RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
LETMD1-228ENST00000550929 PSMD1Q99460 953 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 MKRN1Q9UHC7 482 aaKnown RBP11.79□□□□□ -0.52
LETMD1-228ENST00000550929 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
LETMD1-228ENST00000550929 HACL1Q9UJ83 578 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 DICER1Q9UPY3 1922 aaKnown RBP11.79□□□□□ -0.52
LETMD1-228ENST00000550929 IBTKQ9P2D0 1353 aaPredicted RBP11.79□□□□□ -0.52
LETMD1-228ENST00000550929 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 POTEB2H3BUK9 544 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
LETMD1-228ENST00000550929 APAF1O14727 1248 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 EPHX2P34913 555 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
LETMD1-228ENST00000550929 SLC10A5Q5PT55 438 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 LDHDQ86WU2 507 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 ABCC4O15439 1325 aa11.78□□□□□ -0.52
LETMD1-228ENST00000550929 NUBP1P53384 320 aa11.78□□□□□ -0.52
LETMD1-228ENST00000550929 AOC3Q16853 763 aa11.78□□□□□ -0.52
LETMD1-228ENST00000550929 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
LETMD1-228ENST00000550929 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
LETMD1-228ENST00000550929 COL13A1Q5TAT6 717 aaPredicted RBP11.78□□□□□ -0.52
LETMD1-228ENST00000550929 DUSP27Q5VZP5 1158 aa11.78□□□□□ -0.52
LETMD1-228ENST00000550929 MBIPQ9NS73 344 aa11.78□□□□□ -0.52
LETMD1-228ENST00000550929 COL4A5P29400 1685 aa11.77□□□□□ -0.52
LETMD1-228ENST00000550929 SNED1Q8TER0 1413 aa11.77□□□□□ -0.52
LETMD1-228ENST00000550929 PPIP5K2O43314 1243 aa11.77□□□□□ -0.53
LETMD1-228ENST00000550929 HSPA1AP0DMV8 641 aaKnown RBP11.77□□□□□ -0.53
LETMD1-228ENST00000550929 HSPA1BP0DMV9 641 aaKnown RBP11.77□□□□□ -0.53
LETMD1-228ENST00000550929 MAP1SQ66K74 1059 aaPredicted RBP11.77□□□□□ -0.53
LETMD1-228ENST00000550929 CFAP44Q96MT7 982 aa11.77□□□□□ -0.53
LETMD1-228ENST00000550929 TMX4Q9H1E5 349 aaPredicted RBP11.77□□□□□ -0.53
LETMD1-228ENST00000550929 ATP6V0A2Q9Y487 856 aa11.77□□□□□ -0.53
LETMD1-228ENST00000550929 RIC1Q4ADV7 1423 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 MAP3K13O43283 966 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 EPS15P42566 896 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 CCDC184Q52MB2 194 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
LETMD1-228ENST00000550929 NIM1KQ8IY84 436 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 GPC2Q8N158 579 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 PLBD2Q8NHP8 589 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 FAM89AQ96GI7 184 aa11.76□□□□□ -0.53
LETMD1-228ENST00000550929 SH3TC1Q8TE82 1336 aa11.75□□□□□ -0.53
LETMD1-228ENST00000550929 ITGBL1O95965 494 aaPredicted RBP11.75□□□□□ -0.53
LETMD1-228ENST00000550929 FMR1Q06787 632 aaKnown RBP eCLIP11.75□□□□□ -0.53
LETMD1-228ENST00000550929 DPP8Q6V1X1 898 aaPredicted RBP11.75□□□□□ -0.53
LETMD1-228ENST00000550929 CNTROBQ8N137 903 aa11.75□□□□□ -0.53
LETMD1-228ENST00000550929 PHAXQ9H814 394 aaKnown RBP11.75□□□□□ -0.53
LETMD1-228ENST00000550929 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
LETMD1-228ENST00000550929 PASKQ96RG2 1323 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 BBOX1O75936 387 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 LMOD1P29536 600 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-228ENST00000550929 GRAPQ13588 217 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-228ENST00000550929 SP8Q8IXZ3 490 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 MPNDQ8N594 471 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 GRAPLQ8TC17 118 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-228ENST00000550929 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
LETMD1-228ENST00000550929 HOXB7P09629 217 aa11.73□□□□□ -0.53
LETMD1-228ENST00000550929 SCNN1DP51172 638 aa11.73□□□□□ -0.53
LETMD1-228ENST00000550929 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
LETMD1-228ENST00000550929 C8orf58Q8NAV2 365 aa11.73□□□□□ -0.53
LETMD1-228ENST00000550929 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
LETMD1-228ENST00000550929 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
LETMD1-228ENST00000550929 HYPKQ9NX55 129 aa11.73□□□□□ -0.53
LETMD1-228ENST00000550929 TMEM88BA6NKF7 163 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 RAD17O75943 681 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 C7P10643 843 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 ATN1P54259 1190 aaPredicted RBP11.72□□□□□ -0.53
LETMD1-228ENST00000550929 GNAI1P63096 354 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 CXCL9Q07325 125 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 SUPT20HQ8NEM7 779 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 CELF1Q92879 486 aaKnown RBP11.72□□□□□ -0.53
LETMD1-228ENST00000550929 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 MYD88Q99836 296 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
LETMD1-228ENST00000550929 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
LETMD1-228ENST00000550929 VEGFBP49765 207 aa11.71□□□□□ -0.53
LETMD1-228ENST00000550929 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
LETMD1-228ENST00000550929 RTFDC1Q9BY42 306 aaPredicted RBP11.71□□□□□ -0.53
LETMD1-228ENST00000550929 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
LETMD1-228ENST00000550929 ZNRF3Q9ULT6 936 aa11.71□□□□□ -0.53
LETMD1-228ENST00000550929 SCN4AP35499 1836 aa11.71□□□□□ -0.54
LETMD1-228ENST00000550929 CNTNAP1P78357 1384 aa11.7□□□□□ -0.54
LETMD1-228ENST00000550929 IRS4O14654 1257 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-228ENST00000550929 GMPSP49915 693 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-228ENST00000550929 TNS4Q8IZW8 715 aa11.7□□□□□ -0.54
LETMD1-228ENST00000550929 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
LETMD1-228ENST00000550929 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
LETMD1-228ENST00000550929 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-228ENST00000550929 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-228ENST00000550929 BMP2KQ9NSY1 1161 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-228ENST00000550929 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
LETMD1-228ENST00000550929 SHTN1A0MZ66 631 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms