RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 ZBTB38Q8NAP3 1195 aaPredicted RBP26.46■■□□□ 1.83
HIF1A-206ENST00000553999 JDP2Q8WYK2 163 aa26.46■■□□□ 1.83
HIF1A-206ENST00000553999 MYH16Q9H6N6 1097 aa26.46■■□□□ 1.83
HIF1A-206ENST00000553999 FLIIQ13045 1269 aa26.45■■□□□ 1.82
HIF1A-206ENST00000553999 TRIM28Q13263 835 aaKnown RBP26.45■■□□□ 1.82
HIF1A-206ENST00000553999 FKBP5Q13451 457 aaPredicted RBP26.45■■□□□ 1.82
HIF1A-206ENST00000553999 GJA3Q9Y6H8 435 aa26.45■■□□□ 1.82
HIF1A-206ENST00000553999 IGKV5-2P06315 115 aa26.44■■□□□ 1.82
HIF1A-206ENST00000553999 POTEIP0CG38 1075 aa26.44■■□□□ 1.82
HIF1A-206ENST00000553999 POTEJP0CG39 1038 aa26.44■■□□□ 1.82
HIF1A-206ENST00000553999 DPP8Q6V1X1 898 aaPredicted RBP26.44■■□□□ 1.82
HIF1A-206ENST00000553999 CCDC191Q8NCU4 936 aa26.44■■□□□ 1.82
HIF1A-206ENST00000553999 BBOX1O75936 387 aa26.43■■□□□ 1.82
HIF1A-206ENST00000553999 NEXNQ0ZGT2 675 aa26.43■■□□□ 1.82
HIF1A-206ENST00000553999 SEC31BQ9NQW1 1179 aa26.43■■□□□ 1.82
HIF1A-206ENST00000553999 PCCAP05165 728 aaPredicted RBP26.42■■□□□ 1.82
HIF1A-206ENST00000553999 SF3B3Q15393 1217 aaKnown RBP26.42■■□□□ 1.82
HIF1A-206ENST00000553999 SP8Q8IXZ3 490 aa26.42■■□□□ 1.82
HIF1A-206ENST00000553999 NIM1KQ8IY84 436 aa26.42■■□□□ 1.82
HIF1A-206ENST00000553999 MPNDQ8N594 471 aa26.42■■□□□ 1.82
HIF1A-206ENST00000553999 SMC1BQ8NDV3 1235 aa26.42■■□□□ 1.82
HIF1A-206ENST00000553999 FZD9O00144 591 aa26.4■■□□□ 1.82
HIF1A-206ENST00000553999 EIF6P56537 245 aaKnown RBP26.4■■□□□ 1.82
HIF1A-206ENST00000553999 EAPPQ56P03 285 aaPredicted RBP26.4■■□□□ 1.82
HIF1A-206ENST00000553999 NEURL1BA8MQ27 555 aa26.39■■□□□ 1.82
HIF1A-206ENST00000553999 F6X3S4 739 aa26.39■■□□□ 1.82
HIF1A-206ENST00000553999 GPR101Q96P66 508 aaPredicted RBP26.39■■□□□ 1.82
HIF1A-206ENST00000553999 PDE8AO60658 829 aa26.38■■□□□ 1.81
HIF1A-206ENST00000553999 FSTL1Q12841 308 aa26.38■■□□□ 1.81
HIF1A-206ENST00000553999 UBE3BQ7Z3V4 1068 aa26.38■■□□□ 1.81
HIF1A-206ENST00000553999 NSFL1CQ9UNZ2 370 aaKnown RBP26.38■■□□□ 1.81
HIF1A-206ENST00000553999 ZNF521Q96K83 1311 aa26.38■■□□□ 1.81
HIF1A-206ENST00000553999 GRIPAP1Q4V328 841 aa26.37■■□□□ 1.81
HIF1A-206ENST00000553999 DNAAF4Q8WXU2 420 aa26.37■■□□□ 1.81
HIF1A-206ENST00000553999 APLP1P51693 650 aa26.36■■□□□ 1.81
HIF1A-206ENST00000553999 GPSM2P81274 684 aa26.36■■□□□ 1.81
HIF1A-206ENST00000553999 SUPT20HQ8NEM7 779 aa26.36■■□□□ 1.81
HIF1A-206ENST00000553999 DUOX1Q9NRD9 1551 aa26.36■■□□□ 1.81
HIF1A-206ENST00000553999 RIMBP2O15034 1052 aa26.35■■□□□ 1.81
HIF1A-206ENST00000553999 CCDC152Q4G0S7 254 aa26.35■■□□□ 1.81
HIF1A-206ENST00000553999 L3MBTL3Q96JM7 780 aaPredicted RBP26.35■■□□□ 1.81
HIF1A-206ENST00000553999 TAF1DQ9H5J8 278 aaPredicted RBP26.35■■□□□ 1.81
HIF1A-206ENST00000553999 HACL1Q9UJ83 578 aa26.35■■□□□ 1.81
HIF1A-206ENST00000553999 LRRC37AA6NMS7 1700 aa26.34■■□□□ 1.81
HIF1A-206ENST00000553999 IQCA1LA6NCM1 817 aa26.34■■□□□ 1.81
HIF1A-206ENST00000553999 C6orf229H3BNL8 230 aa26.34■■□□□ 1.81
HIF1A-206ENST00000553999 RPS8P62241 208 aaKnown RBP26.34■■□□□ 1.81
HIF1A-206ENST00000553999 CTSWP56202 376 aa26.33■■□□□ 1.81
HIF1A-206ENST00000553999 GPC2Q8N158 579 aa26.33■■□□□ 1.81
HIF1A-206ENST00000553999 CDCA7LQ96GN5 454 aa26.33■■□□□ 1.81
HIF1A-206ENST00000553999 RTFDC1Q9BY42 306 aaPredicted RBP26.33■■□□□ 1.81
HIF1A-206ENST00000553999 CLEC11AQ9Y240 323 aa26.33■■□□□ 1.81
HIF1A-206ENST00000553999 CDHR2Q9BYE9 1310 aa26.33■■□□□ 1.81
HIF1A-206ENST00000553999 HSP90B1P14625 803 aaKnown RBP26.32■■□□□ 1.8
HIF1A-206ENST00000553999 EPHX2P34913 555 aa26.32■■□□□ 1.8
HIF1A-206ENST00000553999 TMC4Q7Z404 712 aa26.32■■□□□ 1.8
HIF1A-206ENST00000553999 RAD17O75943 681 aa26.31■■□□□ 1.8
HIF1A-206ENST00000553999 KIAA2012Q0VF49 1180 aa26.31■■□□□ 1.8
HIF1A-206ENST00000553999 GCKRQ14397 625 aa26.31■■□□□ 1.8
HIF1A-206ENST00000553999 CHADLQ6NUI6 762 aa26.31■■□□□ 1.8
HIF1A-206ENST00000553999 GREM2Q9H772 168 aa26.31■■□□□ 1.8
HIF1A-206ENST00000553999 BCL2L13Q9BXK5 485 aa26.3■■□□□ 1.8
HIF1A-206ENST00000553999 DBNDD1Q9H9R9 158 aa26.3■■□□□ 1.8
HIF1A-206ENST00000553999 POLLQ9UGP5 575 aa26.3■■□□□ 1.8
HIF1A-206ENST00000553999 ZNRF3Q9ULT6 936 aa26.3■■□□□ 1.8
HIF1A-206ENST00000553999 LTBP1Q14766 1721 aa26.29■■□□□ 1.8
HIF1A-206ENST00000553999 CCER2I3L3R5 266 aa26.29■■□□□ 1.8
HIF1A-206ENST00000553999 LMOD1P29536 600 aaPredicted RBP26.29■■□□□ 1.8
HIF1A-206ENST00000553999 EPS15P42566 896 aa26.29■■□□□ 1.8
HIF1A-206ENST00000553999 CXCL9Q07325 125 aa26.29■■□□□ 1.8
HIF1A-206ENST00000553999 DOK7Q18PE1 504 aa26.29■■□□□ 1.8
HIF1A-206ENST00000553999 SLC4A10Q6U841 1118 aa26.29■■□□□ 1.8
HIF1A-206ENST00000553999 ANKRD18AQ8IVF6 992 aa26.29■■□□□ 1.8
HIF1A-206ENST00000553999 ANKIB1Q9P2G1 1089 aa26.29■■□□□ 1.8
HIF1A-206ENST00000553999 SCN4AP35499 1836 aa26.28■■□□□ 1.8
HIF1A-206ENST00000553999 SPEF2Q9C093 1822 aa26.28■■□□□ 1.8
HIF1A-206ENST00000553999 H7C1W4 665 aa26.28■■□□□ 1.8
HIF1A-206ENST00000553999 UFL1O94874 794 aa26.28■■□□□ 1.8
HIF1A-206ENST00000553999 WASHC4Q2M389 1173 aa26.28■■□□□ 1.8
HIF1A-206ENST00000553999 LINS1Q8NG48 757 aa26.28■■□□□ 1.8
HIF1A-206ENST00000553999 E9PSI1 815 aa26.27■■□□□ 1.8
HIF1A-206ENST00000553999 SCNN1DP51172 638 aa26.27■■□□□ 1.8
HIF1A-206ENST00000553999 TTLL11Q8NHH1 800 aa26.27■■□□□ 1.8
HIF1A-206ENST00000553999 YDJCA8MPS7 323 aa26.26■■□□□ 1.79
HIF1A-206ENST00000553999 FAM161AQ3B820 660 aa26.26■■□□□ 1.79
HIF1A-206ENST00000553999 LDHDQ86WU2 507 aa26.26■■□□□ 1.79
HIF1A-206ENST00000553999 TBC1D16Q8TBP0 767 aa26.26■■□□□ 1.79
HIF1A-206ENST00000553999 GMPSP49915 693 aaPredicted RBP26.25■■□□□ 1.79
HIF1A-206ENST00000553999 SLFN5Q08AF3 891 aa26.25■■□□□ 1.79
HIF1A-206ENST00000553999 BEND3Q5T5X7 828 aa26.25■■□□□ 1.79
HIF1A-206ENST00000553999 MAP1SQ66K74 1059 aaPredicted RBP26.25■■□□□ 1.79
HIF1A-206ENST00000553999 CIAPIN1Q6FI81 312 aa26.25■■□□□ 1.79
HIF1A-206ENST00000553999 CHMP3Q9Y3E7 222 aa26.25■■□□□ 1.79
HIF1A-206ENST00000553999 MIER1Q8N108 512 aa26.24■■□□□ 1.79
HIF1A-206ENST00000553999 CDC5LQ99459 802 aaKnown RBP26.24■■□□□ 1.79
HIF1A-206ENST00000553999 SHTN1A0MZ66 631 aa26.23■■□□□ 1.79
HIF1A-206ENST00000553999 CASP7P55210 303 aa26.23■■□□□ 1.79
HIF1A-206ENST00000553999 DIEXFQ68CQ4 756 aaKnown RBP26.23■■□□□ 1.79
HIF1A-206ENST00000553999 VPS33BQ9H267 617 aa26.23■■□□□ 1.79
HIF1A-206ENST00000553999 GGA1Q9UJY5 639 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms