RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 BBOX1O75936 387 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 IGKV5-2P06315 115 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 VEGFAP15692 232 aaPredicted RBP18.22■□□□□ 0.51
HOXC9-202ENST00000504557 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 JDP2Q8WYK2 163 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
HOXC9-202ENST00000504557 SNED1Q8TER0 1413 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 COL4A5P29400 1685 aa18.22■□□□□ 0.51
HOXC9-202ENST00000504557 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
HOXC9-202ENST00000504557 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
HOXC9-202ENST00000504557 AOC3Q16853 763 aa18.21■□□□□ 0.51
HOXC9-202ENST00000504557 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
HOXC9-202ENST00000504557 DPP8Q6V1X1 898 aaPredicted RBP18.21■□□□□ 0.51
HOXC9-202ENST00000504557 ZNF521Q96K83 1311 aa18.21■□□□□ 0.51
HOXC9-202ENST00000504557 F6X3S4 739 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
HOXC9-202ENST00000504557 SP8Q8IXZ3 490 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 MPNDQ8N594 471 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 GJA3Q9Y6H8 435 aa18.2■□□□□ 0.5
HOXC9-202ENST00000504557 LRRC37AA6NMS7 1700 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 NEURL1BA8MQ27 555 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 PDE8AO60658 829 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 HSPA6P17066 643 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 UBE3BQ7Z3V4 1068 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 RBM46Q8TBY0 533 aaKnown RBP18.19■□□□□ 0.5
HOXC9-202ENST00000504557 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
HOXC9-202ENST00000504557 POTECB2RU33 542 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
HOXC9-202ENST00000504557 CCDC152Q4G0S7 254 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 GRIPAP1Q4V328 841 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 MIER1Q8N108 512 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 SCN4AP35499 1836 aa18.18■□□□□ 0.5
HOXC9-202ENST00000504557 EIF6P56537 245 aaKnown RBP18.17■□□□□ 0.5
HOXC9-202ENST00000504557 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
HOXC9-202ENST00000504557 E9PSI1 815 aa18.16■□□□□ 0.5
HOXC9-202ENST00000504557 FZD9O00144 591 aa18.16■□□□□ 0.5
HOXC9-202ENST00000504557 RPS8P62241 208 aaKnown RBP18.16■□□□□ 0.5
HOXC9-202ENST00000504557 SLC4A10Q6U841 1118 aa18.16■□□□□ 0.5
HOXC9-202ENST00000504557 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
HOXC9-202ENST00000504557 C6orf229H3BNL8 230 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 RIMBP2O15034 1052 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 CTSWP56202 376 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 GPSM2P81274 684 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 GCKRQ14397 625 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 EAPPQ56P03 285 aaPredicted RBP18.15■□□□□ 0.5
HOXC9-202ENST00000504557 SMC1BQ8NDV3 1235 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 BCL2L13Q9BXK5 485 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 CDHR2Q9BYE9 1310 aa18.15■□□□□ 0.5
HOXC9-202ENST00000504557 DUOX1Q9NRD9 1551 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 POTEIP0CG38 1075 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 POTEJP0CG39 1038 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 SLFN5Q08AF3 891 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 TMC4Q7Z404 712 aa18.14■□□□□ 0.49
HOXC9-202ENST00000504557 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
HOXC9-202ENST00000504557 IQCA1LA6NCM1 817 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 HTRA3P83110 453 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 ANKRD18AQ8IVF6 992 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 ANKIB1Q9P2G1 1089 aa18.13■□□□□ 0.49
HOXC9-202ENST00000504557 H7C1W4 665 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 FSTL1Q12841 308 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 GPC2Q8N158 579 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 RTFDC1Q9BY42 306 aaPredicted RBP18.12■□□□□ 0.49
HOXC9-202ENST00000504557 GREM2Q9H772 168 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 HACL1Q9UJ83 578 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 CLEC11AQ9Y240 323 aa18.12■□□□□ 0.49
HOXC9-202ENST00000504557 TTLL11Q8NHH1 800 aa18.11■□□□□ 0.49
HOXC9-202ENST00000504557 L3MBTL3Q96JM7 780 aaPredicted RBP18.11■□□□□ 0.49
HOXC9-202ENST00000504557 TAF1DQ9H5J8 278 aaPredicted RBP18.11■□□□□ 0.49
HOXC9-202ENST00000504557 POLLQ9UGP5 575 aa18.11■□□□□ 0.49
HOXC9-202ENST00000504557 CHMP3Q9Y3E7 222 aa18.11■□□□□ 0.49
HOXC9-202ENST00000504557 LTBP1Q14766 1721 aa18.11■□□□□ 0.49
HOXC9-202ENST00000504557 RAD17O75943 681 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 LMOD1P29536 600 aaPredicted RBP18.1■□□□□ 0.49
HOXC9-202ENST00000504557 APLP1P51693 650 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 KIAA2012Q0VF49 1180 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 WASHC4Q2M389 1173 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 CDC5LQ99459 802 aaKnown RBP18.1■□□□□ 0.49
HOXC9-202ENST00000504557 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 ZNRF3Q9ULT6 936 aa18.1■□□□□ 0.49
HOXC9-202ENST00000504557 UFL1O94874 794 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 EPHX2P34913 555 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 DOK7Q18PE1 504 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
HOXC9-202ENST00000504557 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
HOXC9-202ENST00000504557 G3V3G9 751 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 CXCL9Q07325 125 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 DCAF8Q5TAQ9 597 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 TBC1D16Q8TBP0 767 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 VPS33BQ9H267 617 aa18.08■□□□□ 0.48
HOXC9-202ENST00000504557 C9orf78Q9NZ63 289 aaPredicted RBP18.08■□□□□ 0.48
HOXC9-202ENST00000504557 EPS15P42566 896 aa18.07■□□□□ 0.48
HOXC9-202ENST00000504557 CASP7P55210 303 aa18.07■□□□□ 0.48
HOXC9-202ENST00000504557 CIAPIN1Q6FI81 312 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms