RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PI4KAP1Q8N8J0 262 aa24.05■■□□□ 1.44
SPIDR-220ENST00000522900 STK31Q9BXU1 1019 aa24.05■■□□□ 1.44
SPIDR-220ENST00000522900 TMX4Q9H1E5 349 aaPredicted RBP24.05■■□□□ 1.44
SPIDR-220ENST00000522900 SLC4A2P04920 1241 aa24.04■■□□□ 1.44
SPIDR-220ENST00000522900 KSR2Q6VAB6 950 aa24.04■■□□□ 1.44
SPIDR-220ENST00000522900 CCDC191Q8NCU4 936 aa24.04■■□□□ 1.44
SPIDR-220ENST00000522900 CELF1Q92879 486 aaKnown RBP24.04■■□□□ 1.44
SPIDR-220ENST00000522900 RTFDC1Q9BY42 306 aaPredicted RBP24.04■■□□□ 1.44
SPIDR-220ENST00000522900 EXOSC9Q06265 439 aaKnown RBP24.03■■□□□ 1.44
SPIDR-220ENST00000522900 AOC3Q16853 763 aa24.03■■□□□ 1.44
SPIDR-220ENST00000522900 DPP8Q6V1X1 898 aaPredicted RBP24.03■■□□□ 1.44
SPIDR-220ENST00000522900 MPNDQ8N594 471 aa24.03■■□□□ 1.44
SPIDR-220ENST00000522900 TAF1DQ9H5J8 278 aaPredicted RBP24.03■■□□□ 1.44
SPIDR-220ENST00000522900 DDX60Q8IY21 1712 aaKnown RBP24.02■■□□□ 1.44
SPIDR-220ENST00000522900 IQCA1LA6NCM1 817 aa24.02■■□□□ 1.44
SPIDR-220ENST00000522900 PPIP5K2O43314 1243 aa24.02■■□□□ 1.44
SPIDR-220ENST00000522900 VAMP4O75379 141 aa24.02■■□□□ 1.44
SPIDR-220ENST00000522900 PCCAP05165 728 aaPredicted RBP24.02■■□□□ 1.44
SPIDR-220ENST00000522900 IGKV5-2P06315 115 aa24.02■■□□□ 1.44
SPIDR-220ENST00000522900 CWC25Q9NXE8 425 aaPredicted RBP24.02■■□□□ 1.44
SPIDR-220ENST00000522900 EIF6P56537 245 aaKnown RBP24.01■■□□□ 1.43
SPIDR-220ENST00000522900 GPC2Q8N158 579 aa24.01■■□□□ 1.43
SPIDR-220ENST00000522900 GJA3Q9Y6H8 435 aa24.01■■□□□ 1.43
SPIDR-220ENST00000522900 TAF1P21675 1872 aa24■■□□□ 1.43
SPIDR-220ENST00000522900 COL4A1P02462 1669 aa24■■□□□ 1.43
SPIDR-220ENST00000522900 CHADLQ6NUI6 762 aa24■■□□□ 1.43
SPIDR-220ENST00000522900 NIM1KQ8IY84 436 aa24■■□□□ 1.43
SPIDR-220ENST00000522900 SUPT20HQ8NEM7 779 aa23.99■■□□□ 1.43
SPIDR-220ENST00000522900 SEC31BQ9NQW1 1179 aa23.99■■□□□ 1.43
SPIDR-220ENST00000522900 HACL1Q9UJ83 578 aa23.99■■□□□ 1.43
SPIDR-220ENST00000522900 CWF19L2Q2TBE0 894 aaKnown RBP23.98■■□□□ 1.43
SPIDR-220ENST00000522900 TMC4Q7Z404 712 aa23.98■■□□□ 1.43
SPIDR-220ENST00000522900 CCDC85AQ96PX6 553 aaPredicted RBP23.98■■□□□ 1.43
SPIDR-220ENST00000522900 VPS33BQ9H267 617 aa23.98■■□□□ 1.43
SPIDR-220ENST00000522900 EPHX2P34913 555 aa23.97■■□□□ 1.43
SPIDR-220ENST00000522900 RPS8P62241 208 aaKnown RBP23.97■■□□□ 1.43
SPIDR-220ENST00000522900 FLIIQ13045 1269 aa23.97■■□□□ 1.43
SPIDR-220ENST00000522900 EAPPQ56P03 285 aaPredicted RBP23.97■■□□□ 1.43
SPIDR-220ENST00000522900 PDE8AO60658 829 aa23.96■■□□□ 1.43
SPIDR-220ENST00000522900 KIAA2012Q0VF49 1180 aa23.96■■□□□ 1.43
SPIDR-220ENST00000522900 NEURL1BA8MQ27 555 aa23.95■■□□□ 1.42
SPIDR-220ENST00000522900 GPSM2P81274 684 aa23.95■■□□□ 1.42
SPIDR-220ENST00000522900 CXCL9Q07325 125 aa23.95■■□□□ 1.42
SPIDR-220ENST00000522900 NEXNQ0ZGT2 675 aa23.95■■□□□ 1.42
SPIDR-220ENST00000522900 LDHDQ86WU2 507 aa23.95■■□□□ 1.42
SPIDR-220ENST00000522900 ZNRF3Q9ULT6 936 aa23.95■■□□□ 1.42
SPIDR-220ENST00000522900 NSFL1CQ9UNZ2 370 aaKnown RBP23.95■■□□□ 1.42
SPIDR-220ENST00000522900 HSP90B1P14625 803 aaKnown RBP23.94■■□□□ 1.42
SPIDR-220ENST00000522900 SCNN1DP51172 638 aa23.94■■□□□ 1.42
SPIDR-220ENST00000522900 MYH16Q9H6N6 1097 aa23.94■■□□□ 1.42
SPIDR-220ENST00000522900 ZNF521Q96K83 1311 aa23.93■■□□□ 1.42
SPIDR-220ENST00000522900 CDHR2Q9BYE9 1310 aa23.93■■□□□ 1.42
SPIDR-220ENST00000522900 EPS15P42566 896 aa23.93■■□□□ 1.42
SPIDR-220ENST00000522900 FKBP5Q13451 457 aaPredicted RBP23.93■■□□□ 1.42
SPIDR-220ENST00000522900 POLLQ9UGP5 575 aa23.93■■□□□ 1.42
SPIDR-220ENST00000522900 CLEC11AQ9Y240 323 aa23.93■■□□□ 1.42
SPIDR-220ENST00000522900 DUOX1Q9NRD9 1551 aa23.92■■□□□ 1.42
SPIDR-220ENST00000522900 SCN4AP35499 1836 aa23.92■■□□□ 1.42
SPIDR-220ENST00000522900 H7C1W4 665 aa23.92■■□□□ 1.42
SPIDR-220ENST00000522900 CCDC152Q4G0S7 254 aa23.92■■□□□ 1.42
SPIDR-220ENST00000522900 C6orf229H3BNL8 230 aa23.91■■□□□ 1.42
SPIDR-220ENST00000522900 RAD17O75943 681 aa23.91■■□□□ 1.42
SPIDR-220ENST00000522900 KLRG1Q96E93 195 aa23.91■■□□□ 1.42
SPIDR-220ENST00000522900 GPR101Q96P66 508 aaPredicted RBP23.91■■□□□ 1.42
SPIDR-220ENST00000522900 YDJCA8MPS7 323 aa23.9■■□□□ 1.42
SPIDR-220ENST00000522900 RIMBP2O15034 1052 aa23.9■■□□□ 1.42
SPIDR-220ENST00000522900 ITGBL1O95965 494 aaPredicted RBP23.9■■□□□ 1.42
SPIDR-220ENST00000522900 CTSWP56202 376 aa23.9■■□□□ 1.42
SPIDR-220ENST00000522900 WASHC4Q2M389 1173 aa23.9■■□□□ 1.42
SPIDR-220ENST00000522900 UBE3BQ7Z3V4 1068 aa23.9■■□□□ 1.42
SPIDR-220ENST00000522900 PNMA8AQ86V59 439 aaPredicted RBP23.9■■□□□ 1.42
SPIDR-220ENST00000522900 TTLL11Q8NHH1 800 aa23.9■■□□□ 1.42
SPIDR-220ENST00000522900 DNAAF4Q8WXU2 420 aa23.9■■□□□ 1.42
SPIDR-220ENST00000522900 LMOD1P29536 600 aaPredicted RBP23.89■■□□□ 1.41
SPIDR-220ENST00000522900 GCKRQ14397 625 aa23.89■■□□□ 1.41
SPIDR-220ENST00000522900 MAP1SQ66K74 1059 aaPredicted RBP23.89■■□□□ 1.41
SPIDR-220ENST00000522900 TBC1D16Q8TBP0 767 aa23.89■■□□□ 1.41
SPIDR-220ENST00000522900 LRRC37AA6NMS7 1700 aa23.89■■□□□ 1.41
SPIDR-220ENST00000522900 LTBP1Q14766 1721 aa23.88■■□□□ 1.41
SPIDR-220ENST00000522900 F6X3S4 739 aa23.88■■□□□ 1.41
SPIDR-220ENST00000522900 CIAPIN1Q6FI81 312 aa23.88■■□□□ 1.41
SPIDR-220ENST00000522900 PASKQ96RG2 1323 aa23.87■■□□□ 1.41
SPIDR-220ENST00000522900 GMPSP49915 693 aaPredicted RBP23.87■■□□□ 1.41
SPIDR-220ENST00000522900 CASP7P55210 303 aa23.87■■□□□ 1.41
SPIDR-220ENST00000522900 LINS1Q8NG48 757 aa23.87■■□□□ 1.41
SPIDR-220ENST00000522900 GREM2Q9H772 168 aa23.87■■□□□ 1.41
SPIDR-220ENST00000522900 DBNDD1Q9H9R9 158 aa23.87■■□□□ 1.41
SPIDR-220ENST00000522900 DOK7Q18PE1 504 aa23.86■■□□□ 1.41
SPIDR-220ENST00000522900 ANKRD18AQ8IVF6 992 aa23.86■■□□□ 1.41
SPIDR-220ENST00000522900 CNTROBQ8N137 903 aa23.86■■□□□ 1.41
SPIDR-220ENST00000522900 PODXL2Q9NZ53 605 aa23.86■■□□□ 1.41
SPIDR-220ENST00000522900 GPRC5DQ9NZD1 345 aa23.86■■□□□ 1.41
SPIDR-220ENST00000522900 KCNQ5Q9NR82 932 aa23.85■■□□□ 1.41
SPIDR-220ENST00000522900 ANKIB1Q9P2G1 1089 aa23.85■■□□□ 1.41
SPIDR-220ENST00000522900 ADAMTSL1Q8N6G6 1762 aa23.85■■□□□ 1.41
SPIDR-220ENST00000522900 TNIP1Q15025 636 aa23.84■■□□□ 1.41
SPIDR-220ENST00000522900 JMYQ8N9B5 988 aa23.84■■□□□ 1.41
SPIDR-220ENST00000522900 EYA3Q99504 573 aa23.84■■□□□ 1.41
SPIDR-220ENST00000522900 WTIPA6NIX2 430 aaPredicted RBP23.83■■□□□ 1.41
SPIDR-220ENST00000522900 UFL1O94874 794 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms