RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 PPP1R1BQ9UD71 204 aaPredicted RBP7.98□□□□□ -1.13
IGHV4-55-201ENST00000520889 FBXO3Q9UK99 471 aa7.98□□□□□ -1.13
IGHV4-55-201ENST00000520889 TNNQ9UQP3 1299 aa7.98□□□□□ -1.13
IGHV4-55-201ENST00000520889 LRRC37AA6NMS7 1700 aa7.98□□□□□ -1.13
IGHV4-55-201ENST00000520889 BBOX1O75936 387 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 CTSWP56202 376 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 FOXO4P98177 505 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 ERICH6BQ5W0A0 696 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 RPAP2Q8IXW5 612 aaPredicted RBP7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 KAZALD1Q96I82 304 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 MEIS3Q99687 375 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 SYT17Q9BSW7 474 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 COG6Q9Y2V7 657 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 CACNA1SQ13698 1873 aa7.97□□□□□ -1.13
IGHV4-55-201ENST00000520889 FAM177BA6PVY3 158 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 HCLS1P14317 486 aaPredicted RBP7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 GRAPQ13588 217 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 C20orf194Q5TEA3 1177 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 CC2D2BQ6DHV5 1058 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 DDX46Q7L014 1031 aaKnown RBP7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 C2CD5Q86YS7 1000 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 SYNE4Q8N205 404 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 ANKRD44Q8N8A2 993 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 GRAPLQ8TC17 118 aaPredicted RBP7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 RPGRQ92834 1020 aaKnown RBP7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 SUCLG2Q96I99 432 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 CDC5LQ99459 802 aaKnown RBP7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 FHDC1Q9C0D6 1143 aaPredicted RBP7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 PIM2Q9P1W9 311 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 TAF1P21675 1872 aa7.96□□□□□ -1.14
IGHV4-55-201ENST00000520889 A0A1B0GUL6 1792 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 SLX4Q8IY92 1834 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 ANKRD18BA2A2Z9 1011 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 KCNA3P22001 575 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 ATP8B2P98198 1209 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 IFIT5Q13325 482 aaKnown RBP7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 EPHA10Q5JZY3 1008 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 SOGA3Q5TF21 947 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 LMBR1LQ6UX01 489 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 TTLL6Q8N841 843 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 SSH3Q8TE77 659 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 BICC1Q9H694 974 aaKnown RBP7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 LRRFIP2Q9Y608 721 aaKnown RBP7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 FER1L6Q2WGJ9 1857 aa7.95□□□□□ -1.14
IGHV4-55-201ENST00000520889 SPEF2Q9C093 1822 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 HMMRO75330 724 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 DPEP1P16444 411 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 ITGA6P23229 1130 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 RFX5P48382 616 aaPredicted RBP7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 RPS8P62241 208 aaKnown RBP7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 POLA2Q14181 598 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 CCDC57Q2TAC2 916 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 RTL5Q5HYW3 569 aaPredicted RBP7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 SP8Q8IXZ3 490 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 BSDC1Q9NW68 430 aaPredicted RBP7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 LTBP1Q14766 1721 aa7.94□□□□□ -1.14
IGHV4-55-201ENST00000520889 CIAO1O76071 339 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 IGHMBP2P38935 993 aaKnown RBP7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 DALRD3Q5D0E6 543 aaKnown RBP7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 CEP85Q6P2H3 762 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 C3orf67Q6ZVT6 689 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 ANKRD18AQ8IVF6 992 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 JARID2Q92833 1246 aaPredicted RBP7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 CRBNQ96SW2 442 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 VPS33BQ9H267 617 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 GREM2Q9H772 168 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 NOP58Q9Y2X3 529 aaKnown RBP7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 ATP6V0A2Q9Y487 856 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 DICER1Q9UPY3 1922 aaKnown RBP7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 SNED1Q8TER0 1413 aa7.93□□□□□ -1.14
IGHV4-55-201ENST00000520889 A0A0G2JLW4 131 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 ZBTB22O15209 634 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 SRGAP3O43295 1099 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 NEFLP07196 543 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 CHRNA5P30532 468 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 PTPN12Q05209 780 aaKnown RBP7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 FAM161AQ3B820 660 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 HSP90AB4PQ58FF6 505 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 PRPF40BQ6NWY9 871 aaKnown RBP7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 RTKN2Q8IZC4 609 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 NLGN2Q8NFZ4 835 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 C7orf43Q8WVR3 580 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 ZNF622Q969S3 477 aaKnown RBP eCLIP7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 MPHOSPH8Q99549 860 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 ANKRD2Q9GZV1 360 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 TMX4Q9H1E5 349 aaPredicted RBP7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 PODXL2Q9NZ53 605 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 MROH5Q6ZUA9 1318 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 LTBP3Q9NS15 1303 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 SBF1O95248 1867 aa7.92□□□□□ -1.14
IGHV4-55-201ENST00000520889 EYA2O00167 538 aa7.91□□□□□ -1.14
IGHV4-55-201ENST00000520889 PPEF1O14829 653 aaPredicted RBP7.91□□□□□ -1.14
IGHV4-55-201ENST00000520889 GRIN3BO60391 1043 aa7.91□□□□□ -1.14
IGHV4-55-201ENST00000520889 IL15P40933 162 aaPredicted RBP7.91□□□□□ -1.14
IGHV4-55-201ENST00000520889 HDAC1Q13547 482 aaPredicted RBP7.91□□□□□ -1.14
IGHV4-55-201ENST00000520889 EXOC6Q8TAG9 804 aa7.91□□□□□ -1.14
IGHV4-55-201ENST00000520889 CELF1Q92879 486 aaKnown RBP7.91□□□□□ -1.14
IGHV4-55-201ENST00000520889 RTFDC1Q9BY42 306 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms