RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
EIF3F-202ENST00000528653 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
EIF3F-202ENST00000528653 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
EIF3F-202ENST00000528653 BRCA1P38398 1863 aaKnown RBP17.16■□□□□ 0.34
EIF3F-202ENST00000528653 A0A0G2JLW4 131 aa17.15■□□□□ 0.34
EIF3F-202ENST00000528653 H0YIN7 160 aa17.15■□□□□ 0.34
EIF3F-202ENST00000528653 GNAI2P04899 355 aa17.15■□□□□ 0.34
EIF3F-202ENST00000528653 SRGNP10124 158 aa17.15■□□□□ 0.34
EIF3F-202ENST00000528653 SF3B3Q15393 1217 aaKnown RBP17.15■□□□□ 0.34
EIF3F-202ENST00000528653 ANKRD44Q8N8A2 993 aa17.15■□□□□ 0.34
EIF3F-202ENST00000528653 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
EIF3F-202ENST00000528653 SYT17Q9BSW7 474 aa17.15■□□□□ 0.34
EIF3F-202ENST00000528653 COL4A1P02462 1669 aa17.15■□□□□ 0.34
EIF3F-202ENST00000528653 TAF1P21675 1872 aa17.14■□□□□ 0.33
EIF3F-202ENST00000528653 TGFB2P61812 414 aa17.14■□□□□ 0.33
EIF3F-202ENST00000528653 FAM161AQ3B820 660 aa17.14■□□□□ 0.33
EIF3F-202ENST00000528653 CCDC152Q4G0S7 254 aa17.14■□□□□ 0.33
EIF3F-202ENST00000528653 LMBR1LQ6UX01 489 aa17.14■□□□□ 0.33
EIF3F-202ENST00000528653 WWC3Q9ULE0 1092 aa17.14■□□□□ 0.33
EIF3F-202ENST00000528653 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
EIF3F-202ENST00000528653 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
EIF3F-202ENST00000528653 SPEF2Q9C093 1822 aa17.13■□□□□ 0.33
EIF3F-202ENST00000528653 NPR1P16066 1061 aa17.13■□□□□ 0.33
EIF3F-202ENST00000528653 TTLL11Q8NHH1 800 aa17.13■□□□□ 0.33
EIF3F-202ENST00000528653 ZNF622Q969S3 477 aaKnown RBP eCLIP17.13■□□□□ 0.33
EIF3F-202ENST00000528653 MASTLQ96GX5 879 aa17.13■□□□□ 0.33
EIF3F-202ENST00000528653 GREM2Q9H772 168 aa17.13■□□□□ 0.33
EIF3F-202ENST00000528653 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
EIF3F-202ENST00000528653 CSF1RP07333 972 aa17.12■□□□□ 0.33
EIF3F-202ENST00000528653 RABL6Q3YEC7 729 aaPredicted RBP17.12■□□□□ 0.33
EIF3F-202ENST00000528653 STYK1Q6J9G0 422 aa17.12■□□□□ 0.33
EIF3F-202ENST00000528653 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
EIF3F-202ENST00000528653 CHMP4BQ9H444 224 aaKnown RBP17.12■□□□□ 0.33
EIF3F-202ENST00000528653 SEC31BQ9NQW1 1179 aa17.12■□□□□ 0.33
EIF3F-202ENST00000528653 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
EIF3F-202ENST00000528653 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
EIF3F-202ENST00000528653 KCNA3P22001 575 aa17.11■□□□□ 0.33
EIF3F-202ENST00000528653 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
EIF3F-202ENST00000528653 EXOC6Q8TAG9 804 aa17.11■□□□□ 0.33
EIF3F-202ENST00000528653 SLX4Q8IY92 1834 aa17.1■□□□□ 0.33
EIF3F-202ENST00000528653 ITGA6P23229 1130 aa17.1■□□□□ 0.33
EIF3F-202ENST00000528653 HOXA10P31260 410 aaPredicted RBP17.1■□□□□ 0.33
EIF3F-202ENST00000528653 GRAPQ13588 217 aa17.09■□□□□ 0.33
EIF3F-202ENST00000528653 GRAPLQ8TC17 118 aaPredicted RBP17.09■□□□□ 0.33
EIF3F-202ENST00000528653 CELF1Q92879 486 aaKnown RBP17.09■□□□□ 0.33
EIF3F-202ENST00000528653 CRAMP1Q96RY5 1269 aa17.09■□□□□ 0.33
EIF3F-202ENST00000528653 ANKRD18BA2A2Z9 1011 aa17.08■□□□□ 0.32
EIF3F-202ENST00000528653 PRPF40BQ6NWY9 871 aaKnown RBP17.08■□□□□ 0.32
EIF3F-202ENST00000528653 TTLL6Q8N841 843 aa17.08■□□□□ 0.32
EIF3F-202ENST00000528653 CNKSR1Q969H4 720 aa17.08■□□□□ 0.32
EIF3F-202ENST00000528653 CDC5LQ99459 802 aaKnown RBP17.08■□□□□ 0.32
EIF3F-202ENST00000528653 PIM2Q9P1W9 311 aa17.08■□□□□ 0.32
EIF3F-202ENST00000528653 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
EIF3F-202ENST00000528653 LRRC37AA6NMS7 1700 aa17.07■□□□□ 0.32
EIF3F-202ENST00000528653 IFIT5Q13325 482 aaKnown RBP17.07■□□□□ 0.32
EIF3F-202ENST00000528653 MTX1Q13505 466 aa17.07■□□□□ 0.32
EIF3F-202ENST00000528653 CCDC57Q2TAC2 916 aa17.07■□□□□ 0.32
EIF3F-202ENST00000528653 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
EIF3F-202ENST00000528653 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
EIF3F-202ENST00000528653 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
EIF3F-202ENST00000528653 PNMA6EA0A0J9YXQ4 647 aa17.06■□□□□ 0.32
EIF3F-202ENST00000528653 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
EIF3F-202ENST00000528653 PPEF1O14829 653 aaPredicted RBP17.06■□□□□ 0.32
EIF3F-202ENST00000528653 SRGAP3O43295 1099 aa17.06■□□□□ 0.32
EIF3F-202ENST00000528653 NEFLP07196 543 aa17.06■□□□□ 0.32
EIF3F-202ENST00000528653 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
EIF3F-202ENST00000528653 DALRD3Q5D0E6 543 aaKnown RBP17.06■□□□□ 0.32
EIF3F-202ENST00000528653 TAF7LQ5H9L4 462 aa17.06■□□□□ 0.32
EIF3F-202ENST00000528653 ANKRD18AQ8IVF6 992 aa17.06■□□□□ 0.32
EIF3F-202ENST00000528653 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
EIF3F-202ENST00000528653 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
EIF3F-202ENST00000528653 BCS1LQ9Y276 419 aa17.06■□□□□ 0.32
EIF3F-202ENST00000528653 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
EIF3F-202ENST00000528653 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
EIF3F-202ENST00000528653 KLHDC4Q8TBB5 520 aa17.05■□□□□ 0.32
EIF3F-202ENST00000528653 CHD4Q14839 1912 aa17.04■□□□□ 0.32
EIF3F-202ENST00000528653 IGHMBP2P38935 993 aaKnown RBP17.04■□□□□ 0.32
EIF3F-202ENST00000528653 RFX5P48382 616 aaPredicted RBP17.04■□□□□ 0.32
EIF3F-202ENST00000528653 ATP8B2P98198 1209 aa17.04■□□□□ 0.32
EIF3F-202ENST00000528653 A0A1B0GUL6 1792 aa17.04■□□□□ 0.32
EIF3F-202ENST00000528653 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
EIF3F-202ENST00000528653 PA2G4Q9UQ80 394 aaKnown RBP17.03■□□□□ 0.32
EIF3F-202ENST00000528653 C21orf2O43822 256 aa17.02■□□□□ 0.32
EIF3F-202ENST00000528653 BBOX1O75936 387 aa17.02■□□□□ 0.32
EIF3F-202ENST00000528653 PTPN12Q05209 780 aaKnown RBP17.02■□□□□ 0.32
EIF3F-202ENST00000528653 POLA2Q14181 598 aa17.02■□□□□ 0.32
EIF3F-202ENST00000528653 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.32
EIF3F-202ENST00000528653 RPAP2Q8IXW5 612 aaPredicted RBP17.02■□□□□ 0.32
EIF3F-202ENST00000528653 SSH3Q8TE77 659 aa17.02■□□□□ 0.32
EIF3F-202ENST00000528653 MPHOSPH8Q99549 860 aa17.02■□□□□ 0.32
EIF3F-202ENST00000528653 SIL1Q9H173 461 aa17.02■□□□□ 0.32
EIF3F-202ENST00000528653 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
EIF3F-202ENST00000528653 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.312e-18■□□□□ 10.2
EIF3F-202ENST00000528653 AAMPQ13685 434 aa17.01■□□□□ 0.31
EIF3F-202ENST00000528653 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
EIF3F-202ENST00000528653 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
EIF3F-202ENST00000528653 PUS3Q9BZE2 481 aaKnown RBP17.01■□□□□ 0.31
EIF3F-202ENST00000528653 CNNM1Q9NRU3 951 aa17.01■□□□□ 0.31
EIF3F-202ENST00000528653 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
EIF3F-202ENST00000528653 HMMRO75330 724 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms