RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 NIM1KQ8IY84 436 aa8.57□□□□□ -1.04
SLIRP-203ENST00000554074 LARGE2Q8N3Y3 721 aa8.57□□□□□ -1.04
SLIRP-203ENST00000554074 GRAPLQ8TC17 118 aaPredicted RBP8.57□□□□□ -1.04
SLIRP-203ENST00000554074 PPIP5K2O43314 1243 aa8.56□□□□□ -1.04
SLIRP-203ENST00000554074 ITGBL1O95965 494 aaPredicted RBP8.56□□□□□ -1.04
SLIRP-203ENST00000554074 HCLS1P14317 486 aaPredicted RBP8.56□□□□□ -1.04
SLIRP-203ENST00000554074 SF3B3Q15393 1217 aaKnown RBP8.56□□□□□ -1.04
SLIRP-203ENST00000554074 CCDC27Q2M243 656 aa8.56□□□□□ -1.04
SLIRP-203ENST00000554074 CDHR2Q9BYE9 1310 aa8.55□□□□□ -1.04
SLIRP-203ENST00000554074 SPEF2Q9C093 1822 aa8.55□□□□□ -1.04
SLIRP-203ENST00000554074 HSP90B1P14625 803 aaKnown RBP8.55□□□□□ -1.04
SLIRP-203ENST00000554074 LMOD1P29536 600 aaPredicted RBP8.55□□□□□ -1.04
SLIRP-203ENST00000554074 SCNN1DP51172 638 aa8.55□□□□□ -1.04
SLIRP-203ENST00000554074 GOLGA2Q08379 1002 aa8.55□□□□□ -1.04
SLIRP-203ENST00000554074 KIAA2012Q0VF49 1180 aa8.55□□□□□ -1.04
SLIRP-203ENST00000554074 EAPPQ56P03 285 aaPredicted RBP8.55□□□□□ -1.04
SLIRP-203ENST00000554074 DPP8Q6V1X1 898 aaPredicted RBP8.55□□□□□ -1.04
SLIRP-203ENST00000554074 MPNDQ8N594 471 aa8.55□□□□□ -1.04
SLIRP-203ENST00000554074 ZNRF3Q9ULT6 936 aa8.55□□□□□ -1.04
SLIRP-203ENST00000554074 SCN9AQ15858 1988 aa8.55□□□□□ -1.04
SLIRP-203ENST00000554074 CNTNAP1P78357 1384 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 ZNF316A6NFI3 1004 aaPredicted RBP8.54□□□□□ -1.04
SLIRP-203ENST00000554074 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 ATP5J2-PTCD1G3V325 749 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 TCERG1O14776 1098 aaKnown RBP8.54□□□□□ -1.04
SLIRP-203ENST00000554074 AOC3Q16853 763 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 CCDC30Q5VVM6 783 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 USP50Q70EL3 339 aaPredicted RBP8.54□□□□□ -1.04
SLIRP-203ENST00000554074 RIC3Q7Z5B4 369 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 ZBTB38Q8NAP3 1195 aaPredicted RBP8.54□□□□□ -1.04
SLIRP-203ENST00000554074 C8orf58Q8NAV2 365 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 FAM89AQ96GI7 184 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 CLEC11AQ9Y240 323 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 GJA3Q9Y6H8 435 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 THSD7BQ9C0I4 1608 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 IL16Q14005 1332 aa8.54□□□□□ -1.04
SLIRP-203ENST00000554074 COL4A1P02462 1669 aa8.53□□□□□ -1.04
SLIRP-203ENST00000554074 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
SLIRP-203ENST00000554074 DDX58O95786 925 aaKnown RBP8.53□□□□□ -1.04
SLIRP-203ENST00000554074 CXCL9Q07325 125 aa8.53□□□□□ -1.04
SLIRP-203ENST00000554074 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
SLIRP-203ENST00000554074 CNTROBQ8N137 903 aa8.53□□□□□ -1.04
SLIRP-203ENST00000554074 CCDC191Q8NCU4 936 aa8.53□□□□□ -1.04
SLIRP-203ENST00000554074 PHAXQ9H814 394 aaKnown RBP8.53□□□□□ -1.04
SLIRP-203ENST00000554074 ADARB2Q9NS39 739 aaKnown RBP8.53□□□□□ -1.04
SLIRP-203ENST00000554074 GPRC5DQ9NZD1 345 aa8.53□□□□□ -1.04
SLIRP-203ENST00000554074 RASSF10A6NK89 507 aa8.52□□□□□ -1.05
SLIRP-203ENST00000554074 ELL2O00472 640 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-203ENST00000554074 PCCAP05165 728 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-203ENST00000554074 HSPA1AP0DMV8 641 aaKnown RBP8.52□□□□□ -1.05
SLIRP-203ENST00000554074 HSPA1BP0DMV9 641 aaKnown RBP8.52□□□□□ -1.05
SLIRP-203ENST00000554074 EPS15P42566 896 aa8.52□□□□□ -1.05
SLIRP-203ENST00000554074 TNIP1Q15025 636 aa8.52□□□□□ -1.05
SLIRP-203ENST00000554074 MAP1SQ66K74 1059 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-203ENST00000554074 CIAPIN1Q6FI81 312 aa8.52□□□□□ -1.05
SLIRP-203ENST00000554074 WWC1Q8IX03 1113 aa8.52□□□□□ -1.05
SLIRP-203ENST00000554074 CELF1Q92879 486 aaKnown RBP8.52□□□□□ -1.05
SLIRP-203ENST00000554074 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-203ENST00000554074 RNF216Q9NWF9 866 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-203ENST00000554074 PDE8AO60658 829 aa8.51□□□□□ -1.05
SLIRP-203ENST00000554074 RPS8P62241 208 aaKnown RBP8.51□□□□□ -1.05
SLIRP-203ENST00000554074 CCDC184Q52MB2 194 aa8.51□□□□□ -1.05
SLIRP-203ENST00000554074 KSR2Q6VAB6 950 aa8.51□□□□□ -1.05
SLIRP-203ENST00000554074 TSPYL6Q8N831 410 aa8.51□□□□□ -1.05
SLIRP-203ENST00000554074 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
SLIRP-203ENST00000554074 EYA3Q99504 573 aa8.51□□□□□ -1.05
SLIRP-203ENST00000554074 MYD88Q99836 296 aa8.51□□□□□ -1.05
SLIRP-203ENST00000554074 CWC25Q9NXE8 425 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-203ENST00000554074 PODXL2Q9NZ53 605 aa8.51□□□□□ -1.05
SLIRP-203ENST00000554074 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
SLIRP-203ENST00000554074 PGAP2Q9UHJ9 254 aa8.51□□□□□ -1.05
SLIRP-203ENST00000554074 ZNF646O15015 1829 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-203ENST00000554074 A0A1B0GUL6 1792 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 YDJCA8MPS7 323 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 ZNF609O15014 1411 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 GMPSP49915 693 aaPredicted RBP8.5□□□□□ -1.05
SLIRP-203ENST00000554074 WASHC4Q2M389 1173 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 TWISTNBQ3B726 338 aaPredicted RBP8.5□□□□□ -1.05
SLIRP-203ENST00000554074 CCDC152Q4G0S7 254 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 TNS4Q8IZW8 715 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 DPF2Q92785 391 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 MRS2Q9HD23 443 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 NSFL1CQ9UNZ2 370 aaKnown RBP8.5□□□□□ -1.05
SLIRP-203ENST00000554074 MAP3K2Q9Y2U5 619 aa8.5□□□□□ -1.05
SLIRP-203ENST00000554074 RTL9Q8NET4 1388 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 ANP32CO43423 234 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 RAD17O75943 681 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 RPS12P25398 132 aaKnown RBP8.49□□□□□ -1.05
SLIRP-203ENST00000554074 VEGFBP49765 207 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 GPSM2P81274 684 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 NEXNQ0ZGT2 675 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 DEFB115Q30KQ5 88 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 RTL5Q5HYW3 569 aaPredicted RBP8.49□□□□□ -1.05
SLIRP-203ENST00000554074 WDR63Q8IWG1 891 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 TBC1D16Q8TBP0 767 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 TSR2Q969E8 191 aaKnown RBP8.49□□□□□ -1.05
SLIRP-203ENST00000554074 ZNF428Q96B54 188 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 BCL2L13Q9BXK5 485 aa8.49□□□□□ -1.05
SLIRP-203ENST00000554074 POLLQ9UGP5 575 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms