RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 CCDC85AQ96PX6 553 aaPredicted RBP20.47■□□□□ 0.87
LETMD1-205ENST00000546992 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
LETMD1-205ENST00000546992 SF3B3Q15393 1217 aaKnown RBP20.46■□□□□ 0.87
LETMD1-205ENST00000546992 CRY2Q49AN0 593 aa20.46■□□□□ 0.87
LETMD1-205ENST00000546992 CEP85Q6P2H3 762 aa20.46■□□□□ 0.87
LETMD1-205ENST00000546992 SIRT2Q8IXJ6 389 aa20.46■□□□□ 0.87
LETMD1-205ENST00000546992 PNMA6EA0A0J9YXQ4 647 aa20.45■□□□□ 0.86
LETMD1-205ENST00000546992 FAM161AQ3B820 660 aa20.45■□□□□ 0.86
LETMD1-205ENST00000546992 GREM2Q9H772 168 aa20.45■□□□□ 0.86
LETMD1-205ENST00000546992 SLX4Q8IY92 1834 aa20.45■□□□□ 0.86
LETMD1-205ENST00000546992 RTL9Q8NET4 1388 aa20.45■□□□□ 0.86
LETMD1-205ENST00000546992 MTX1Q13505 466 aa20.44■□□□□ 0.86
LETMD1-205ENST00000546992 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
LETMD1-205ENST00000546992 LRRC37AA6NMS7 1700 aa20.44■□□□□ 0.86
LETMD1-205ENST00000546992 NEFLP07196 543 aa20.43■□□□□ 0.86
LETMD1-205ENST00000546992 CHRNA5P30532 468 aa20.43■□□□□ 0.86
LETMD1-205ENST00000546992 CHMP4BQ9H444 224 aaKnown RBP20.43■□□□□ 0.86
LETMD1-205ENST00000546992 SEC31BQ9NQW1 1179 aa20.43■□□□□ 0.86
LETMD1-205ENST00000546992 SRGNP10124 158 aa20.42■□□□□ 0.86
LETMD1-205ENST00000546992 RFX5P48382 616 aaPredicted RBP20.42■□□□□ 0.86
LETMD1-205ENST00000546992 SLC51AQ86UW1 340 aa20.42■□□□□ 0.86
LETMD1-205ENST00000546992 SRCAPQ6ZRS2 3230 aa20.41■□□□□ 0.86
LETMD1-205ENST00000546992 PDE6BP35913 854 aa20.41■□□□□ 0.86
LETMD1-205ENST00000546992 ATP8B2P98198 1209 aa20.41■□□□□ 0.86
LETMD1-205ENST00000546992 HSP90B1P14625 803 aaKnown RBP20.4■□□□□ 0.86
LETMD1-205ENST00000546992 KCNA3P22001 575 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 ITGA6P23229 1130 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 POLA2Q14181 598 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 CCDC152Q4G0S7 254 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 C2CD5Q86YS7 1000 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 NLGN2Q8NFZ4 835 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 HDAC5Q9UQL6 1122 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 CHMP3Q9Y3E7 222 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 CD2APQ9Y5K6 639 aa20.4■□□□□ 0.86
LETMD1-205ENST00000546992 SRGAP3O43295 1099 aa20.39■□□□□ 0.85
LETMD1-205ENST00000546992 DPEP1P16444 411 aa20.39■□□□□ 0.85
LETMD1-205ENST00000546992 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.85
LETMD1-205ENST00000546992 AAMPQ13685 434 aa20.39■□□□□ 0.85
LETMD1-205ENST00000546992 KLHL34Q8N239 644 aa20.39■□□□□ 0.85
LETMD1-205ENST00000546992 KLHDC4Q8TBB5 520 aa20.39■□□□□ 0.85
LETMD1-205ENST00000546992 SSH3Q8TE77 659 aa20.39■□□□□ 0.85
LETMD1-205ENST00000546992 A0A0G2JLW4 131 aa20.38■□□□□ 0.85
LETMD1-205ENST00000546992 RPAP2Q8IXW5 612 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-205ENST00000546992 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
LETMD1-205ENST00000546992 ZNF594Q96JF6 807 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-205ENST00000546992 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-205ENST00000546992 PPP1R1BQ9UD71 204 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-205ENST00000546992 PA2G4Q9UQ80 394 aaKnown RBP20.38■□□□□ 0.85
LETMD1-205ENST00000546992 LTBP1Q14766 1721 aa20.38■□□□□ 0.85
LETMD1-205ENST00000546992 ARFGEF1Q9Y6D6 1849 aa20.37■□□□□ 0.85
LETMD1-205ENST00000546992 PTPN12Q05209 780 aaKnown RBP20.37■□□□□ 0.85
LETMD1-205ENST00000546992 RPGRQ92834 1020 aaKnown RBP20.37■□□□□ 0.85
LETMD1-205ENST00000546992 H0YIN7 160 aa20.36■□□□□ 0.85
LETMD1-205ENST00000546992 NPR1P16066 1061 aa20.36■□□□□ 0.85
LETMD1-205ENST00000546992 TGFB2P61812 414 aa20.36■□□□□ 0.85
LETMD1-205ENST00000546992 MASTLQ96GX5 879 aa20.36■□□□□ 0.85
LETMD1-205ENST00000546992 ANKRD18BA2A2Z9 1011 aa20.35■□□□□ 0.85
LETMD1-205ENST00000546992 IFIT5Q13325 482 aaKnown RBP20.35■□□□□ 0.85
LETMD1-205ENST00000546992 GRAPQ13588 217 aa20.35■□□□□ 0.85
LETMD1-205ENST00000546992 CCDC57Q2TAC2 916 aa20.35■□□□□ 0.85
LETMD1-205ENST00000546992 STYK1Q6J9G0 422 aa20.35■□□□□ 0.85
LETMD1-205ENST00000546992 GRAPLQ8TC17 118 aaPredicted RBP20.35■□□□□ 0.85
LETMD1-205ENST00000546992 CRAMP1Q96RY5 1269 aa20.35■□□□□ 0.85
LETMD1-205ENST00000546992 DDX46Q7L014 1031 aaKnown RBP20.34■□□□□ 0.85
LETMD1-205ENST00000546992 ZNF622Q969S3 477 aaKnown RBP eCLIP20.34■□□□□ 0.85
LETMD1-205ENST00000546992 RBM17Q96I25 401 aaKnown RBP20.34■□□□□ 0.85
LETMD1-205ENST00000546992 PUS3Q9BZE2 481 aaKnown RBP20.34■□□□□ 0.85
LETMD1-205ENST00000546992 IGHDP01880 384 aa20.33■□□□□ 0.85
LETMD1-205ENST00000546992 COPRSQ9NQ92 184 aa20.33■□□□□ 0.85
LETMD1-205ENST00000546992 PDZRN3Q9UPQ7 1066 aa20.33■□□□□ 0.85
LETMD1-205ENST00000546992 HDAC1Q13547 482 aaPredicted RBP20.32■□□□□ 0.84
LETMD1-205ENST00000546992 LRRC24Q50LG9 513 aa20.32■□□□□ 0.84
LETMD1-205ENST00000546992 SYT17Q9BSW7 474 aa20.32■□□□□ 0.84
LETMD1-205ENST00000546992 SIL1Q9H173 461 aa20.32■□□□□ 0.84
LETMD1-205ENST00000546992 WWC3Q9ULE0 1092 aa20.32■□□□□ 0.84
LETMD1-205ENST00000546992 SNED1Q8TER0 1413 aa20.32■□□□□ 0.84
LETMD1-205ENST00000546992 DUOX1Q9NRD9 1551 aa20.31■□□□□ 0.84
LETMD1-205ENST00000546992 RPS8P62241 208 aaKnown RBP20.31■□□□□ 0.84
LETMD1-205ENST00000546992 PRPF40BQ6NWY9 871 aaKnown RBP20.31■□□□□ 0.84
LETMD1-205ENST00000546992 OLFM4Q6UX06 510 aa20.31■□□□□ 0.84
LETMD1-205ENST00000546992 ATG9AQ7Z3C6 839 aa20.31■□□□□ 0.84
LETMD1-205ENST00000546992 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
LETMD1-205ENST00000546992 CDC5LQ99459 802 aaKnown RBP20.31■□□□□ 0.84
LETMD1-205ENST00000546992 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.31■□□□□ 0.84
LETMD1-205ENST00000546992 GOLGB1Q14789 3259 aaKnown RBP20.31■□□□□ 0.84
LETMD1-205ENST00000546992 ERICH6BQ5W0A0 696 aa20.3■□□□□ 0.84
LETMD1-205ENST00000546992 EXOC6BQ9Y2D4 811 aa20.3■□□□□ 0.84
LETMD1-205ENST00000546992 NOP58Q9Y2X3 529 aaKnown RBP20.3■□□□□ 0.84
LETMD1-205ENST00000546992 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
LETMD1-205ENST00000546992 ARAP2Q8WZ64 1704 aa20.3■□□□□ 0.84
LETMD1-205ENST00000546992 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
LETMD1-205ENST00000546992 HMMRO75330 724 aa20.29■□□□□ 0.84
LETMD1-205ENST00000546992 TAF7LQ5H9L4 462 aa20.29■□□□□ 0.84
LETMD1-205ENST00000546992 C7orf43Q8WVR3 580 aa20.29■□□□□ 0.84
LETMD1-205ENST00000546992 RIPOR2Q9Y4F9 1068 aa20.29■□□□□ 0.84
LETMD1-205ENST00000546992 EYA2O00167 538 aa20.28■□□□□ 0.84
LETMD1-205ENST00000546992 ALDH1B1P30837 517 aa20.28■□□□□ 0.84
LETMD1-205ENST00000546992 IGHMBP2P38935 993 aaKnown RBP20.28■□□□□ 0.84
LETMD1-205ENST00000546992 CNKSR1Q969H4 720 aa20.28■□□□□ 0.84
LETMD1-205ENST00000546992 BSDC1Q9NW68 430 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms