RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 C2CD5Q86YS7 1000 aa21.24■□□□□ 0.99
SF3B2-211ENST00000531041 TTLL11Q8NHH1 800 aa21.24■□□□□ 0.99
SF3B2-211ENST00000531041 ZBTB40Q9NUA8 1239 aa21.24■□□□□ 0.99
SF3B2-211ENST00000531041 SPEF2Q9C093 1822 aa21.24■□□□□ 0.99
SF3B2-211ENST00000531041 GNAI2P04899 355 aa21.23■□□□□ 0.99
SF3B2-211ENST00000531041 RABL6Q3YEC7 729 aaPredicted RBP21.23■□□□□ 0.99
SF3B2-211ENST00000531041 CCDC152Q4G0S7 254 aa21.23■□□□□ 0.99
SF3B2-211ENST00000531041 CRBNQ96SW2 442 aa21.23■□□□□ 0.99
SF3B2-211ENST00000531041 BICC1Q9H694 974 aaKnown RBP21.23■□□□□ 0.99
SF3B2-211ENST00000531041 LRRFIP2Q9Y608 721 aaKnown RBP21.23■□□□□ 0.99
SF3B2-211ENST00000531041 NPR1P16066 1061 aa21.22■□□□□ 0.99
SF3B2-211ENST00000531041 CHRNA5P30532 468 aa21.22■□□□□ 0.99
SF3B2-211ENST00000531041 HOXA10P31260 410 aaPredicted RBP21.22■□□□□ 0.99
SF3B2-211ENST00000531041 RPGRQ92834 1020 aaKnown RBP21.22■□□□□ 0.99
SF3B2-211ENST00000531041 MASTLQ96GX5 879 aa21.22■□□□□ 0.99
SF3B2-211ENST00000531041 SYT17Q9BSW7 474 aa21.22■□□□□ 0.99
SF3B2-211ENST00000531041 RTL9Q8NET4 1388 aa21.22■□□□□ 0.99
SF3B2-211ENST00000531041 SLX4Q8IY92 1834 aa21.22■□□□□ 0.99
SF3B2-211ENST00000531041 A0A0G2JLW4 131 aa21.21■□□□□ 0.99
SF3B2-211ENST00000531041 DPEP1P16444 411 aa21.21■□□□□ 0.99
SF3B2-211ENST00000531041 KCNA3P22001 575 aa21.21■□□□□ 0.99
SF3B2-211ENST00000531041 STYK1Q6J9G0 422 aa21.21■□□□□ 0.99
SF3B2-211ENST00000531041 LMBR1LQ6UX01 489 aa21.21■□□□□ 0.99
SF3B2-211ENST00000531041 ANKRD44Q8N8A2 993 aa21.21■□□□□ 0.99
SF3B2-211ENST00000531041 ARFGEF1Q9Y6D6 1849 aa21.21■□□□□ 0.99
SF3B2-211ENST00000531041 NLGN2Q8NFZ4 835 aa21.21■□□□□ 0.99
SF3B2-211ENST00000531041 RBM17Q96I25 401 aaKnown RBP21.2■□□□□ 0.98
SF3B2-211ENST00000531041 CRAMP1Q96RY5 1269 aa21.2■□□□□ 0.98
SF3B2-211ENST00000531041 ALDH1B1P30837 517 aa21.19■□□□□ 0.98
SF3B2-211ENST00000531041 DDX46Q7L014 1031 aaKnown RBP21.19■□□□□ 0.98
SF3B2-211ENST00000531041 GREM2Q9H772 168 aa21.19■□□□□ 0.98
SF3B2-211ENST00000531041 SRCAPQ6ZRS2 3230 aa21.19■□□□□ 0.98
SF3B2-211ENST00000531041 MTX1Q13505 466 aa21.18■□□□□ 0.98
SF3B2-211ENST00000531041 ZNF622Q969S3 477 aaKnown RBP eCLIP21.18■□□□□ 0.982e-11■■□□□ 14.2
SF3B2-211ENST00000531041 CCDC85AQ96PX6 553 aaPredicted RBP21.18■□□□□ 0.98
SF3B2-211ENST00000531041 C1orf115Q9H7X2 142 aa21.18■□□□□ 0.98
SF3B2-211ENST00000531041 COL4A1P02462 1669 aa21.17■□□□□ 0.98
SF3B2-211ENST00000531041 AAMPQ13685 434 aa21.17■□□□□ 0.98
SF3B2-211ENST00000531041 FAM161AQ3B820 660 aa21.17■□□□□ 0.98
SF3B2-211ENST00000531041 CNKSR1Q969H4 720 aa21.17■□□□□ 0.98
SF3B2-211ENST00000531041 PIM2Q9P1W9 311 aa21.17■□□□□ 0.98
SF3B2-211ENST00000531041 CHMP3Q9Y3E7 222 aa21.17■□□□□ 0.98
SF3B2-211ENST00000531041 ITGA6P23229 1130 aa21.16■□□□□ 0.98
SF3B2-211ENST00000531041 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
SF3B2-211ENST00000531041 SEC31BQ9NQW1 1179 aa21.16■□□□□ 0.98
SF3B2-211ENST00000531041 LRRC37AA6NMS7 1700 aa21.16■□□□□ 0.98
SF3B2-211ENST00000531041 IFIT5Q13325 482 aaKnown RBP21.15■□□□□ 0.98
SF3B2-211ENST00000531041 GRAPQ13588 217 aa21.15■□□□□ 0.98
SF3B2-211ENST00000531041 CCDC57Q2TAC2 916 aa21.15■□□□□ 0.98
SF3B2-211ENST00000531041 TTLL6Q8N841 843 aa21.15■□□□□ 0.98
SF3B2-211ENST00000531041 EXOC6Q8TAG9 804 aa21.15■□□□□ 0.98
SF3B2-211ENST00000531041 GRAPLQ8TC17 118 aaPredicted RBP21.15■□□□□ 0.98
SF3B2-211ENST00000531041 A0A1B0GUL6 1792 aa21.14■□□□□ 0.98
SF3B2-211ENST00000531041 ANKRD18BA2A2Z9 1011 aa21.14■□□□□ 0.98
SF3B2-211ENST00000531041 CDC5LQ99459 802 aaKnown RBP21.14■□□□□ 0.98
SF3B2-211ENST00000531041 BBOX1O75936 387 aa21.13■□□□□ 0.97
SF3B2-211ENST00000531041 RPS8P62241 208 aaKnown RBP21.13■□□□□ 0.97
SF3B2-211ENST00000531041 ATP8B2P98198 1209 aa21.13■□□□□ 0.97
SF3B2-211ENST00000531041 CEP85Q6P2H3 762 aa21.13■□□□□ 0.97
SF3B2-211ENST00000531041 CELF1Q92879 486 aaKnown RBP21.13■□□□□ 0.97
SF3B2-211ENST00000531041 SRGAP3O43295 1099 aa21.12■□□□□ 0.97
SF3B2-211ENST00000531041 PRPF40BQ6NWY9 871 aaKnown RBP21.12■□□□□ 0.97
SF3B2-211ENST00000531041 RPAP2Q8IXW5 612 aaPredicted RBP21.12■□□□□ 0.97
SF3B2-211ENST00000531041 PNMA6EA0A0J9YXQ4 647 aa21.12■□□□□ 0.97
SF3B2-211ENST00000531041 RFX5P48382 616 aaPredicted RBP21.12■□□□□ 0.97
SF3B2-211ENST00000531041 DALRD3Q5D0E6 543 aaKnown RBP21.12■□□□□ 0.97
SF3B2-211ENST00000531041 ANKRD18AQ8IVF6 992 aa21.12■□□□□ 0.97
SF3B2-211ENST00000531041 TMC4Q7Z404 712 aa21.11■□□□□ 0.97
SF3B2-211ENST00000531041 SSH3Q8TE77 659 aa21.11■□□□□ 0.97
SF3B2-211ENST00000531041 FER1L6Q2WGJ9 1857 aa21.11■□□□□ 0.97
SF3B2-211ENST00000531041 IGHMBP2P38935 993 aaKnown RBP21.1■□□□□ 0.97
SF3B2-211ENST00000531041 POLA2Q14181 598 aa21.1■□□□□ 0.97
SF3B2-211ENST00000531041 PPEF1O14829 653 aaPredicted RBP21.09■□□□□ 0.97
SF3B2-211ENST00000531041 PTPN12Q05209 780 aaKnown RBP21.09■□□□□ 0.97
SF3B2-211ENST00000531041 TAF7LQ5H9L4 462 aa21.09■□□□□ 0.97
SF3B2-211ENST00000531041 C7orf43Q8WVR3 580 aa21.09■□□□□ 0.97
SF3B2-211ENST00000531041 ZNF594Q96JF6 807 aaPredicted RBP21.09■□□□□ 0.97
SF3B2-211ENST00000531041 BSDC1Q9NW68 430 aaPredicted RBP21.09■□□□□ 0.97
SF3B2-211ENST00000531041 NEFLP07196 543 aa21.08■□□□□ 0.97
SF3B2-211ENST00000531041 SIRT2Q8IXJ6 389 aa21.08■□□□□ 0.97
SF3B2-211ENST00000531041 SP8Q8IXZ3 490 aa21.08■□□□□ 0.97
SF3B2-211ENST00000531041 MPHOSPH8Q99549 860 aa21.08■□□□□ 0.97
SF3B2-211ENST00000531041 COPRSQ9NQ92 184 aa21.08■□□□□ 0.97
SF3B2-211ENST00000531041 ATP6V0A2Q9Y487 856 aa21.08■□□□□ 0.97
SF3B2-211ENST00000531041 PCDHB15Q9Y5E8 787 aa21.08■□□□□ 0.97
SF3B2-211ENST00000531041 LTBP1Q14766 1721 aa21.08■□□□□ 0.96
SF3B2-211ENST00000531041 LDHAL6AQ6ZMR3 332 aa21.07■□□□□ 0.96
SF3B2-211ENST00000531041 KLHDC4Q8TBB5 520 aa21.07■□□□□ 0.96
SF3B2-211ENST00000531041 FBXO3Q9UK99 471 aa21.07■□□□□ 0.96
SF3B2-211ENST00000531041 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
SF3B2-211ENST00000531041 CCDC88AQ3V6T2 1871 aa21.06■□□□□ 0.96
SF3B2-211ENST00000531041 HMMRO75330 724 aa21.06■□□□□ 0.96
SF3B2-211ENST00000531041 WWC3Q9ULE0 1092 aa21.06■□□□□ 0.96
SF3B2-211ENST00000531041 CC2D2BQ6DHV5 1058 aa21.05■□□□□ 0.96
SF3B2-211ENST00000531041 C21orf2O43822 256 aa21.04■□□□□ 0.96
SF3B2-211ENST00000531041 SOGA3Q5TF21 947 aa21.04■□□□□ 0.96
SF3B2-211ENST00000531041 CNNM1Q9NRU3 951 aa21.04■□□□□ 0.96
SF3B2-211ENST00000531041 PA2G4Q9UQ80 394 aaKnown RBP21.04■□□□□ 0.96
SF3B2-211ENST00000531041 RIPOR2Q9Y4F9 1068 aa21.04■□□□□ 0.96
SF3B2-211ENST00000531041 EYA2O00167 538 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms