RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
CPNE1-227ENST00000498056 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
CPNE1-227ENST00000498056 NLRP3Q96P20 1036 aa16.98■□□□□ 0.31
CPNE1-227ENST00000498056 PLA2G12BQ9BX93 195 aa16.98■□□□□ 0.31
CPNE1-227ENST00000498056 FOXO4P98177 505 aa16.97■□□□□ 0.31
CPNE1-227ENST00000498056 ANKRD44Q8N8A2 993 aa16.97■□□□□ 0.31
CPNE1-227ENST00000498056 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
CPNE1-227ENST00000498056 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
CPNE1-227ENST00000498056 PDE6BP35913 854 aa16.96■□□□□ 0.31
CPNE1-227ENST00000498056 CCDC152Q4G0S7 254 aa16.96■□□□□ 0.31
CPNE1-227ENST00000498056 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
CPNE1-227ENST00000498056 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
CPNE1-227ENST00000498056 RABL6Q3YEC7 729 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-227ENST00000498056 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
CPNE1-227ENST00000498056 GREM2Q9H772 168 aa16.95■□□□□ 0.3
CPNE1-227ENST00000498056 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
CPNE1-227ENST00000498056 TTLL11Q8NHH1 800 aa16.94■□□□□ 0.3
CPNE1-227ENST00000498056 ARAP2Q8WZ64 1704 aa16.93■□□□□ 0.3
CPNE1-227ENST00000498056 RTL9Q8NET4 1388 aa16.93■□□□□ 0.3
CPNE1-227ENST00000498056 SRGAP3O43295 1099 aa16.93■□□□□ 0.3
CPNE1-227ENST00000498056 CHRNA5P30532 468 aa16.93■□□□□ 0.3
CPNE1-227ENST00000498056 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
CPNE1-227ENST00000498056 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
CPNE1-227ENST00000498056 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
CPNE1-227ENST00000498056 MYH13Q9UKX3 1938 aa16.93■□□□□ 0.3
CPNE1-227ENST00000498056 PNMA6EA0A0J9YXQ4 647 aa16.92■□□□□ 0.3
CPNE1-227ENST00000498056 H0YIN7 160 aa16.92■□□□□ 0.3
CPNE1-227ENST00000498056 ITGA6P23229 1130 aa16.92■□□□□ 0.3
CPNE1-227ENST00000498056 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
CPNE1-227ENST00000498056 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
CPNE1-227ENST00000498056 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
CPNE1-227ENST00000498056 FHDC1Q9C0D6 1143 aaPredicted RBP16.92■□□□□ 0.3
CPNE1-227ENST00000498056 LTBP1Q14766 1721 aa16.92■□□□□ 0.3
CPNE1-227ENST00000498056 ANKRD18BA2A2Z9 1011 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 CSF1RP07333 972 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 SRGNP10124 158 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 NPR1P16066 1061 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 MTX1Q13505 466 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 AAMPQ13685 434 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 ZNF622Q969S3 477 aaKnown RBP eCLIP16.91■□□□□ 0.3
CPNE1-227ENST00000498056 MASTLQ96GX5 879 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 RBM17Q96I25 401 aaKnown RBP16.91■□□□□ 0.3
CPNE1-227ENST00000498056 SEC31BQ9NQW1 1179 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 CD2APQ9Y5K6 639 aa16.91■□□□□ 0.3
CPNE1-227ENST00000498056 DPEP1P16444 411 aa16.9■□□□□ 0.3
CPNE1-227ENST00000498056 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
CPNE1-227ENST00000498056 CDC5LQ99459 802 aaKnown RBP16.9■□□□□ 0.3
CPNE1-227ENST00000498056 WWC3Q9ULE0 1092 aa16.9■□□□□ 0.3
CPNE1-227ENST00000498056 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
CPNE1-227ENST00000498056 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
CPNE1-227ENST00000498056 CCDC88AQ3V6T2 1871 aa16.9■□□□□ 0.3
CPNE1-227ENST00000498056 FER1L6Q2WGJ9 1857 aa16.89■□□□□ 0.29
CPNE1-227ENST00000498056 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
CPNE1-227ENST00000498056 KLRG2A4D1S0 409 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-227ENST00000498056 HMMRO75330 724 aa16.89■□□□□ 0.29
CPNE1-227ENST00000498056 RPAP2Q8IXW5 612 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-227ENST00000498056 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
CPNE1-227ENST00000498056 ZNF594Q96JF6 807 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-227ENST00000498056 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
CPNE1-227ENST00000498056 TGFB2P61812 414 aa16.88■□□□□ 0.29
CPNE1-227ENST00000498056 ATP8B2P98198 1209 aa16.88■□□□□ 0.29
CPNE1-227ENST00000498056 GRAPQ13588 217 aa16.88■□□□□ 0.29
CPNE1-227ENST00000498056 STYK1Q6J9G0 422 aa16.88■□□□□ 0.29
CPNE1-227ENST00000498056 ANKRD18AQ8IVF6 992 aa16.88■□□□□ 0.29
CPNE1-227ENST00000498056 GRAPLQ8TC17 118 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-227ENST00000498056 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
CPNE1-227ENST00000498056 SIL1Q9H173 461 aa16.88■□□□□ 0.29
CPNE1-227ENST00000498056 PA2G4Q9UQ80 394 aaKnown RBP16.88■□□□□ 0.29
CPNE1-227ENST00000498056 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-227ENST00000498056 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
CPNE1-227ENST00000498056 RFX5P48382 616 aaPredicted RBP16.86■□□□□ 0.29
CPNE1-227ENST00000498056 POLA2Q14181 598 aa16.86■□□□□ 0.29
CPNE1-227ENST00000498056 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
CPNE1-227ENST00000498056 SIRT2Q8IXJ6 389 aa16.86■□□□□ 0.29
CPNE1-227ENST00000498056 SSH3Q8TE77 659 aa16.86■□□□□ 0.29
CPNE1-227ENST00000498056 CRAMP1Q96RY5 1269 aa16.86■□□□□ 0.29
CPNE1-227ENST00000498056 MPHOSPH8Q99549 860 aa16.86■□□□□ 0.29
CPNE1-227ENST00000498056 PTPN12Q05209 780 aaKnown RBP16.85■□□□□ 0.29
CPNE1-227ENST00000498056 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
CPNE1-227ENST00000498056 CNKSR1Q969H4 720 aa16.85■□□□□ 0.29
CPNE1-227ENST00000498056 CNNM1Q9NRU3 951 aa16.85■□□□□ 0.29
CPNE1-227ENST00000498056 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
CPNE1-227ENST00000498056 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
CPNE1-227ENST00000498056 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
CPNE1-227ENST00000498056 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
CPNE1-227ENST00000498056 PIM2Q9P1W9 311 aa16.84■□□□□ 0.29
CPNE1-227ENST00000498056 EXOC6BQ9Y2D4 811 aa16.84■□□□□ 0.29
CPNE1-227ENST00000498056 APBB1O00213 710 aa16.83■□□□□ 0.28
CPNE1-227ENST00000498056 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
CPNE1-227ENST00000498056 RPS8P62241 208 aaKnown RBP16.83■□□□□ 0.28
CPNE1-227ENST00000498056 LDHAL6AQ6ZMR3 332 aa16.83■□□□□ 0.28
CPNE1-227ENST00000498056 TIAM2Q8IVF5 1701 aa16.83■□□□□ 0.28
CPNE1-227ENST00000498056 TTLL6Q8N841 843 aa16.83■□□□□ 0.28
CPNE1-227ENST00000498056 SYT17Q9BSW7 474 aa16.83■□□□□ 0.28
CPNE1-227ENST00000498056 PUS3Q9BZE2 481 aaKnown RBP16.83■□□□□ 0.28
CPNE1-227ENST00000498056 COPRSQ9NQ92 184 aa16.83■□□□□ 0.28
CPNE1-227ENST00000498056 KCNA3P22001 575 aa16.82■□□□□ 0.28
CPNE1-227ENST00000498056 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-227ENST00000498056 LRRC24Q50LG9 513 aa16.82■□□□□ 0.28
CPNE1-227ENST00000498056 DICER1Q9UPY3 1922 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms