RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 MRPL50Q8N5N7 158 aaKnown RBP22.05■■□□□ 1.12
CDK4-208ENST00000551706 ZBTB38Q8NAP3 1195 aaPredicted RBP22.05■■□□□ 1.12
CDK4-208ENST00000551706 WBP1LQ9NX94 342 aa22.05■■□□□ 1.12
CDK4-208ENST00000551706 RPGRQ92834 1020 aaKnown RBP22.04■■□□□ 1.12
CDK4-208ENST00000551706 PTPRCP08575 1304 aa22.04■■□□□ 1.12
CDK4-208ENST00000551706 DDNO94850 711 aaPredicted RBP22.03■■□□□ 1.12
CDK4-208ENST00000551706 IGKV5-2P06315 115 aa22.03■■□□□ 1.12
CDK4-208ENST00000551706 ALDH1B1P30837 517 aa22.03■■□□□ 1.12
CDK4-208ENST00000551706 LINS1Q8NG48 757 aa22.03■■□□□ 1.12
CDK4-208ENST00000551706 FAM89AQ96GI7 184 aa22.03■■□□□ 1.12
CDK4-208ENST00000551706 SMC4Q9NTJ3 1288 aa22.03■■□□□ 1.12
CDK4-208ENST00000551706 FER1L6Q2WGJ9 1857 aa22.03■■□□□ 1.12
CDK4-208ENST00000551706 TMEM88BA6NKF7 163 aa22.02■■□□□ 1.12
CDK4-208ENST00000551706 NEURL1BA8MQ27 555 aa22.02■■□□□ 1.12
CDK4-208ENST00000551706 C21orf2O43822 256 aa22.02■■□□□ 1.12
CDK4-208ENST00000551706 PCCAP05165 728 aaPredicted RBP22.02■■□□□ 1.12
CDK4-208ENST00000551706 HOXA10P31260 410 aaPredicted RBP22.02■■□□□ 1.12
CDK4-208ENST00000551706 LDHDQ86WU2 507 aa22.02■■□□□ 1.12
CDK4-208ENST00000551706 ZNF219Q9P2Y4 722 aaPredicted RBP22.02■■□□□ 1.12
CDK4-208ENST00000551706 COL11A2P13942 1736 aaPredicted RBP22.02■■□□□ 1.12
CDK4-208ENST00000551706 IQCA1LA6NCM1 817 aa22.01■■□□□ 1.11
CDK4-208ENST00000551706 HCLS1P14317 486 aaPredicted RBP22.01■■□□□ 1.11
CDK4-208ENST00000551706 PRPF40BQ6NWY9 871 aaKnown RBP22.01■■□□□ 1.11
CDK4-208ENST00000551706 SYNE4Q8N205 404 aa22.01■■□□□ 1.11
CDK4-208ENST00000551706 RBM17Q96I25 401 aaKnown RBP22.01■■□□□ 1.11
CDK4-208ENST00000551706 F6X3S4 739 aa22■■□□□ 1.11
CDK4-208ENST00000551706 IRS4O14654 1257 aaPredicted RBP22■■□□□ 1.11
CDK4-208ENST00000551706 BRPF1P55201 1214 aaPredicted RBP22■■□□□ 1.11
CDK4-208ENST00000551706 MLLT1Q03111 559 aaPredicted RBP22■■□□□ 1.11
CDK4-208ENST00000551706 CWF19L2Q2TBE0 894 aaKnown RBP22■■□□□ 1.11
CDK4-208ENST00000551706 SOGA3Q5TF21 947 aa22■■□□□ 1.11
CDK4-208ENST00000551706 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
CDK4-208ENST00000551706 LTBP3Q9NS15 1303 aa22■■□□□ 1.11
CDK4-208ENST00000551706 HSPA8P11142 646 aaKnown RBP21.99■■□□□ 1.11
CDK4-208ENST00000551706 RTL5Q5HYW3 569 aaPredicted RBP21.99■■□□□ 1.11
CDK4-208ENST00000551706 C3orf67Q6ZVT6 689 aa21.99■■□□□ 1.11
CDK4-208ENST00000551706 CRAMP1Q96RY5 1269 aa21.99■■□□□ 1.11
CDK4-208ENST00000551706 TAOK3Q9H2K8 898 aa21.99■■□□□ 1.11
CDK4-208ENST00000551706 RARSP54136 660 aaKnown RBP21.98■■□□□ 1.11
CDK4-208ENST00000551706 GCKRQ14397 625 aa21.98■■□□□ 1.11
CDK4-208ENST00000551706 ITGBL1O95965 494 aaPredicted RBP21.97■■□□□ 1.11
CDK4-208ENST00000551706 SF3B3Q15393 1217 aaKnown RBP21.97■■□□□ 1.11
CDK4-208ENST00000551706 BEND3Q5T5X7 828 aa21.97■■□□□ 1.11
CDK4-208ENST00000551706 CDHR2Q9BYE9 1310 aa21.97■■□□□ 1.11
CDK4-208ENST00000551706 SCN4AP35499 1836 aa21.96■■□□□ 1.11
CDK4-208ENST00000551706 SLC4A10Q6U841 1118 aa21.96■■□□□ 1.11
CDK4-208ENST00000551706 DDX46Q7L014 1031 aaKnown RBP21.96■■□□□ 1.11
CDK4-208ENST00000551706 TAF1DQ9H5J8 278 aaPredicted RBP21.96■■□□□ 1.11
CDK4-208ENST00000551706 KIF16BQ96L93 1317 aa21.96■■□□□ 1.11
CDK4-208ENST00000551706 PDE8AO60658 829 aa21.95■■□□□ 1.1
CDK4-208ENST00000551706 ALDH1L1O75891 902 aa21.95■■□□□ 1.1
CDK4-208ENST00000551706 MAP2K1Q02750 393 aaPredicted RBP21.95■■□□□ 1.1
CDK4-208ENST00000551706 L3MBTL3Q96JM7 780 aaPredicted RBP21.95■■□□□ 1.1
CDK4-208ENST00000551706 RASSF10A6NK89 507 aa21.94■■□□□ 1.1
CDK4-208ENST00000551706 CCDC85CA6NKD9 419 aa21.94■■□□□ 1.1
CDK4-208ENST00000551706 H7C1W4 665 aa21.94■■□□□ 1.1
CDK4-208ENST00000551706 RGS19P49795 217 aa21.94■■□□□ 1.1
CDK4-208ENST00000551706 DEFB115Q30KQ5 88 aa21.94■■□□□ 1.1
CDK4-208ENST00000551706 C7orf43Q8WVR3 580 aa21.94■■□□□ 1.1
CDK4-208ENST00000551706 SRCIN1Q9C0H9 1055 aa21.94■■□□□ 1.1
CDK4-208ENST00000551706 CCDC93Q567U6 631 aa21.93■■□□□ 1.1
CDK4-208ENST00000551706 EAPPQ56P03 285 aaPredicted RBP21.93■■□□□ 1.1
CDK4-208ENST00000551706 CC2D2BQ6DHV5 1058 aa21.93■■□□□ 1.1
CDK4-208ENST00000551706 UBE3BQ7Z3V4 1068 aa21.93■■□□□ 1.1
CDK4-208ENST00000551706 ABCC4O15439 1325 aa21.92■■□□□ 1.1
CDK4-208ENST00000551706 BBOX1O75936 387 aa21.92■■□□□ 1.1
CDK4-208ENST00000551706 CCDC152Q4G0S7 254 aa21.92■■□□□ 1.1
CDK4-208ENST00000551706 GRIPAP1Q4V328 841 aa21.92■■□□□ 1.1
CDK4-208ENST00000551706 JARID2Q92833 1246 aaPredicted RBP21.92■■□□□ 1.1
CDK4-208ENST00000551706 API5Q9BZZ5 524 aaKnown RBP21.92■■□□□ 1.1
CDK4-208ENST00000551706 TMX4Q9H1E5 349 aaPredicted RBP21.92■■□□□ 1.1
CDK4-208ENST00000551706 NOB1Q9ULX3 412 aaKnown RBP21.92■■□□□ 1.1
CDK4-208ENST00000551706 CLEC11AQ9Y240 323 aa21.92■■□□□ 1.1
CDK4-208ENST00000551706 DDX60Q8IY21 1712 aaKnown RBP21.92■■□□□ 1.1
CDK4-208ENST00000551706 WDR33Q9C0J8 1336 aaKnown RBP21.91■■□□□ 1.1
CDK4-208ENST00000551706 PPEF1O14829 653 aaPredicted RBP21.91■■□□□ 1.1
CDK4-208ENST00000551706 GRAPQ13588 217 aa21.91■■□□□ 1.1
CDK4-208ENST00000551706 RTKN2Q8IZC4 609 aa21.91■■□□□ 1.1
CDK4-208ENST00000551706 GRAPLQ8TC17 118 aaPredicted RBP21.91■■□□□ 1.1
CDK4-208ENST00000551706 ARHGAP45Q92619 1136 aa21.91■■□□□ 1.1
CDK4-208ENST00000551706 SLX4Q8IY92 1834 aa21.91■■□□□ 1.1
CDK4-208ENST00000551706 LAMB2P55268 1798 aa21.91■■□□□ 1.1
CDK4-208ENST00000551706 GRM8O00222 908 aa21.9■■□□□ 1.1
CDK4-208ENST00000551706 IPO8O15397 1037 aaKnown RBP21.9■■□□□ 1.1
CDK4-208ENST00000551706 CTSWP56202 376 aa21.9■■□□□ 1.1
CDK4-208ENST00000551706 TMC4Q7Z404 712 aa21.9■■□□□ 1.1
CDK4-208ENST00000551706 PLA2G12BQ9BX93 195 aa21.9■■□□□ 1.1
CDK4-208ENST00000551706 C9orf78Q9NZ63 289 aaPredicted RBP21.9■■□□□ 1.1
CDK4-208ENST00000551706 CASP7P55210 303 aa21.89■■□□□ 1.09
CDK4-208ENST00000551706 HACL1Q9UJ83 578 aa21.89■■□□□ 1.09
CDK4-208ENST00000551706 ATP6V0A2Q9Y487 856 aa21.88■■□□□ 1.09
CDK4-208ENST00000551706 CCT4P50991 539 aaKnown RBP21.87■■□□□ 1.09
CDK4-208ENST00000551706 CNTROBQ8N137 903 aa21.87■■□□□ 1.09
CDK4-208ENST00000551706 ABT1Q9ULW3 272 aaKnown RBP21.87■■□□□ 1.09
CDK4-208ENST00000551706 CACNA1SQ13698 1873 aa21.87■■□□□ 1.09
CDK4-208ENST00000551706 ADAMTSL1Q8N6G6 1762 aa21.87■■□□□ 1.09
CDK4-208ENST00000551706 BCAR3O75815 825 aa21.86■■□□□ 1.09
CDK4-208ENST00000551706 EPHX2P34913 555 aa21.86■■□□□ 1.09
CDK4-208ENST00000551706 PNMA8AQ86V59 439 aaPredicted RBP21.86■■□□□ 1.09
CDK4-208ENST00000551706 SP8Q8IXZ3 490 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms