16
SNX6-207ENST00000556303 CWF19L2Q2TBE0 894 aaKnown RBP16.08■□□□□ 0.16
SNX6-207ENST00000556303 DPF2Q92785 391 aa16.08■□□□□ 0.16
SNX6-207ENST00000556303 ZC3H12CQ9C0D7 883 aaKnown RBP16.08■□□□□ 0.16
SNX6-207ENST00000556303 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.16
SNX6-207ENST00000556303 GGA1Q9UJY5 639 aa16.08■□□□□ 0.16
SNX6-207ENST00000556303 DUOX1Q9NRD9 1551 aa16.08■□□□□ 0.16
SNX6-207ENST00000556303 YDJCA8MPS7 323 aa16.07■□□□□ 0.16
SNX6-207ENST00000556303 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
SNX6-207ENST00000556303 BCL2L13Q9BXK5 485 aa16.07■□□□□ 0.16
SNX6-207ENST00000556303 ANKIB1Q9P2G1 1089 aa16.07■□□□□ 0.16
SNX6-207ENST00000556303 XDHP47989 1333 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms