RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CCDC191Q8NCU4 936 aa11.69□□□□□ -0.54
PDLIM5-209ENST00000506632 ZNF428Q96B54 188 aa11.69□□□□□ -0.54
PDLIM5-209ENST00000506632 CEP350Q5VT06 3117 aa11.69□□□□□ -0.54
PDLIM5-209ENST00000506632 DUOX1Q9NRD9 1551 aa11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 TCERG1O14776 1098 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 DDX58O95786 925 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 KSR2Q6VAB6 950 aa11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 DNAJC5GQ8N7S2 189 aa11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 JDP2Q8WYK2 163 aa11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 MYD88Q99836 296 aa11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 STK31Q9BXU1 1019 aa11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 VPS33BQ9H267 617 aa11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-209ENST00000506632 ADAMTSL1Q8N6G6 1762 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 CACNA1FO60840 1977 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 PI4KAP2A4QPH2 592 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 IQCA1LA6NCM1 817 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 VAMP4O75379 141 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 RTL5Q5HYW3 569 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 G2E3Q7L622 706 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 FAM9BQ8IZU0 186 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 GPC2Q8N158 579 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 PI4KAP1Q8N8J0 262 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 TAF1DQ9H5J8 278 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 MAP3K2Q9Y2U5 619 aa11.67□□□□□ -0.54
PDLIM5-209ENST00000506632 LTBP1Q14766 1721 aa11.66□□□□□ -0.54
PDLIM5-209ENST00000506632 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
PDLIM5-209ENST00000506632 IGKV5-2P06315 115 aa11.66□□□□□ -0.54
PDLIM5-209ENST00000506632 SUPT20HQ8NEM7 779 aa11.66□□□□□ -0.54
PDLIM5-209ENST00000506632 CELF1Q92879 486 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-209ENST00000506632 TMX4Q9H1E5 349 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-209ENST00000506632 CWC25Q9NXE8 425 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-209ENST00000506632 SALL2Q9Y467 1007 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-209ENST00000506632 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 PPIP5K2O43314 1243 aa11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 HSP90B1P14625 803 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 EXOSC9Q06265 439 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 AOC3Q16853 763 aa11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 MPNDQ8N594 471 aa11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 HACL1Q9UJ83 578 aa11.65□□□□□ -0.54
PDLIM5-209ENST00000506632 PDE8AO60658 829 aa11.64□□□□□ -0.55
PDLIM5-209ENST00000506632 EIF6P56537 245 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-209ENST00000506632 HTRA3P83110 453 aa11.64□□□□□ -0.55
PDLIM5-209ENST00000506632 FLIIQ13045 1269 aa11.64□□□□□ -0.55
PDLIM5-209ENST00000506632 LDHDQ86WU2 507 aa11.64□□□□□ -0.55
PDLIM5-209ENST00000506632 NIM1KQ8IY84 436 aa11.64□□□□□ -0.55
PDLIM5-209ENST00000506632 NEURL1BA8MQ27 555 aa11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 EPHX2P34913 555 aa11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 SCNN1DP51172 638 aa11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 CWF19L2Q2TBE0 894 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 MYH16Q9H6N6 1097 aa11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 SEC31BQ9NQW1 1179 aa11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 ZNRF3Q9ULT6 936 aa11.63□□□□□ -0.55
PDLIM5-209ENST00000506632 PASKQ96RG2 1323 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 H7C1W4 665 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 CXCL9Q07325 125 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 NEXNQ0ZGT2 675 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 PNMA8AQ86V59 439 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 KLRG1Q96E93 195 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 GJA3Q9Y6H8 435 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 RTL9Q8NET4 1388 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 MYH3P11055 1940 aa11.62□□□□□ -0.55
PDLIM5-209ENST00000506632 YDJCA8MPS7 323 aa11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 CTSWP56202 376 aa11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 GPSM2P81274 684 aa11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 FKBP5Q13451 457 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 JMYQ8N9B5 988 aa11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 DNAAF4Q8WXU2 420 aa11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 POLLQ9UGP5 575 aa11.61□□□□□ -0.55
PDLIM5-209ENST00000506632 EPS15P42566 896 aa11.6□□□□□ -0.55
PDLIM5-209ENST00000506632 CASP7P55210 303 aa11.6□□□□□ -0.55
PDLIM5-209ENST00000506632 GCKRQ14397 625 aa11.6□□□□□ -0.55
PDLIM5-209ENST00000506632 EAPPQ56P03 285 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-209ENST00000506632 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
PDLIM5-209ENST00000506632 PLA2G12BQ9BX93 195 aa11.6□□□□□ -0.55
PDLIM5-209ENST00000506632 NSFL1CQ9UNZ2 370 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-209ENST00000506632 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-209ENST00000506632 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
PDLIM5-209ENST00000506632 CIAPIN1Q6FI81 312 aa11.59□□□□□ -0.55
PDLIM5-209ENST00000506632 UBE3BQ7Z3V4 1068 aa11.59□□□□□ -0.55
PDLIM5-209ENST00000506632 TBC1D16Q8TBP0 767 aa11.59□□□□□ -0.55
PDLIM5-209ENST00000506632 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
PDLIM5-209ENST00000506632 CCER2I3L3R5 266 aa11.58□□□□□ -0.56
PDLIM5-209ENST00000506632 RAD17O75943 681 aa11.58□□□□□ -0.56
PDLIM5-209ENST00000506632 BEND3Q5T5X7 828 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms